DY257628

Overview
NameDY257628
Unique NameDY257628
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length802
Libraries
Library NameType
AbsCFruitcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig6640 contig Csv1_Contig6640:1..803. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of DY257628 vs. ExPASy Swiss-Prot
Match: SPOPL_HUMAN (Speckle-type POZ protein-like OS=Homo sapiens GN=SPOPL PE=2 SV=1)

HSP 1 Score: 123.25 bits (308), Expect = 1.618e-27
Identity = 71/200 (35.50%), Postives = 108/200 (54.00%), Query Frame = 3
Query:    6 KQFGKLLEGGRFTDVNFEVDGERFAAHKLVLATRSPVFKAQLFGPLKDQNTQCIKVEDMEVPVFKALLHFIYWDALPDMEDLVDLSPKWASTLMAQHLLAAADRYALERLKLLCEAKLCEDVAINTVATTLALAEQHHCSQLKAVCLKFIASPENLKA----------------VMQTDGFEYLKESCPSVLTELLQYVA 557
            +  G L E  RFTD +F V G+ F AHK VLA RSPVF A     +++     +++ D++  VFK ++ FIY    P+++             MA +LLAAAD+YALERLK++CE  LC ++++  VA TL LA+ H   QLKA  + FI     L+                 +M+T G++ + +S P ++ E  + +A
Sbjct:  188 EDLGNLWENTRFTDCSFFVRGQEFKAHKSVLAARSPVFNAMFEHEMEESKKNRVEINDLDPEVFKEMMRFIYTGRAPNLDK------------MADNLLAAADKYALERLKVMCEEALCSNLSVENVADTLVLADLHSAEQLKAQAIDFINRCSVLRQLGCKDGKNWNSNQATDIMETSGWKSMIQSHPHLVAEAFRALA 375          
BLAST of DY257628 vs. ExPASy Swiss-Prot
Match: SPOPL_MOUSE (Speckle-type POZ protein-like OS=Mus musculus GN=Spopl PE=2 SV=2)

HSP 1 Score: 119.783 bits (299), Expect = 1.789e-26
Identity = 70/200 (35.00%), Postives = 107/200 (53.50%), Query Frame = 3
Query:    6 KQFGKLLEGGRFTDVNFEVDGERFAAHKLVLATRSPVFKAQLFGPLKDQNTQCIKVEDMEVPVFKALLHFIYWDALPDMEDLVDLSPKWASTLMAQHLLAAADRYALERLKLLCEAKLCEDVAINTVATTLALAEQHHCSQLKAVCLKFIASPENLKA----------------VMQTDGFEYLKESCPSVLTELLQYVA 557
            +  G L E  RFTD  F V G+ F AHK VLA RSPVF A     +++     +++ D++  VFK ++ F+Y    P+++             MA +LLAAAD+YALERLK++CE  LC ++++  VA TL LA+ H   QLKA  + FI     L+                 +M+T G++ + +S P ++ E  + +A
Sbjct:  188 EDLGNLWENTRFTDCCFFVRGKEFKAHKSVLAARSPVFNAMFEHEMEECTKNRVEINDLDPEVFKEMMRFVYTGKAPNLDK------------MADNLLAAADKYALERLKVMCEEALCSNLSVENVADTLVLADLHSAEQLKAQAIDFINRCSVLRQLGCKDGKNWNNNQATDIMETSGWKSMIQSHPHLVAEAFRALA 375          
BLAST of DY257628 vs. ExPASy Swiss-Prot
Match: SPOLB_DANRE (Speckle-type POZ protein-like B OS=Danio rerio GN=spoplb PE=2 SV=2)

HSP 1 Score: 119.783 bits (299), Expect = 1.789e-26
Identity = 71/197 (36.04%), Postives = 104/197 (52.79%), Query Frame = 3
Query:   15 GKLLEGGRFTDVNFEVDGERFAAHKLVLATRSPVFKAQLFGPLKDQNTQCIKVEDMEVPVFKALLHFIYWDALPDMEDLVDLSPKWASTLMAQHLLAAADRYALERLKLLCEAKLCEDVAINTVATTLALAEQHHCSQLKAVCLKFIASPENLKA----------------VMQTDGFEYLKESCPSVLTELLQYVA 557
            G L EG RFTD +  V G+ F AHK +LA RSPVF A     +++     + + D+E  VF+ ++ FIY    P++E             MA +LLAAAD+YALERLK+LCE  LC  +++  VA  L LA+ H   QLKA  + FI     L+                 +M+T G++ + +S P ++ E  + +A
Sbjct:  191 GNLWEGSRFTDCSLFVGGQEFKAHKSILAARSPVFNAMFEHKMEESKKNRVDISDVEPDVFREMMVFIYTGKAPNLEK------------MADNLLAAADKYALERLKVLCEEALCNSLSVENVADVLILADLHSAEQLKAQAIDFINRCSVLRQLGCKDGKNWNSNHAADIMETAGWKAMIQSHPHLVAEAFRALA 375          
BLAST of DY257628 vs. ExPASy Swiss-Prot
Match: SPOLA_DANRE (Speckle-type POZ protein-like A OS=Danio rerio GN=spopla PE=2 SV=1)

HSP 1 Score: 118.627 bits (296), Expect = 3.986e-26
Identity = 71/197 (36.04%), Postives = 103/197 (52.28%), Query Frame = 3
Query:   15 GKLLEGGRFTDVNFEVDGERFAAHKLVLATRSPVFKAQLFGPLKDQNTQCIKVEDMEVPVFKALLHFIYWDALPDMEDLVDLSPKWASTLMAQHLLAAADRYALERLKLLCEAKLCEDVAINTVATTLALAEQHHCSQLKAVCLKFIASPENLKA----------------VMQTDGFEYLKESCPSVLTELLQYVA 557
            G L E  RFTD +  V G+ F AHK +LA RSPVF A     +++     + + D+E  VFK ++ FIY    P++E             MA  LLAAAD+YALERLK++CE  LC  +++  VA TL LA+ H   QLKA  + FI     L+                 +M+T G++ + +S P ++ E  + +A
Sbjct:  191 GNLWECSRFTDCSLYVGGQEFKAHKSILAARSPVFNAMFEHEMEESKKNRVDISDVEPEVFKEMMGFIYTGKAPNLEK------------MADSLLAAADKYALERLKVMCEEALCNSLSVENVADTLILADLHSAEQLKAQAIDFINRCSVLRQLGCKDGKNWNSNHATDIMETAGWKSMIQSHPHLVAEAFRALA 375          
BLAST of DY257628 vs. ExPASy Swiss-Prot
Match: SPOPL_XENLA (Speckle-type POZ protein-like OS=Xenopus laevis GN=spopl PE=2 SV=1)

HSP 1 Score: 117.472 bits (293), Expect = 8.881e-26
Identity = 68/200 (34.00%), Postives = 103/200 (51.50%), Query Frame = 3
Query:    6 KQFGKLLEGGRFTDVNFEVDGERFAAHKLVLATRSPVFKAQLFGPLKDQNTQCIKVEDMEVPVFKALLHFIYWDALPDMEDLVDLSPKWASTLMAQHLLAAADRYALERLKLLCEAKLCEDVAINTVATTLALAEQHHCSQLKAVCLKFI----------------ASPENLKAVMQTDGFEYLKESCPSVLTELLQYVA 557
            +  G L E  RFTD +  V+G+ F AHK +LA RSPVF A    P+++     + + D++  VFK ++ FIY    P ++             MA  LLAAAD+YALERLK++CE  LC ++ +  VA  L LA+ H   QLKA  + FI                 +      +M+T G++ + +S P ++ E  + +A
Sbjct:  188 EDMGYLWENRRFTDCSLFVEGKEFKAHKSILAARSPVFSAMFEHPMQESRKNRVYIRDVDPEVFKEMMRFIYTGGTPHVDK------------MADKLLAAADKYALERLKVMCEESLCNNLTVENVADVLILADLHSAEQLKAQAIDFINRCSVLGQLGCKDRKNCNSNQTMDIMETAGWKSMIKSHPHLVAEAFRALA 375          
BLAST of DY257628 vs. ExPASy Swiss-Prot
Match: SPOP_DANRE (Speckle-type POZ protein OS=Danio rerio GN=spop PE=2 SV=1)

HSP 1 Score: 117.087 bits (292), Expect = 1.160e-25
Identity = 67/183 (36.61%), Postives = 100/183 (54.64%), Query Frame = 3
Query:    9 QFGKLLEGGRFTDVNFEVDGERFAAHKLVLATRSPVFKAQLFGPLKDQNTQCIKVEDMEVPVFKALLHFIYWDALPDMEDLVDLSPKWASTLMAQHLLAAADRYALERLKLLCEAKLCEDVAINTVATTLALAEQHHCSQLKAVCLKFIASPENLKAVMQTDGFEYLKESCPSVLTELLQYVA 557
            + G L E  RFTD +  V G+ F AHK +LA RSPVF A     +++     +++ D+E  VFK ++ FIY    P+++             MA  LLAAAD+YALERLK++CE  LC  +++   A  L LA+ H   QLK   + FI    +   VM+T G++ +  S P ++ E  + +A
Sbjct:  189 ELGGLWEHSRFTDCSLCVAGQEFQAHKAILAARSPVFSAMFEHEMEESKKNRVEINDVEAEVFKEMMFFIYTGKAPNLDK------------MADDLLAAADKYALERLKVMCEDALCTSLSVENAAEILILADLHSADQLKTQAVDFI--NYHASDVMETSGWKSMVASHPHLVAEAYRSLA 357          
BLAST of DY257628 vs. ExPASy Swiss-Prot
Match: TDPZ2_MOUSE (TD and POZ domain-containing protein 2 OS=Mus musculus GN=Tdpoz2 PE=2 SV=1)

HSP 1 Score: 114.775 bits (286), Expect = 5.756e-25
Identity = 65/181 (35.91%), Postives = 101/181 (55.80%), Query Frame = 3
Query:   15 GKLLEGGRFTDVNFEVDGERFAAHKLVLATRSPVFKAQLFGPLKDQNTQCIKVEDMEVPVFKALLHFIYWDALPDMEDLVDLSPKWASTLMAQHLLAAADRYALERLKLLCEAKLCEDVAINTVATTLALAEQHHCSQLKAVCLKFIASPENLKAVMQTDGFEYLKESCPSVLTELLQYVA 557
            GKL E   FTD +  V G  F AHK++LA RSPVF+A     ++++   C ++++++  VFK ++ FIY    P +           S  MA  +LAAAD+Y LE LK++CE  LC ++++   A TL +A+ H   QLK   L FIA   +   V ++ G++ + ES P ++ E    +A
Sbjct:  179 GKLWENSLFTDCSLLVAGHEFRAHKVILAARSPVFRAMFEHQMEERLANCFEIQELDFQVFKEMMDFIYTGKAPTLH----------SHSMACDVLAAADKYGLEGLKVICEDSLCRNLSVENAAHTLIVADLHSTEQLKTRALHFIA--VHASEVSKSSGWKSMVESHPHLVDERFHSLA 347          
BLAST of DY257628 vs. ExPASy Swiss-Prot
Match: SPOP_PONAB (Speckle-type POZ protein OS=Pongo abelii GN=SPOP PE=1 SV=1)

HSP 1 Score: 114.005 bits (284), Expect = 9.819e-25
Identity = 66/183 (36.07%), Postives = 100/183 (54.64%), Query Frame = 3
Query:    9 QFGKLLEGGRFTDVNFEVDGERFAAHKLVLATRSPVFKAQLFGPLKDQNTQCIKVEDMEVPVFKALLHFIYWDALPDMEDLVDLSPKWASTLMAQHLLAAADRYALERLKLLCEAKLCEDVAINTVATTLALAEQHHCSQLKAVCLKFIASPENLKAVMQTDGFEYLKESCPSVLTELLQYVA 557
            + G L E  RFTD    V G+ F AHK +LA RSPVF A     +++     +++ D+E  VFK ++ FIY    P+++             MA  LLAAAD+YALERLK++CE  LC ++++   A  L LA+ H   QLK   + FI    +   V++T G++ +  S P ++ E  + +A
Sbjct:  189 ELGGLWENSRFTDCCLCVAGQEFQAHKAILAARSPVFSAMFEHEMEESKKNRVEINDVEPEVFKEMMCFIYTGKAPNLDK------------MADDLLAAADKYALERLKVMCEDALCSNLSVENAAEILILADLHSADQLKTQAVDFI--NYHASDVLETSGWKSMVVSHPHLVAEAYRSLA 357          
BLAST of DY257628 vs. ExPASy Swiss-Prot
Match: SPOP_MOUSE (Speckle-type POZ protein OS=Mus musculus GN=Spop PE=1 SV=1)

HSP 1 Score: 114.005 bits (284), Expect = 9.819e-25
Identity = 66/183 (36.07%), Postives = 100/183 (54.64%), Query Frame = 3
Query:    9 QFGKLLEGGRFTDVNFEVDGERFAAHKLVLATRSPVFKAQLFGPLKDQNTQCIKVEDMEVPVFKALLHFIYWDALPDMEDLVDLSPKWASTLMAQHLLAAADRYALERLKLLCEAKLCEDVAINTVATTLALAEQHHCSQLKAVCLKFIASPENLKAVMQTDGFEYLKESCPSVLTELLQYVA 557
            + G L E  RFTD    V G+ F AHK +LA RSPVF A     +++     +++ D+E  VFK ++ FIY    P+++             MA  LLAAAD+YALERLK++CE  LC ++++   A  L LA+ H   QLK   + FI    +   V++T G++ +  S P ++ E  + +A
Sbjct:  189 ELGGLWENSRFTDCCLCVAGQEFQAHKAILAARSPVFSAMFEHEMEESKKNRVEINDVEPEVFKEMMCFIYTGKAPNLDK------------MADDLLAAADKYALERLKVMCEDALCSNLSVENAAEILILADLHSADQLKTQAVDFI--NYHASDVLETSGWKSMVVSHPHLVAEAYRSLA 357          
BLAST of DY257628 vs. ExPASy Swiss-Prot
Match: SPOP_HUMAN (Speckle-type POZ protein OS=Homo sapiens GN=SPOP PE=1 SV=1)

HSP 1 Score: 114.005 bits (284), Expect = 9.819e-25
Identity = 66/183 (36.07%), Postives = 100/183 (54.64%), Query Frame = 3
Query:    9 QFGKLLEGGRFTDVNFEVDGERFAAHKLVLATRSPVFKAQLFGPLKDQNTQCIKVEDMEVPVFKALLHFIYWDALPDMEDLVDLSPKWASTLMAQHLLAAADRYALERLKLLCEAKLCEDVAINTVATTLALAEQHHCSQLKAVCLKFIASPENLKAVMQTDGFEYLKESCPSVLTELLQYVA 557
            + G L E  RFTD    V G+ F AHK +LA RSPVF A     +++     +++ D+E  VFK ++ FIY    P+++             MA  LLAAAD+YALERLK++CE  LC ++++   A  L LA+ H   QLK   + FI    +   V++T G++ +  S P ++ E  + +A
Sbjct:  189 ELGGLWENSRFTDCCLCVAGQEFQAHKAILAARSPVFSAMFEHEMEESKKNRVEINDVEPEVFKEMMCFIYTGKAPNLDK------------MADDLLAAADKYALERLKVMCEDALCSNLSVENAAEILILADLHSADQLKTQAVDFI--NYHASDVLETSGWKSMVVSHPHLVAEAYRSLA 357          
The following BLAST results are available for this feature:
BLAST of DY257628 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 21
Match NameE-valueIdentityDescription
SPOPL_HUMAN1.618e-2735.50Speckle-type POZ protein-like OS=Homo sapiens GN=S... [more]
SPOPL_MOUSE1.789e-2635.00Speckle-type POZ protein-like OS=Mus musculus GN=S... [more]
SPOLB_DANRE1.789e-2636.04Speckle-type POZ protein-like B OS=Danio rerio GN=... [more]
SPOLA_DANRE3.986e-2636.04Speckle-type POZ protein-like A OS=Danio rerio GN=... [more]
SPOPL_XENLA8.881e-2634.00Speckle-type POZ protein-like OS=Xenopus laevis GN... [more]
SPOP_DANRE1.160e-2536.61Speckle-type POZ protein OS=Danio rerio GN=spop PE... [more]
TDPZ2_MOUSE5.756e-2535.91TD and POZ domain-containing protein 2 OS=Mus musc... [more]
SPOP_PONAB9.819e-2536.07Speckle-type POZ protein OS=Pongo abelii GN=SPOP P... [more]
SPOP_MOUSE9.819e-2536.07Speckle-type POZ protein OS=Mus musculus GN=Spop P... [more]
SPOP_HUMAN9.819e-2536.07Speckle-type POZ protein OS=Homo sapiens GN=SPOP P... [more]

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Properties
Property NameValue
Genbank descriptionKN0AAK3CC07FM1 AbsCFruit Citrus sinensis cDNA 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>DY257628 ID=DY257628; Name=DY257628; organism=Citrus sinensis; type=EST; length=802bp
TTGGTAAGCAATTTGGGAAGCTTTTGGAAGGCGGAAGGTTTACTGATGTG
AATTTTGAAGTTGATGGAGAAAGGTTTGCTGCCCACAAGTTGGTACTTGC
TACACGTTCACCTGTGTTCAAGGCACAACTTTTTGGTCCATTAAAGGATC
AAAACACTCAATGCATTAAGGTGGAAGACATGGAAGTCCCAGTTTTTAAG
GCATTATTGCATTTTATCTACTGGGATGCTCTGCCAGATATGGAAGACCT
TGTTGATCTGAGTCCAAAATGGGCTTCTACACTGATGGCTCAGCATCTTC
TTGCTGCAGCAGACCGGTATGCACTTGAGAGGCTCAAATTACTCTGTGAG
GCTAAGCTCTGTGAAGATGTTGCTATAAACACTGTTGCCACCACGTTGGC
CTTGGCAGAGCAGCATCACTGTTCCCAACTGAAAGCTGTTTGTCTCAAAT
TCATTGCATCACCTGAAAATTTAAAAGCTGTGATGCAAACAGATGGGTTT
GAATACTTAAAAGAAAGTTGCCCTTCTGTCCTCACCGAACTGCTACAATA
TGTGGCCAAAATAGGCGAGCATTCTGTCATTGCTTCAGGGCATGGGAACG
AGACATTACCAGATGGCTGTGATGTCAATGGGAGGCGGGTGAAGCAGAGG
GTACATTGATAAAGGAATGACTGATCTTCCATTATCTTTACCACCCCGGA
AAAAAAAAGTTAGGTCCAAACATTTTTGGATTATACTAACAGTTGATAAA
TTATTTGTTAAATATAACATTAGTGGTTCATTAATATTTTCTACAATTTT
TG
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