CX043473

Overview
NameCX043473
Unique NameCX043473
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length596
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig1798 contig Csv1_Contig1798:482..1077. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
[Close]
BLAST of CX043473 vs. ExPASy Swiss-Prot
Match: GSTX6_SOYBN (Probable glutathione S-transferase OS=Glycine max GN=HSP26-A PE=2 SV=1)

HSP 1 Score: 89.3521 bits (220), Expect = 1.517e-17
Identity = 45/130 (34.62%), Postives = 73/130 (56.15%), Query Frame = 3 
Query:    3 DPYQRAMARFWAKYSEELMVKAFMALV--LXXXXXXXXXXXXXXGLEKIEGEFKGKSGLLFAEGEGNIGYLELAFGWILYWLPVWEEAGSFQILDPQKFPVINEWSTKFVNHPLIKENLPARDRMLVYFR 386
            DPYQRA+ARFW+K+ ++ +V A    V  +               L+ +E E K K    F  GE   G +++A  +I +W+P+++E    Q+   +KFP++ +WS +F+NHP + E LP RD +  YF+
Sbjct:   90 DPYQRALARFWSKFIDDKIVGAVSKSVFTVDEKEREKNVEETYEALQFLENELKDKK---FFGGE-EFGLVDIAAVFIAFWIPIFQEIAGLQLFTSEKFPILYKWSQEFLNHPFVHEVLPPRDPLFAYFK 215
[Close]
BLAST of CX043473 vs. ExPASy Swiss-Prot
Match: GSTX1_TOBAC (Probable glutathione S-transferase OS=Nicotiana tabacum PE=2 SV=1)

HSP 1 Score: 74.7146 bits (182), Expect = 3.868e-13
Identity = 39/128 (30.47%), Postives = 66/128 (51.56%), Query Frame = 3 
Query:    3 DPYQRAMARFWAKYSEELMVKAFMALVLXXXXXXXXXXXXXXGLEKIEGEFKGKSGLLFAEGEGNIGYLELAFGWILYWLPVWEEAGSFQILDPQKFPVINEWSTKFVNHPLIKENLPARDRMLVYFR 386
            DPY RA+ARFWAK+ ++ +       +                L+ ++ E K K    F  G+   G+ ++A   + +WL V+EEA    ++  +KFP   +W  +++N   IKE+LP RD +L ++R
Sbjct:   86 DPYDRALARFWAKFLDDKVPAVVKTFLRKGEEQEKDKEEVCEMLKVLDNELKDKK---FFVGD-KFGFADIAANLVAFWLGVFEEASGVVLVTSEKFPNFCKWRGEYINCSQIKESLPPRDELLAFYR 209
[Close]
BLAST of CX043473 vs. ExPASy Swiss-Prot
Match: GSTX3_TOBAC (Probable glutathione S-transferase OS=Nicotiana tabacum PE=2 SV=1)

HSP 1 Score: 70.8626 bits (172), Expect = 5.585e-12
Identity = 37/128 (28.91%), Postives = 64/128 (50.00%), Query Frame = 3 
Query:    3 DPYQRAMARFWAKYSEELMVKAFMALVLXXXXXXXXXXXXXXGLEKIEGEFKGKSGLLFAEGEGNIGYLELAFGWILYWLPVWEEAGSFQILDPQKFPVINEWSTKFVNHPLIKENLPARDRMLVYFR 386
            DPY RA+ARFW+K+  + +                        L+ ++ E K K    F  G+   G+ ++A   + +WL V+EE     ++  +KFP  + W  +++N   +KE+LP+RD +L +FR
Sbjct:   86 DPYDRALARFWSKFLGDKVAAVVNTFFRKGEEQEKGKEEVYEMLKVLDNELKDKK---FFVGD-KFGFADIAANLVGFWLGVFEEGYGVVLVTSEKFPNFSRWRDEYINCSQVKESLPSRDELLAFFR 209
[Close]
BLAST of CX043473 vs. ExPASy Swiss-Prot
Match: GSTX2_TOBAC (Probable glutathione S-transferase OS=Nicotiana tabacum PE=2 SV=1)

HSP 1 Score: 70.8626 bits (172), Expect = 5.585e-12
Identity = 37/128 (28.91%), Postives = 64/128 (50.00%), Query Frame = 3 
Query:    3 DPYQRAMARFWAKYSEELMVKAFMALVLXXXXXXXXXXXXXXGLEKIEGEFKGKSGLLFAEGEGNIGYLELAFGWILYWLPVWEEAGSFQILDPQKFPVINEWSTKFVNHPLIKENLPARDRMLVYFR 386
            DPY RA+ARFWAK+ ++ +                        L+ ++ E K K    F  G+   G+ ++A   + +WL V+EE     ++  +KFP  ++W  +++N   + E+LP RD +L +FR
Sbjct:   86 DPYDRALARFWAKFLDDKVAAVVNTFFRKGEEQEKGKEEVYEMLKVLDNELKDKK---FFAGD-KFGFADIAANLVGFWLGVFEEGYGDVLVKSEKFPNFSKWRDEYINCSQVNESLPPRDELLAFFR 209
The following BLAST results are available for this feature:
BLAST of CX043473 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 4
Match NameE-valueIdentityDescription
GSTX6_SOYBN1.517e-1734.62Probable glutathione S-transferase OS=Glycine max ... [more]
GSTX1_TOBAC3.868e-1330.47Probable glutathione S-transferase OS=Nicotiana ta... [more]
GSTX3_TOBAC5.585e-1228.91Probable glutathione S-transferase OS=Nicotiana ta... [more]
GSTX2_TOBAC5.585e-1228.91Probable glutathione S-transferase OS=Nicotiana ta... [more]
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Properties
Property NameValue
Genbank descriptionUCRCS07_11C07_g Parent Washington Navel Orange Thrip-Challenged Flavedo cDNA Library UCRCS07 Citrus sinensis cDNA clone UCRCS07-11C07-E13-1-7.g, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX043473 ID=CX043473; Name=CX043473; organism=Citrus sinensis; type=EST; length=596bp
GAGACCCTTACCAAAGAGCCATGGCTCGTTTCTGGGCTAAATATTCAGAA
GAACTGATGGTGAAAGCATTCATGGCTCTGGTTTTGAAAGGAGAGGCAAA
GGAGAAAAATGCGAAAGAATTTGCAGAAGGATTGGAGAAGATAGAAGGGG
AATTCAAGGGAAAGAGCGGCTTGTTGTTTGCTGAAGGAGAGGGCAATATT
GGGTATTTGGAACTTGCATTTGGTTGGATTCTTTACTGGCTGCCTGTTTG
GGAAGAAGCTGGATCCTTTCAAATTCTTGACCCTCAGAAATTTCCAGTCA
TCAATGAATGGAGCACCAAGTTTGTGAATCACCCTCTCATCAAAGAAAAC
TTGCCGGCCAGGGACCGGATGCTCGTCTATTTCCGCAAACTCAGTGAAGA
GTTCTTTACCTTATTCCGGGCATAGAGCATCCAAGAATTATGGATCAAAT
AATATTTGTGCTAATAAAGGTGGTGTTGTGGTGTGTTGTAATGACTTGTA
TTTTATTTTCCTCTTTCTTTGCATCTTTATTTCAATTTTGTAATAAAATT
ACTCTTTAATTAGTTAAAATTATCTCACTCTTCTTCATTCAAAAAA
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