EY720646

Overview
NameEY720646
Unique NameEY720646
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length809
Libraries
Library NameType
Sweet orange fruit, development stadium (4 of 6)cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of EY720646 vs. ExPASy Swiss-Prot
Match: DC4C_ACIAD (4-carboxymuconolactone decarboxylase OS=Acinetobacter sp. (strain ADP1) GN=pcaC PE=4 SV=2)

HSP 1 Score: 122.094 bits (305), Expect = 3.677e-27
Identity = 49/93 (52.69%), Postives = 76/93 (81.72%), Query Frame = 3
Query:   27 HSEFQEMITRHAWGDIWTRPGLPRHTRSLITIAMLIGMNRTEELKLHLRAAASNGVTRAEIKEVLMQSAIYCGIPAANATFHLAESVWDELGV 305
            + +FQ  I+R AWG++W+RPGLPRHTRSL+TIA+L+ + R +EL++HLRA  +NGVT+ E+KE+++  ++Y G+PA+NA  H+AE V+ +LG+
Sbjct:   34 NQDFQNFISRFAWGEVWSRPGLPRHTRSLVTIAVLLALGREDELRMHLRACFNNGVTKDELKELILHCSLYAGLPASNAAMHMAEEVFKDLGI 126          
The following BLAST results are available for this feature:
BLAST of EY720646 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 1
Match NameE-valueIdentityDescription
DC4C_ACIAD3.677e-2752.694-carboxymuconolactone decarboxylase OS=Acinetobac... [more]
back to top
Properties
Property NameValue
Genbank descriptionCS00-C3-703-012-D10-CT.F Sweet orange fruit, development stadium (4 of 6) Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY720646 ID=EY720646; Name=EY720646; organism=Citrus sinensis; type=EST; length=809bp
CGCAGCCTCAACGCCCTGACCGAATTCACAGCGAGTTCCAGGAAATGATC
ACCCGCCACGCCTGGGGTGATATCTGGACCCGCCCGGGCCTGCCGCGGCA
TACCCGCAGCCTGATCACCATCGCCATGCTGATCGGCATGAACCGCACCG
AAGAGCTGAAGCTGCACCTGCGGGCCGCCGCGAGCAACGGCGTGACCCGC
GCCGAGATCAAGGAAGTGCTGATGCAGAGCGCAATCTACTGCGGGATCCC
GGCGGCGAATGCGACGTTTCATTTGGCTGAGTCGGTGTGGGATGAGTTGG
GGGTTGAATCGCGCGATCCAGTCTGATTGAACCCCCGCAGGACGCGTCTG
CTATGTGTACTGGGTGCGTAACGGGCGGCCCATTTCCTCTCGGAGAGCAT
TTTCCGTAAAGGGCTTGGGATTGGTTGTCGTGGGTTCGGTTGATCGATGA
TTGTCGAAGTCAAAAGGCAGCGCAATCGTAGGCAGGCCTACAGCTTGCCG
TTCGGCGTGGGGTTCGCCGGACGGGTTTCTCCGGGATGCCGGTATCGCCT
GCGAGAAAGGTGCGCGTGACGCCGTGGTAGGCGTGGGCCGGTCCTGGGTC
AAGGGGGGTGAGTCGGGGCGGCGCCTGAGGCACAGGAGTAAGGAAGGGGT
GTTATGGTCTTGCAGAGGGTGTGGGGGGCTTGTTCGAGTTTTGCGGTGAG
GGTAACGCGGAGTGCGAGGTGTTGTCGGCCCAGGGCCCGCCCGGGCGTTC
CTCCTTGCGCCCCCCTACGAAACTGATGATCCCACCCACACCCCACACCG
GGGCGACAC
back to top