CV719201

Overview
NameCV719201
Unique NameCV719201
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length769
Libraries
Library NameType
Parent Washington Navel Orange Callus cDNA Library UCRCS08-1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
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BLAST of CV719201 vs. ExPASy Swiss-Prot
Match: AB11I_ARATH (ABC transporter I family member 11, chloroplastic OS=Arabidopsis thaliana GN=ABCI11 PE=2 SV=1)

HSP 1 Score: 70.8626 bits (172), Expect = 9.002e-12
Identity = 33/44 (75.00%), Postives = 39/44 (88.64%), Query Frame = -1 
Query:  638 LLKHLKKELTILVVSHDLKEMAALVDHSWRMDMGGFLVEQRIPV 769
            LLKHLKKELT+LVVSHDL+E+AALVD SWRM+ GG LV +R P+
Sbjct:  235 LLKHLKKELTLLVVSHDLRELAALVDQSWRMETGGVLVAERPPL 278
The following BLAST results are available for this feature:
BLAST of CV719201 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 1
Match NameE-valueIdentityDescription
AB11I_ARATH9.002e-1275.00ABC transporter I family member 11, chloroplastic ... [more]
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Properties
Property NameValue
Genbank descriptionUCRCS08_0011J18_r Parent Washington Navel Orange Callus cDNA Library UCRCS08-1 Citrus sinensis cDNA clone CS_AEa0011J18, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CV719201 ID=CV719201; Name=CV719201; organism=Citrus sinensis; type=EST; length=769bp
TTTTTTTACTGGATAACATATTTTTCCCATTTTTATTTTATCAATCCTGT
AACATGATTGCAGGAGTATCATCAATCCCTATCATACAAGAATGTTACAT
GTTACACAATAAATTTTTTGGGAGGGAATCTTTGTCAAATAAAGATGATA
ACTTCAGGCATATATACTGGATAATATTATTTCTGTTCTAACTATATATA
AGTGCCATGCAGGTGATACAAATGTTCCACAGGAAAATTCACCCTGAAAA
GTCTATAGCTGAAAAGGAGTTAAAATCCCGCACCAATAAGATCAAGAGCA
GTCCTTATGAGGGTGTCCACACTGATGGAGGCCTGGACAATGACAACAAA
AGTTCTCCCCCGGGATGTGAGTCGAAGGACCAGATAGAATATCACAAGAT
CGAAAAAATGTTGTCCCAATATGGGCTTAGGGGCAGTACTTCAAGTGGAA
ATAGGGAGCACGTAGACAAATTCTTAGGAAGAAAAAATGCCATGATGCCA
ATAGGCTTTCAGCATGCATTCCAGCATGCCAGTTCTACTTCTTGTCCAGA
GGAGAATAGAATGACAGTTTTACTCAACTTCTAACAACTCATAGTATAAT
GTATTGGAAAGGTAGGAAGTAGCTGACTCCCAAATTACACCGGTATGCGC
TGTTCAACCAGAAATCCACCCATGTCCATCCTCCAAGAATGATCAACCAG
AGCTGCCATCTCTTTGAGGTCATGACTAACAACAAGTATAGTTAATTCTT
TCTTCAAATGCTTCAAAAG
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