EY665191

Overview
NameEY665191
Unique NameEY665191
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length889
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
EY665191_ssr195 microsatellite EY665191_ssr195:195..209. BLAST: Citrus ESTs to Prunus persica proteins V1
Homology
[Close]
BLAST of EY665191 vs. ExPASy Swiss-Prot
Match: SAP5_ARATH (Zinc finger A20 and AN1 domain-containing stress-associated protein 5 OS=Arabidopsis thaliana GN=SAP5 PE=1 SV=1)

HSP 1 Score: 103.605 bits (257), Expect = 1.567e-21
Identity = 78/187 (41.71%), Postives = 92/187 (49.20%), Query Frame = 3 
Query:   24 MAQKTEKEETEFKVPETLT-----LCVNNCGFTGNPATNNMCQKCFNXXXXXXXXXXXXXXXXXXXXXXXXXXIIKFSSEK-SLRSRP---IIRSGSSDAAGTTGQNQELTDRREKEANVEKQVVNRCSGCRQKVGLTGLNVAAGTVL-RQHRYSNVTIEAIIKNRRARTPSQRKSG-DKAAKIVKV 551
            MAQ+TEKEETEFKV ETLT     LC NNCG T NPATNNMCQKCFN                          I+K S+   +LRS P   +IR    DA     Q                Q+VNRCSGCR+KVGLTG     G +   +HRYS+    +       R    R++   KAAK+VKV
Sbjct:    1 MAQRTEKEETEFKVLETLTTTTTTLCTNNCGVTANPATNNMCQKCFN-----------ASLVSAAAGVVESGSILKRSARSVNLRSSPAKVVIRPREIDAVKKRDQ----------------QIVNRCSGCRKKVGLTGFRCRCGELFCSEHRYSDRHDCSYDYKTAGREAIARENPVVKAAKMVKV 160
[Close]
BLAST of EY665191 vs. ExPASy Swiss-Prot
Match: SAP6_ORYSJ (Zinc finger A20 and AN1 domain-containing stress-associated protein 6 OS=Oryza sativa subsp. japonica GN=SAP6 PE=2 SV=1)

HSP 1 Score: 73.9442 bits (180), Expect = 1.329e-12
Identity = 45/144 (31.25%), Postives = 62/144 (43.06%), Query Frame = 3 
Query:   33 KTEKEETEFKVPETLTLCVNNCGFTGNPATNNMCQKCFNXXXXXXXXXXXXXXXXXXXXXXXXXXIIKFSSEKSLRSRPIIRSGSSDAAGTTGQNQELTDRREKEANVEKQVVNRCSGCRQKVGLTGLNV-AAGTVLRQHRYSN 461
            K E EET    PE   LCVNNCGF G+  T NMC KC+                           +++     SL S P++   +   +G+    +++      E +  K   NRC  CR+KVGLTG      GT    HRY++
Sbjct:    7 KKEAEETGVHTPEAPILCVNNCGFFGSRMTENMCSKCYR----------------DTVKAKTVATVVEKKPLASLSSTPLVTEVTDGGSGSVADGKQV-----MEEDTPKPPSNRCLSCRKKVGLTGFKCRCGGTFCSMHRYAD 129
The following BLAST results are available for this feature:
BLAST of EY665191 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 2
Match NameE-valueIdentityDescription
SAP5_ARATH1.567e-2141.71Zinc finger A20 and AN1 domain-containing stress-a... [more]
SAP6_ORYSJ1.329e-1231.25Zinc finger A20 and AN1 domain-containing stress-a... [more]
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Properties
Property NameValue
Genbank descriptionCS00-C1-101-083-A11-CT.F Sweet orange leaf, infected with Xylella fastidiosa (stage 1 of 2) Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY665191 ID=EY665191; Name=EY665191; organism=Citrus sinensis; type=EST; length=889bp
AAAAAAAAGAGTTTTTCTCAGAAATGGCTCAGAAAACAGAAAAAGAAGAG
ACAGAGTTCAAGGTTCCTGAAACTTTGACTCTTTGCGTAAACAACTGTGG
CTTCACCGGAAATCCAGCCACAAATAATATGTGCCAGAAATGTTTCAACG
CAACCGCTACCACCACCGCAAGCGCCGTTGCTGGTTCGAGTACGGGCGGC
GGCGGCGGCGGAGGAAGCGGTGTAGCGATCATAAAGTTTTCTAGCGAGAA
ATCTTTGAGATCTCGGCCTATCATCCGGTCTGGGTCATCCGATGCTGCCG
GTACGACCGGTCAAAATCAAGAATTGACGGATCGGCGAGAGAAGGAAGCC
AACGTAGAAAAACAAGTTGTGAATCGGTGCTCCGGTTGTCGACAAAAGGT
GGGATTGACCGGATTAAATGTCGCTGCGGGAACTGTTCTGCGGCAACATC
GATACTCCAACGTCACAATTGAAGCTATAATTAAAAACCGCCGGGCGCGA
ACGCCATCGCAGCGAAAATCCGGGGACAAAGCTGCCAAAATCGTAAAAGT
TTGAAATGTTAATTTGAAACCCTAATGAAAGGTCAAATTTATAACAATTT
TATCCCATCATGAAACAATTCCACTTCCCCCAATCTTTCCCCAGAAATTT
GGTAACTAAGGTCTCAAAAAAGGGATTTAAAAAAAAGTTAAATACAATTA
CAAACTTTCCCCTTTTCAAAAATTTAACAATCTCATCTATCACCGAATAT
TATTCTCCAAAGAGAAAAAAAAAAAGGGGGATTTCAGAAAAAGCGCTTCC
TGTCAAAAAAAAAAAAATAAGGGGCGCCTATCGTTAGAACCAAACAATTA
ACTCTTCTATTGTGATTAAAACCATTTCCTTGTATTACA
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