CX300920
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of CX300920 vs. ExPASy Swiss-Prot
Match: TIP1_MEDTR (Probable aquaporin TIP-type OS=Medicago truncatula GN=AQP1 PE=1 SV=1) HSP 1 Score: 88.9669 bits (219), Expect = 8.356e-18 Identity = 35/45 (77.78%), Postives = 40/45 (88.89%), Query Frame = 2 Query: 38 ALVSWSWDNHWVYWVGPLIGGGLAGIVYEFFFINQSHEQLPTTEY 172 A+VSWSW NHWVYW GPLIGGG+AG+VYE FIN +HEQLPTT+Y Sbjct: 206 AVVSWSWSNHWVYWAGPLIGGGIAGLVYEVLFINSTHEQLPTTDY 250
BLAST of CX300920 vs. ExPASy Swiss-Prot
Match: TIP1_MEDSA (Probable aquaporin TIP-type OS=Medicago sativa GN=MCP1 PE=2 SV=2) HSP 1 Score: 88.9669 bits (219), Expect = 8.356e-18 Identity = 35/45 (77.78%), Postives = 40/45 (88.89%), Query Frame = 2 Query: 38 ALVSWSWDNHWVYWVGPLIGGGLAGIVYEFFFINQSHEQLPTTEY 172 A+VSWSW NHWVYW GPLIGGG+AG+VYE FIN +HEQLPTT+Y Sbjct: 205 AVVSWSWSNHWVYWAGPLIGGGIAGLVYEVLFINSTHEQLPTTDY 249
BLAST of CX300920 vs. ExPASy Swiss-Prot
Match: TIP11_ARATH (Aquaporin TIP1-1 OS=Arabidopsis thaliana GN=TIP1-1 PE=1 SV=1) HSP 1 Score: 88.5817 bits (218), Expect = 1.091e-17 Identity = 33/45 (73.33%), Postives = 41/45 (91.11%), Query Frame = 2 Query: 38 ALVSWSWDNHWVYWVGPLIGGGLAGIVYEFFFINQSHEQLPTTEY 172 A+VSW+W NHWVYW GPL+GGG+AG++YE FFIN +HEQLPTT+Y Sbjct: 207 AVVSWTWTNHWVYWAGPLVGGGIAGLIYEVFFINTTHEQLPTTDY 251
BLAST of CX300920 vs. ExPASy Swiss-Prot
Match: TIP11_ORYSJ (Probable aquaporin TIP1-1 OS=Oryza sativa subsp. japonica GN=TIP1-1 PE=2 SV=1) HSP 1 Score: 86.2705 bits (212), Expect = 5.416e-17 Identity = 34/45 (75.56%), Postives = 41/45 (91.11%), Query Frame = 2 Query: 38 ALVSWSWDNHWVYWVGPLIGGGLAGIVYEFFFINQSHEQLPTTEY 172 ALVSWSW++ WVYWVGPLIGGGLAG++YE FI+ +HEQLPTT+Y Sbjct: 206 ALVSWSWESQWVYWVGPLIGGGLAGVIYEVLFISHTHEQLPTTDY 250
BLAST of CX300920 vs. ExPASy Swiss-Prot
Match: TIP12_ARATH (Aquaporin TIP1-2 OS=Arabidopsis thaliana GN=TIP1-2 PE=1 SV=2) HSP 1 Score: 83.9593 bits (206), Expect = 2.688e-16 Identity = 34/46 (73.91%), Postives = 42/46 (91.30%), Query Frame = 2 Query: 38 ALVSWSWDNHWVYWVGPLIGGGLAGIVYEFFFINQ-SHEQLPTTEY 172 A+VSW+W NHWVYW GPLIGGGLAGI+Y+F FI++ +HEQLPTT+Y Sbjct: 208 AVVSWTWTNHWVYWAGPLIGGGLAGIIYDFVFIDENAHEQLPTTDY 253
BLAST of CX300920 vs. ExPASy Swiss-Prot
Match: TIP11_MAIZE (Aquaporin TIP1-1 OS=Zea mays GN=TIP1-1 PE=2 SV=1) HSP 1 Score: 81.2629 bits (199), Expect = 1.742e-15 Identity = 32/45 (71.11%), Postives = 38/45 (84.44%), Query Frame = 2 Query: 38 ALVSWSWDNHWVYWVGPLIGGGLAGIVYEFFFINQSHEQLPTTEY 172 ALVSW W WVYWVGPLIGGGLAG++YE FI+ +HEQLP+T+Y Sbjct: 206 ALVSWEWGYQWVYWVGPLIGGGLAGVIYELLFISHTHEQLPSTDY 250 The following BLAST results are available for this feature:
BLAST of CX300920 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 6
Properties
Sequences
The
following sequences are available for this feature:
EST sequence >CX300920 ID=CX300920; Name=CX300920; organism=Citrus sinensis; type=EST; length=379bpback to top |