EY665145

Overview
NameEY665145
Unique NameEY665145
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length851
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
[Close]
BLAST of EY665145 vs. ExPASy Swiss-Prot
Match: ERA_AMOA5 (GTP-binding protein era homolog OS=Amoebophilus asiaticus (strain 5a2) GN=era PE=3 SV=1)

HSP 1 Score: 87.0409 bits (214), Expect = 1.416e-16
Identity = 43/92 (46.74%), Postives = 64/92 (69.57%), Query Frame = 2 
Query:  383 HKSGYVAVLWKPNVGKSSLANQMIGQQLSIVTNKPQTTGHRILGICSGPDYQMILYDTPGIIEKKIHMLDSMMMKNVRSAGINADCIAALVD 658
            H++G+V ++ KPNVGKS+L N+++G++LSI+T K QTT H I GI S  D+Q+I  DTPGI+ K  + L   MM  ++ A ++ D +  LVD
Sbjct:    6 HQAGFVTIIGKPNVGKSTLMNRLVGERLSIITPKAQTTRHSICGIVSDTDFQIIFTDTPGIL-KPAYELQESMMHMLQHALVDTDVLLWLVD 96
[Close]
BLAST of EY665145 vs. ExPASy Swiss-Prot
Match: ERA_XANOR (GTP-binding protein era homolog OS=Xanthomonas oryzae pv. oryzae GN=era PE=3 SV=1)

HSP 1 Score: 86.6557 bits (213), Expect = 1.849e-16
Identity = 39/93 (41.94%), Postives = 65/93 (69.89%), Query Frame = 2 
Query:  383 HKSGYVAVLWKPNVGKSSLANQMIGQQLSIVTNKPQTTGHRILGICSGPDYQMILYDTPGIIEKKIHMLDSMMMKNVRSAGINADCIAALVDA 661
            H+SG VAV+ +PNVGKS+L N ++G ++SIV+N+PQTT HR+LGI + P+ Q++L DTPG+  ++   ++ +M +  R +    D    +++A
Sbjct:    8 HRSGSVAVIGRPNVGKSTLTNALVGAKVSIVSNRPQTTRHRLLGIATFPEGQLVLVDTPGLHREQKRAMNRVMNRAARGSLEGVDAAVLVIEA 100
[Close]
BLAST of EY665145 vs. ExPASy Swiss-Prot
Match: ERA_XANOM (GTP-binding protein era homolog OS=Xanthomonas oryzae pv. oryzae (strain MAFF 311018) GN=era PE=3 SV=1)

HSP 1 Score: 86.6557 bits (213), Expect = 1.849e-16
Identity = 39/93 (41.94%), Postives = 65/93 (69.89%), Query Frame = 2 
Query:  383 HKSGYVAVLWKPNVGKSSLANQMIGQQLSIVTNKPQTTGHRILGICSGPDYQMILYDTPGIIEKKIHMLDSMMMKNVRSAGINADCIAALVDA 661
            H+SG VAV+ +PNVGKS+L N ++G ++SIV+N+PQTT HR+LGI + P+ Q++L DTPG+  ++   ++ +M +  R +    D    +++A
Sbjct:    8 HRSGSVAVIGRPNVGKSTLTNALVGAKVSIVSNRPQTTRHRLLGIATFPEGQLVLVDTPGLHREQKRAMNRVMNRAARGSLEGVDAAVLVIEA 100
[Close]
BLAST of EY665145 vs. ExPASy Swiss-Prot
Match: ERA_XANC5 (GTP-binding protein era homolog OS=Xanthomonas campestris pv. vesicatoria (strain 85-10) GN=era PE=3 SV=1)

HSP 1 Score: 86.6557 bits (213), Expect = 1.849e-16
Identity = 39/93 (41.94%), Postives = 65/93 (69.89%), Query Frame = 2 
Query:  383 HKSGYVAVLWKPNVGKSSLANQMIGQQLSIVTNKPQTTGHRILGICSGPDYQMILYDTPGIIEKKIHMLDSMMMKNVRSAGINADCIAALVDA 661
            H+SG VAV+ +PNVGKS+L N ++G ++SIV+N+PQTT HR+LGI + P+ Q++L DTPG+  ++   ++ +M +  R +    D    +++A
Sbjct:    8 HRSGSVAVIGRPNVGKSTLTNALVGAKVSIVSNRPQTTRHRLLGIATFPEGQLVLVDTPGLHREQKRAMNRVMNRAARGSLEGVDAAVLVIEA 100
[Close]
BLAST of EY665145 vs. ExPASy Swiss-Prot
Match: ERA_XANAC (GTP-binding protein era homolog OS=Xanthomonas axonopodis pv. citri GN=era PE=3 SV=1)

HSP 1 Score: 86.6557 bits (213), Expect = 1.849e-16
Identity = 39/93 (41.94%), Postives = 65/93 (69.89%), Query Frame = 2 
Query:  383 HKSGYVAVLWKPNVGKSSLANQMIGQQLSIVTNKPQTTGHRILGICSGPDYQMILYDTPGIIEKKIHMLDSMMMKNVRSAGINADCIAALVDA 661
            H+SG VAV+ +PNVGKS+L N ++G ++SIV+N+PQTT HR+LGI + P+ Q++L DTPG+  ++   ++ +M +  R +    D    +++A
Sbjct:    8 HRSGSVAVIGRPNVGKSTLTNALVGAKVSIVSNRPQTTRHRLLGIATFPEGQLVLVDTPGLHREQKRAMNRVMNRAARGSLEGVDAAVLVIEA 100
[Close]
BLAST of EY665145 vs. ExPASy Swiss-Prot
Match: ERA_XANCP (GTP-binding protein era homolog OS=Xanthomonas campestris pv. campestris GN=era PE=3 SV=1)

HSP 1 Score: 85.8853 bits (211), Expect = 3.154e-16
Identity = 39/93 (41.94%), Postives = 65/93 (69.89%), Query Frame = 2 
Query:  383 HKSGYVAVLWKPNVGKSSLANQMIGQQLSIVTNKPQTTGHRILGICSGPDYQMILYDTPGIIEKKIHMLDSMMMKNVRSAGINADCIAALVDA 661
            H+SG VAV+ +PNVGKS+L N ++G ++SIV+N+PQTT HR+LGI + P+ Q++L DTPG+  ++   ++ +M +  R +    D    +++A
Sbjct:    7 HRSGSVAVIGRPNVGKSTLTNALVGAKVSIVSNRPQTTRHRLLGIATFPEGQLMLVDTPGLHREQKRAMNRVMNRAARGSLEGVDAAVLVIEA 99
[Close]
BLAST of EY665145 vs. ExPASy Swiss-Prot
Match: ERA_XANCB (GTP-binding protein era homolog OS=Xanthomonas campestris pv. campestris (strain B100) GN=era PE=3 SV=1)

HSP 1 Score: 85.8853 bits (211), Expect = 3.154e-16
Identity = 39/93 (41.94%), Postives = 65/93 (69.89%), Query Frame = 2 
Query:  383 HKSGYVAVLWKPNVGKSSLANQMIGQQLSIVTNKPQTTGHRILGICSGPDYQMILYDTPGIIEKKIHMLDSMMMKNVRSAGINADCIAALVDA 661
            H+SG VAV+ +PNVGKS+L N ++G ++SIV+N+PQTT HR+LGI + P+ Q++L DTPG+  ++   ++ +M +  R +    D    +++A
Sbjct:    7 HRSGSVAVIGRPNVGKSTLTNALVGAKVSIVSNRPQTTRHRLLGIATFPEGQLMLVDTPGLHREQKRAMNRVMNRAARGSLEGVDAAVLVIEA 99
[Close]
BLAST of EY665145 vs. ExPASy Swiss-Prot
Match: ERA_XANC8 (GTP-binding protein era homolog OS=Xanthomonas campestris pv. campestris (strain 8004) GN=era PE=3 SV=1)

HSP 1 Score: 85.8853 bits (211), Expect = 3.154e-16
Identity = 39/93 (41.94%), Postives = 65/93 (69.89%), Query Frame = 2 
Query:  383 HKSGYVAVLWKPNVGKSSLANQMIGQQLSIVTNKPQTTGHRILGICSGPDYQMILYDTPGIIEKKIHMLDSMMMKNVRSAGINADCIAALVDA 661
            H+SG VAV+ +PNVGKS+L N ++G ++SIV+N+PQTT HR+LGI + P+ Q++L DTPG+  ++   ++ +M +  R +    D    +++A
Sbjct:    7 HRSGSVAVIGRPNVGKSTLTNALVGAKVSIVSNRPQTTRHRLLGIATFPEGQLMLVDTPGLHREQKRAMNRVMNRAARGSLEGVDAAVLVIEA 99
[Close]
BLAST of EY665145 vs. ExPASy Swiss-Prot
Match: ERA_MARAV (GTP-binding protein era homolog OS=Marinobacter aquaeolei (strain ATCC 700491 / DSM 11845 / VT8) GN=era PE=3 SV=1)

HSP 1 Score: 84.3445 bits (207), Expect = 9.175e-16
Identity = 44/99 (44.44%), Postives = 64/99 (64.65%), Query Frame = 2 
Query:  374 HPNHKSGYVAVLWKPNVGKSSLANQMIGQQLSIVTNKPQTTGHRILGICSGPDYQMILYDTPGIIEKKIHMLDSMMMKNVRSAGINADCIAALVD--AW 664
            +P  + G+VA++ +PNVGKS+L N ++GQ+LSI + KPQTT H++LGI +    Q I  DTPG+ E +   L+  M K   SA I+ D +  +VD  AW
Sbjct:    9 NPESRCGFVAIVGRPNVGKSTLLNHILGQKLSITSRKPQTTRHQVLGIKTEGPVQAIYVDTPGMHEDEPRALNRYMNKAAASALIDVDVVVFVVDQLAW 107
[Close]
BLAST of EY665145 vs. ExPASy Swiss-Prot
Match: ERA_XYLFT (GTP-binding protein era homolog OS=Xylella fastidiosa (strain Temecula1 / ATCC 700964) GN=era PE=3 SV=1)

HSP 1 Score: 83.9593 bits (206), Expect = 1.198e-15
Identity = 41/91 (45.05%), Postives = 65/91 (71.43%), Query Frame = 2 
Query:  383 HKSGYVAVLWKPNVGKSSLANQMIGQQLSIVTNKPQTTGHRILGICSGPDYQMILYDTPGIIEKKIHMLDSMMMKNVRSAGINADCIAALV 655
            ++ G +AV+ +PNVGKS+L N ++G ++SIV+N+PQTT HR+LGI + P+ Q+IL DTPG+  ++ H ++ +M +  R  G   D  AAL+
Sbjct:    7 YRCGRIAVIGRPNVGKSTLTNALVGTKISIVSNRPQTTRHRLLGIATFPEGQIILVDTPGLHREQKHPMNRLMNRTAR--GSLEDVDAALL 95
The following BLAST results are available for this feature:
BLAST of EY665145 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 264
Match NameE-valueIdentityDescription
ERA_AMOA51.416e-1646.74GTP-binding protein era homolog OS=Amoebophilus as... [more]
ERA_XANOR1.849e-1641.94GTP-binding protein era homolog OS=Xanthomonas ory... [more]
ERA_XANOM1.849e-1641.94GTP-binding protein era homolog OS=Xanthomonas ory... [more]
ERA_XANC51.849e-1641.94GTP-binding protein era homolog OS=Xanthomonas cam... [more]
ERA_XANAC1.849e-1641.94GTP-binding protein era homolog OS=Xanthomonas axo... [more]
ERA_XANCP3.154e-1641.94GTP-binding protein era homolog OS=Xanthomonas cam... [more]
ERA_XANCB3.154e-1641.94GTP-binding protein era homolog OS=Xanthomonas cam... [more]
ERA_XANC83.154e-1641.94GTP-binding protein era homolog OS=Xanthomonas cam... [more]
ERA_MARAV9.175e-1644.44GTP-binding protein era homolog OS=Marinobacter aq... [more]
ERA_XYLFT1.198e-1545.05GTP-binding protein era homolog OS=Xylella fastidi... [more]

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Properties
Property NameValue
Genbank descriptionCS00-C1-101-074-E11-CT.F Sweet orange leaf, infected with Xylella fastidiosa (stage 1 of 2) Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY665145 ID=EY665145; Name=EY665145; organism=Citrus sinensis; type=EST; length=851bp
CTCGGNAGCAGGCGAATGAAATCAACATGAAAGCAAAGCTCCGATAATGG
AGCTAGGTGTACACATATCCTCTTCTTTTGGCAGTCTGTTCCCTCATTAC
AGCACATTAACAGCATATAGAGAAATTAAATTTGGGTTCCAAGGCAGAAG
TACTACTATCACTTGTAAAAGCAATGAACACCAAAGCCTTGTATTGTCAG
AGAAAGAAGTACAGCTACAAAAGCTTTGGAGTAACCAACGGGAAATGGAC
TTAAACGATGGTGATGAAATGGAATTTGACGATGCATCGTCGTTTCTATC
TCTGTCTGAAAAACCAGACAGGAATATGGCTTCGCCGGACGACTACGAGA
TTGAATAATTTGACTACGCCTCTCATCCAAATCACAAAAGCGGATATGTG
GCAGTACTATGGAAGCCAAATGTGGGGAAAAGTTCTCTCGCAAACCAAAT
GATCGGTCAACAGCTCTCAATTGTTACAAATAAGCCCCAAACTACGGGGC
ACCGTATTCTTGGTATCTGCTCTGGTCCAGATTATCAGATGATACTTTAT
GATACCCCTGGCATAATTGAGAAGAAAATTCACATGTTGGACTCTATGAT
GATGAAGAATGTCCGCAGTGCTGGGATTAACGCTGACTGTATTGCTGCTC
TCGTTGATGCTTGGTAAGCTCCTGAAAGAATTGATGACATTTCGCACTAC
GGAGTGGGAGACCACAAGATAAATTGCCTATATTGTCCGTACTGAATAAC
ATGATCTGATCAGCCGTGGTGAAATCGCTAAAAGCTTGAGTGCATGAGAA
ATTACAGATGTGATGAGGTATACCCGTGACGCAAATATGCCATGGAGTGG
A
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