CX300924
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CX300924 vs. ExPASy Swiss-Prot
Match: DOF46_ARATH (Dof zinc finger protein DOF4.6 OS=Arabidopsis thaliana GN=DOF4.6 PE=2 SV=2) HSP 1 Score: 130.183 bits (326), Expect = 3.258e-30 Identity = 69/121 (57.02%), Postives = 75/121 (61.98%), Query Frame = 3 Query: 3 ARPQKEQALNCPRCNSTNTKFCYYNNYSLTQPRYFCKTCRRYWTEGGSLRNIPVGGGXXXXXXXXXXXXXLPD-------PATP---PSHHPH-----------QNPK-IHDHGQDLNLAF 299 ARP+K+QA+NCPRCNSTNTKFCYYNNYSLTQPRYFCK CRRYWTEGGSLRNIPVGGG + + PAT HH H QNPK + QDLNL F Sbjct: 45 ARPEKDQAVNCPRCNSTNTKFCYYNNYSLTQPRYFCKGCRRYWTEGGSLRNIPVGGGSRKNKRSHSSSSDISNNHSDSTQPATKKHLSDHHHHLMSMSQQGLTGQNPKFLETTQQDLNLGF 165
BLAST of CX300924 vs. ExPASy Swiss-Prot
Match: DOF18_ARATH (Dof zinc finger protein DOF1.8 OS=Arabidopsis thaliana GN=DOF1.8 PE=2 SV=1) HSP 1 Score: 124.02 bits (310), Expect = 2.335e-28 Identity = 71/151 (47.02%), Postives = 79/151 (52.32%), Query Frame = 3 Query: 3 ARPQKEQALNCPRCNSTNTKFCYYNNYSLTQPRYFCKTCRRYWTEGGSLRNIPVGGG-------------XXXXXXXXXXXXXLPDPATPPSHHPHQNPKIHDHG-------------------QDLNLAFPAATTQGYR---SISELVQL 350 ARP+K+QALNCPRCNS NTKFCYYNNYSLTQPRYFCK CRRYWT GGSLRNIPVGGG + TP PH NPKI + +DLNLAF G+ SI E +Q+ Sbjct: 41 ARPEKDQALNCPRCNSLNTKFCYYNNYSLTQPRYFCKDCRRYWTAGGSLRNIPVGGGVRKNKRSSSNSSSSSPSSSSSSKKPLFANNNTPTPPLPHLNPKIGEAAATKVQDLTFSQGFGNAHEVKDLNLAFSQGFGIGHNHHSSIPEFLQV 191
BLAST of CX300924 vs. ExPASy Swiss-Prot
Match: DOF25_ARATH (Dof zinc finger protein DOF2.5 OS=Arabidopsis thaliana GN=DOF2.5 PE=2 SV=3) HSP 1 Score: 122.865 bits (307), Expect = 5.202e-28 Identity = 70/138 (50.72%), Postives = 83/138 (60.14%), Query Frame = 3 Query: 3 ARPQKEQALNCPRCNSTNTKFCYYNNYSLTQPRYFCKTCRRYWTEGGSLRNIPVGGGXXXXXXXXXXXXXLPDPATPPSHHPHQNP------KIHD----HGQDLN-LAFPAATTQGYRSI--SELVQLPNIDNKSQI 377 ARPQ++ LNCPRCNSTNTKFCYYNNYSLTQPRYFCK CRRYWTEGGSLRN+PVGG T PS P NP +IH+ QDLN L+FP Q + + S+ +Q+P ++ I Sbjct: 74 ARPQEK--LNCPRCNSTNTKFCYYNNYSLTQPRYFCKGCRRYWTEGGSLRNVPVGGSSRKNKRSSSSSSS-NILQTIPSSLPDLNPPILFSNQIHNKSKGSSQDLNLLSFPVMQDQHHHHVHMSQFLQMPKMEGNGNI 208
BLAST of CX300924 vs. ExPASy Swiss-Prot
Match: DOF37_ARATH (Dof zinc finger protein DOF3.7 OS=Arabidopsis thaliana GN=DOF3.7 PE=1 SV=2) HSP 1 Score: 115.546 bits (288), Expect = 8.304e-26 Identity = 63/121 (52.07%), Postives = 74/121 (61.16%), Query Frame = 3 Query: 3 ARPQKEQALNCPRCNSTNTKFCYYNNYSLTQPRYFCKTCRRYWTEGGSLRNIPVGGGXXXXXXXXXXXXXLPDPATPPSHHPHQNPKI-------HDHGQDLN-LAFPAATTQGYRSISEL 341 ARPQ++ +NCPRCNSTNTKFCYYNNYSLTQPRYFCK CRRYWTEGGSLRN+PVGG L P+ P P NP I + +DLN L+FP + ++ L Sbjct: 68 ARPQEK--VNCPRCNSTNTKFCYYNNYSLTQPRYFCKGCRRYWTEGGSLRNVPVGGS---SRKNKRSSTPLASPSNPKL--PDLNPPILFSSQIPNKSNKDLNLLSFPVMQDHHHHALELL 181
BLAST of CX300924 vs. ExPASy Swiss-Prot
Match: DOF36_ARATH (Dof zinc finger protein DOF3.6 OS=Arabidopsis thaliana GN=DOF3.6 PE=1 SV=2) HSP 1 Score: 114.005 bits (284), Expect = 2.416e-25 Identity = 47/55 (85.45%), Postives = 51/55 (92.73%), Query Frame = 3 Query: 9 PQKEQALNCPRCNSTNTKFCYYNNYSLTQPRYFCKTCRRYWTEGGSLRNIPVGGG 173 P E ALNCPRC+STNTKFCY+NNYSLTQPR+FCKTCRRYWT GGSLRN+PVGGG Sbjct: 70 PLPEAALNCPRCDSTNTKFCYFNNYSLTQPRHFCKTCRRYWTRGGSLRNVPVGGG 124
BLAST of CX300924 vs. ExPASy Swiss-Prot
Match: DOF21_ARATH (Dof zinc finger protein DOF2.1 OS=Arabidopsis thaliana GN=DOF2.1 PE=2 SV=2) HSP 1 Score: 113.62 bits (283), Expect = 3.156e-25 Identity = 60/117 (51.28%), Postives = 71/117 (60.68%), Query Frame = 3 Query: 21 QALNCPRCNSTNTKFCYYNNYSLTQPRYFCKTCRRYWTEGGSLRNIPVGGGXXXXXXXXXXXXXLPDPATPPSHH--PHQNPKI---------HDHGQDLNLAFPAATTQGYRSISE 338 +A NCPRC S NTKFCYYNNYSL+QPRYFCK+CRRYWT+GG+LRN+PVGGG + + H P QNP I +DH DLNLAF AT Q + S+ Sbjct: 46 EAQNCPRCESPNTKFCYYNNYSLSQPRYFCKSCRRYWTKGGTLRNVPVGGGCRRNKRSSSSAFSKNNNNKSINFHTDPLQNPLITGMPPSSFGYDHSIDLNLAF--ATLQKHHLSSQ 160
BLAST of CX300924 vs. ExPASy Swiss-Prot
Match: DOF53_ARATH (Dof zinc finger protein DOF5.3 OS=Arabidopsis thaliana GN=DOF5.3 PE=2 SV=1) HSP 1 Score: 112.849 bits (281), Expect = 5.383e-25 Identity = 49/57 (85.96%), Postives = 53/57 (92.98%), Query Frame = 3 Query: 6 RPQK-EQALNCPRCNSTNTKFCYYNNYSLTQPRYFCKTCRRYWTEGGSLRNIPVGGG 173 RPQ E AL CPRC+STNTKFCYYNNYSLTQPRYFCK+CRRYWT+GG+LRNIPVGGG Sbjct: 47 RPQPPELALRCPRCDSTNTKFCYYNNYSLTQPRYFCKSCRRYWTKGGTLRNIPVGGG 103
BLAST of CX300924 vs. ExPASy Swiss-Prot
Match: DOF41_ARATH (Dof zinc finger protein DOF4.1 OS=Arabidopsis thaliana GN=DOF4.1 PE=2 SV=2) HSP 1 Score: 112.464 bits (280), Expect = 7.030e-25 Identity = 59/109 (54.13%), Postives = 67/109 (61.47%), Query Frame = 3 Query: 6 RPQKEQALNCPRCNSTNTKFCYYNNYSLTQPRYFCKTCRRYWTEGGSLRNIPVGGG-------XXXXXXXXXXXXXLPD---PATPPSHHPHQNP-KIHDHGQDLNLAF 299 RPQ+ + NCPRCNS+NTKFCYYNNYSL QPRY CK+CRRYWTEGGSLRN+PVGGG LPD P S NP K H + DL+L+F Sbjct: 63 RPQEPR--NCPRCNSSNTKFCYYNNYSLAQPRYLCKSCRRYWTEGGSLRNVPVGGGSRKNKKLPFPNSSTSSSTKNLPDLNPPFVFTSSASSSNPSKTHQNNNDLSLSF 169
BLAST of CX300924 vs. ExPASy Swiss-Prot
Match: PBF_MAIZE (Dof zinc finger protein PBF OS=Zea mays GN=PBF PE=1 SV=1) HSP 1 Score: 111.309 bits (277), Expect = 1.566e-24 Identity = 53/115 (46.09%), Postives = 66/115 (57.39%), Query Frame = 3 Query: 6 RPQKEQALNCPRCNSTNTKFCYYNNYSLTQPRYFCKTCRRYWTEGGSLRNIPVGGGXXXXXXXXXXXXXLPD---------PATPPSHHPHQNPKIHDHGQDL-NLAFPAATTQG 320 RPQ +AL CPRC+S NTKFCYYNNYS++QPRYFCK CRRYWT GG+LRN+P+GGG P +P ++ N I+ H + N+ P TT G Sbjct: 53 RPQLPEALKCPRCDSNNTKFCYYNNYSMSQPRYFCKACRRYWTHGGTLRNVPIGGGCRKNKHASRFVLGSHTSSSSSATYAPLSPSTNASSSNMSINKHMMMVPNMTMPTPTTMG 167
BLAST of CX300924 vs. ExPASy Swiss-Prot
Match: DOF32_ARATH (Dof zinc finger protein DOF3.2 OS=Arabidopsis thaliana GN=DOF3.2 PE=2 SV=1) HSP 1 Score: 108.612 bits (270), Expect = 1.015e-23 Identity = 53/110 (48.18%), Postives = 66/110 (60.00%), Query Frame = 3 Query: 18 EQALNCPRCNSTNTKFCYYNNYSLTQPRYFCKTCRRYWTEGGSLRNIPVGGGXXXXXXXXXXXXXL---PDP-------ATPPSHHPHQNPKIHDHGQDLNLAFPAATTQ 317 EQ+L CPRC+STNTKFCYYNNYSL+QPRYFCK+CRRYWT+GG LRNIP+GG L P+P + P + + N I + +L LA+ Q Sbjct: 37 EQSLRCPRCDSTNTKFCYYNNYSLSQPRYFCKSCRRYWTKGGILRNIPIGGAYRKHKRSSSATKSLRTTPEPTMTHDGKSFPTASFGYNNNNISNEQMELGLAYALLNKQ 146 The following BLAST results are available for this feature:
BLAST of CX300924 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 38
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Sequences
The
following sequences are available for this feature:
EST sequence >CX300924 ID=CX300924; Name=CX300924; organism=Citrus sinensis; type=EST; length=383bpback to top |