CX043451

Overview
NameCX043451
Unique NameCX043451
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length597
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig1212 contig Csv1_Contig1212:197..792. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of CX043451 vs. ExPASy Swiss-Prot
Match: 21KD_DAUCA (21 kDa protein OS=Daucus carota PE=2 SV=1)

HSP 1 Score: 197.978 bits (502), Expect = 3.029e-50
Identity = 95/153 (62.09%), Postives = 122/153 (79.74%), Query Frame = -3
Query:  137 PALCVQSLSAYAPSIQQSPRQLAVTALSVSLSRAQSAKSFVTKLRKFRNLKHREYEAIADCLDEMGDTVDRLSKSVQELNHMGQAKGQDFLWHMSNVETWVSAALTDENTCTDGFGGKALEGKVKSSVRAQVVNVAHVTSNALSLINKFAGKH 595
            PA+C QSLSAYA +IQ +P++LA TAL VSL+R Q A++F+ +L KF+ LK R+Y AI DCL+E+ D++DR+S+S  E+ ++  AKG DF + MSNVETWVSAALTDE TC DGF GK ++GK+K SVRAQVV VA VTSNAL+L+N FA KH
Sbjct:   39 PAVCEQSLSAYAKTIQNNPQELASTALQVSLTRTQQAQTFMKRLNKFKGLKARQYAAIHDCLEEVEDSLDRVSRSCDEMKNLSHAKGNDFTFRMSNVETWVSAALTDETTCMDGFAGKGMDGKIKESVRAQVVAVARVTSNALALVNNFAAKH 191          
BLAST of CX043451 vs. ExPASy Swiss-Prot
Match: PME3_CITSI (Pectinesterase 3 OS=Citrus sinensis PE=1 SV=1)

HSP 1 Score: 72.4034 bits (176), Expect = 1.920e-12
Identity = 44/148 (29.73%), Postives = 80/148 (54.05%), Query Frame = -3
Query:  158 PALCVQSLSAYAPSIQQSPRQLAVTALSVSLSRAQSAKSF--VTKLRKFRNLKHREYEAIADCLDEMGDTVDRLSKSVQELNHMGQAKGQDFLWHMSNVETWVSAALTDENTCTDGFGGKALEGKVKSSVRAQVVNVAHVTSNALSLI 595
            P LC  +++A   + ++   Q  V  +S++++      ++  + KL K  NL  RE  A+ DCL+ + +T+D L K+V++L      K      H  +++T +SAA+T++ TC DGF        V+ ++    V+V  + SNAL++I
Sbjct:   79 PDLCFSAIAAVPEASKKVTSQKDVIEMSLNITTTAVEHNYFGIQKLLKRTNLTKREKVALHDCLETIDETLDELHKAVEDLEEYPNKKSLS--QHADDLKTLMSAAMTNQGTCLDGFSHDDANKHVRDALSDGQVHVEKMCSNALAMI 224          
BLAST of CX043451 vs. ExPASy Swiss-Prot
Match: PME1_CITSI (Pectinesterase 1 OS=Citrus sinensis GN=PECS-1.1 PE=2 SV=1)

HSP 1 Score: 72.4034 bits (176), Expect = 1.920e-12
Identity = 44/148 (29.73%), Postives = 80/148 (54.05%), Query Frame = -3
Query:  158 PALCVQSLSAYAPSIQQSPRQLAVTALSVSLSRAQSAKSF--VTKLRKFRNLKHREYEAIADCLDEMGDTVDRLSKSVQELNHMGQAKGQDFLWHMSNVETWVSAALTDENTCTDGFGGKALEGKVKSSVRAQVVNVAHVTSNALSLI 595
            P LC  +++A   + ++   Q  V  +S++++      ++  + KL K  NL  RE  A+ DCL+ + +T+D L K+V++L      K      H  +++T +SAA+T++ TC DGF        V+ ++    V+V  + SNAL++I
Sbjct:   79 PDLCFSAIAAVPEASKKVTSQKDVIEMSLNITTTAVEHNYFGIQKLLKRTNLTKREKVALHDCLETIDETLDELHKAVEDLEEYPNKKSLS--QHADDLKTLMSAAMTNQGTCLDGFSHDDANKHVRDALSDGQVHVEKMCSNALAMI 224          
BLAST of CX043451 vs. ExPASy Swiss-Prot
Match: PME2_ARATH (Pectinesterase 2 OS=Arabidopsis thaliana GN=PME2 PE=2 SV=2)

HSP 1 Score: 71.2478 bits (173), Expect = 4.276e-12
Identity = 43/147 (29.25%), Postives = 81/147 (55.10%), Query Frame = -3
Query:  158 PALCVQSLSAYAPSIQQSPRQLAVTALSVSLSRAQSAKSFVTKL-RKFRNLKHREYEAIADCLDEMGDTVDRLSKSVQELNHMGQAKGQDFLWHMSNVETWVSAALTDENTCTDGFGGKALEGKVKSSVRAQVVNVAHVTSNALSLI 595
            P LC  +++A       S +++   +L+++    +     V KL  K + L  RE  A+ DCL+ + +T+D L  +V++L+   + K      H  +++T +S+A+T++ TC DGF     + KV+ ++    V+V H+ SNAL++I
Sbjct:   72 PELCFSAVAATGGKELTSQKEVIEASLNLTTKAVKHNYFAVKKLIAKRKGLTPREVTALHDCLETIDETLDELHVAVEDLHQYPKQKS--LRKHADDLKTLISSAITNQGTCLDGFSYDDADRKVRKALLKGQVHVEHMCSNALAMI 216          
BLAST of CX043451 vs. ExPASy Swiss-Prot
Match: PME3_PHAVU (Pectinesterase 3 OS=Phaseolus vulgaris GN=MPE3 PE=2 SV=1)

HSP 1 Score: 68.9366 bits (167), Expect = 2.122e-11
Identity = 49/154 (31.82%), Postives = 73/154 (47.40%), Query Frame = -3
Query:  143 PALCVQSLSAYAPSIQQSPRQLAVTALSVSLSRAQSAKSFVTKLRKFRNLKHREYEAIADCLDEMGDTVDRLSKSVQELNHMGQAKGQDFLWHMSNVETWVSAALTDENTCTDGFG---GKALEGKVKSSVRAQVVNVAHVTSNALSLINKFAG 595
            P+ C  S+S+   S    P  L   +L V++    S   F +KLR       R  +AI  C    GD +DRL+ S+  L  +           +SNVETW+SAALTD++TC D  G     A  G ++  +   + N     SN+L+++ K  G
Sbjct:   87 PSSCFSSISSLPESNTTDPELLFKLSLRVAIDELSS---FPSKLRANAEQDARLQKAIDVCSSVFGDALDRLNDSISALGTVAGRIASSA--SVSNVETWLSAALTDQDTCLDAVGELNSTAARGALQ-EIETAMRNSTEFASNSLAIVTKILG 234          
BLAST of CX043451 vs. ExPASy Swiss-Prot
Match: PME3_ARATH (Pectinesterase/pectinesterase inhibitor 3 OS=Arabidopsis thaliana GN=PME3 PE=2 SV=2)

HSP 1 Score: 68.5514 bits (166), Expect = 2.772e-11
Identity = 40/147 (27.21%), Postives = 84/147 (57.14%), Query Frame = -3
Query:  158 PALCVQSLSAYAPSIQQSPRQLAVTALSVSLSRAQSAKSFVTKL-RKFRNLKHREYEAIADCLDEMGDTVDRLSKSVQELNHMGQAKGQDFLWHMSNVETWVSAALTDENTCTDGFGGKALEGKVKSSVRAQVVNVAHVTSNALSLI 595
            P LC+ ++         S + +   +++++++  +     V KL +K + L  RE  A+ DCL+ + +T+D L ++V++L H+   K +    H  +++T +S+A+T++ TC DGF     + +V+ ++    ++V H+ SNAL++I
Sbjct:   69 PELCISAVVTAGGVELTSQKDVIEASVNLTITAVEHNYFTVKKLIKKRKGLTPREKTALHDCLETIDETLDELHETVEDL-HLYPTK-KTLREHAGDLKTLISSAITNQETCLDGFSHDDADKQVRKALLKGQIHVEHMCSNALAMI 213          
The following BLAST results are available for this feature:
BLAST of CX043451 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 6
Match NameE-valueIdentityDescription
21KD_DAUCA3.029e-5062.0921 kDa protein OS=Daucus carota PE=2 SV=1[more]
PME3_CITSI1.920e-1229.73Pectinesterase 3 OS=Citrus sinensis PE=1 SV=1[more]
PME1_CITSI1.920e-1229.73Pectinesterase 1 OS=Citrus sinensis GN=PECS-1.1 PE... [more]
PME2_ARATH4.276e-1229.25Pectinesterase 2 OS=Arabidopsis thaliana GN=PME2 P... [more]
PME3_PHAVU2.122e-1131.82Pectinesterase 3 OS=Phaseolus vulgaris GN=MPE3 PE=... [more]
PME3_ARATH2.772e-1127.21Pectinesterase/pectinesterase inhibitor 3 OS=Arabi... [more]
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Properties
Property NameValue
Genbank descriptionUCRCS07_11B06_g Parent Washington Navel Orange Thrip-Challenged Flavedo cDNA Library UCRCS07 Citrus sinensis cDNA clone UCRCS07-11B06-C11-1-7.g, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX043451 ID=CX043451; Name=CX043451; organism=Citrus sinensis; type=EST; length=597bp
ATTTTTATAGATATGCTCAAAATTAACACTCACTTATAACTGATGATTAA
TTTGTACATTAAAACTAAACCAAAGATAAAAAGAGACACAAACTCTCGCA
AAACATTCACACAGCCATATGGTTAACTACGGCTCAGTGTTTCCCAGCAA
ACTTATTGATCAGTGAAAGGGCATTGCTAGTGACATGAGCAACATTAACA
ACCTGAGCCCTAACAGAGGACTTAACCTTACCCTCCAAGGCCTTGCCACC
GAACCCATCAGTACAAGTGTTCTCATCAGTCAAAGCAGCACTAACCCATG
TCTCAACGTTGCTCATGTGCCACAGAAAGTCCTGACCCTTGGCCTGACCC
ATGTGGTTCAGCTCCTGAACCGACTTGCTGAGCCGGTCCACAGTGTCACC
CATCTCATCCAAGCAGTCGGCAATCGCCTCATACTCTCTGTGCTTCAGGT
TCCTGAACTTCCTCAGCTTGGTCACGAATGACTTTGCGGATTGGGCCCTG
GAGAGGCTCACGGACAAGGCTGTGACAGCCAGTTGCCGGGGGCTTTGTTG
AATTGATGGGGCATAAGCTGAGAGAGACTGCACGCACAGCGCTGGAT
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