EY665125

Overview
NameEY665125
Unique NameEY665125
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length748
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig8800 contig Csv1_Contig8800:137..884. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of EY665125 vs. ExPASy Swiss-Prot
Match: COPIA_DROME (Copia protein OS=Drosophila melanogaster GN=GIP PE=1 SV=3)

HSP 1 Score: 90.1225 bits (222), Expect = 1.363e-17
Identity = 39/99 (39.39%), Postives = 65/99 (65.66%), Query Frame = 2
Query:  386 VARSSAEAEFRAMAQGICELIWLKIFLMALHMVQKETMRLYCDNKAAISIAHNPVQHDRTKHIEIDRHFIKEKIESGQICIPYVTSRKQXVDVLTEGLP 682
            VA SS EAE+ A+ + + E +WLK  L ++++  +  +++Y DN+  ISIA+NP  H R KHI+I  HF +E++++  IC+ Y+ +  Q  D+ T+ LP
Sbjct: 1289 VAASSTEAEYMALFEAVREALWLKFLLTSINIKLENPIKIYEDNQGCISIANNPSCHKRAKHIDIKYHFAREQVQNNVICLEYIPTENQLADIFTKPLP 1387          

HSP 2 Score: 81.2629 bits (199), Expect = 6.332e-15
Identity = 38/78 (48.72%), Postives = 49/78 (62.82%), Query Frame = 2
Query:  167 WREAVYEEMRALQKNDTWQLVNHPPEKKPAGCKWVFTTKHKADGTVERYKARLVAKGFSQTYGIDYQETFAPVVARSS 400
            W EA+  E+ A + N+TW +   P  K     +WVF+ K+   G   RYKARLVA+GF+Q Y IDY+ETFAPV   SS
Sbjct:  906 WEEAINTELNAHKINNTWTITKRPENKNIVDSRWVFSVKYNELGNPIRYKARLVARGFTQKYQIDYEETFAPVARISS 983          
BLAST of EY665125 vs. ExPASy Swiss-Prot
Match: M820_ARATH (Uncharacterized mitochondrial protein AtMg00820 OS=Arabidopsis thaliana GN=AtMg00820 PE=4 SV=1)

HSP 1 Score: 89.3521 bits (220), Expect = 2.325e-17
Identity = 44/86 (51.16%), Postives = 58/86 (67.44%), Query Frame = 2
Query:  131 PRNIQEDLMIPKWREAVYEEMRALQKNDTWQLVNHPPEKKPAGCKWVFTTKHKADGTVERYKARLVAKGFSQTYGIDYQETFAPVV 388
            P+++   L  P W +A+ EE+ AL +N TW LV  P  +   GCKWVF TK  +DGT++R KARLVAKGF Q  GI + ET++PVV
Sbjct:   28 PKSVIFALKDPGWCQAMQEELDALSRNKTWILVPPPVNQNILGCKWVFKTKLHSDGTLDRLKARLVAKGFHQEEGIYFVETYSPVV 113          
BLAST of EY665125 vs. ExPASy Swiss-Prot
Match: POLX_TOBAC (Retrovirus-related Pol polyprotein from transposon TNT 1-94 OS=Nicotiana tabacum PE=2 SV=1)

HSP 1 Score: 87.0409 bits (214), Expect = 1.154e-16
Identity = 51/126 (40.48%), Postives = 69/126 (54.76%), Query Frame = 2
Query:  110 MLSSYSVPRNIQEDLMIPKWRE---AVYEEMRALQKNDTWQLVNHPPEKKPAGCKWVFTTKHKADGTVERYKARLVAKGFSQTYGIDYQETFAPVVARSSAEAEFRAMAQGICELIWLKIFLMALH 478
            ++S    P +++E L  P+  +   A+ EEM +LQKN T++LV  P  K+P  CKWVF  K   D  + RYKARLV KGF Q  GID+ E F+PVV  +S        A    E+  L +    LH
Sbjct:  804 LISDDREPESLKEVLSHPEKNQLMKAMQEEMESLQKNGTYKLVELPKGKRPLKCKWVFKLKKDGDCKLVRYKARLVVKGFEQKKGIDFDEIFSPVVKMTSIRTILSLAASLDLEVEQLDVKTAFLH 929          

HSP 2 Score: 80.1073 bits (196), Expect = 1.411e-14
Identity = 40/112 (35.71%), Postives = 70/112 (62.50%), Query Frame = 2
Query:  356 IDYQETFAPVVARSSAEAEFRAMAQGICELIWLKIFLMALHMVQKETMRLYCDNKAAISIAHNPVQHDRTKHIEIDRHFIKEKIESGQICIPYVTSRKQXVDVLTEGLPKKK 691
            I +Q      VA S+ EAE+ A  +   E+IWLK FL  L + QKE + +YCD+++AI ++ N + H RTKHI++  H+I+E ++   + +  +++ +   D+LT+ +P+ K
Sbjct: 1205 ISWQSKLQKCVALSTTEAEYIAATETGKEMIWLKRFLQELGLHQKEYV-VYCDSQSAIDLSKNSMYHARTKHIDVRYHWIREMVDDESLKVLKISTNENPADMLTKVVPRNK 1315          
The following BLAST results are available for this feature:
BLAST of EY665125 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 3
Match NameE-valueIdentityDescription
COPIA_DROME1.363e-1739.39Copia protein OS=Drosophila melanogaster GN=GIP PE... [more]
M820_ARATH2.325e-1751.16Uncharacterized mitochondrial protein AtMg00820 OS... [more]
POLX_TOBAC1.154e-1640.48Retrovirus-related Pol polyprotein from transposon... [more]
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Properties
Property NameValue
Genbank descriptionCS00-C1-101-074-C11-CT.F Sweet orange leaf, infected with Xylella fastidiosa (stage 1 of 2) Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY665125 ID=EY665125; Name=EY665125; organism=Citrus sinensis; type=EST; length=748bp
TTCAGTTGAGTTTTCTGATCTTGATCTTCCGTCTTGCACTTTGCATCCAA
TTTCAAACTTTGTTTCTTGCCACATGCTGTCCTCTTCTTTTAAAGCCTTT
GTTACTGGTATGTTATCTTCTTATTCTGTCCCAAGAAACATACAGGAAGA
TCTTATGATTCCAAAGTGGAGAGAAGCTGTTTATGAAGAAATGAGAGCAT
TACAAAAGAATGACACATGGCAACTTGTGAACCATCCACCTGAAAAGAAA
CCAGCTGGATGCAAATGGGTTTTTACGACCAAACACAAAGCTGATGGCAC
GGTCGAGAGATATAAAGCAAGACTTGTGGCAAAAGGATTCTCGCAAACTT
ATGGAATCGACTACCAAGAAACCTTTGCACCTGTAGTGGCCAGGTCAAGT
GCAGAAGCTGAGTTTAGAGCAATGGCTCAAGGAATATGTGAGCTAATATG
GTTGAAGATTTTCTTGATGGCATTACATATGGTTCAAAAGGAAACAATGA
GACTTTACTGTGACAACAAGGCTGCCATCAGTATTGCTCACAATCCTGTA
CAACACGACAGGACTAAACACATTGAAATTGATAGACATTTCATCAAAGA
GAAGATTGAAAGTGGTCAAATTTGTATTCCCTATGTTACCAGCAGAAAAC
AGNCAGTAGATGTTCTCACTGAAGGCCTACCAAAAAAAAAAATTAGGAGT
TATTGGAGGAATTATTTANGAGTTATTTTCACAAAAAAAAAAAAAAAA
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