EH406453

Overview
NameEH406453
Unique NameEH406453
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length575
Libraries
Library NameType
AbsCFruitcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of EH406453 vs. ExPASy Swiss-Prot
Match: MDHG_CITLA (Malate dehydrogenase, glyoxysomal OS=Citrullus lanatus PE=1 SV=1)

HSP 1 Score: 149.828 bits (377), Expect = 4.372e-40
Identity = 74/85 (87.06%), Postives = 79/85 (92.94%), Query Frame = 1
Query:    1 VVEAKTGAGSATLSMAYAAAKFADACLRGLRGDAGVIECAYVASTVTELPFFASKVRLGRAGIEEIYSLGPLNEYERAGLERQRK 255
            VVEAK GAGSATLSMAYAA KFADACLRGLRGDAGVIECA+V+S VTELPFFASKVRLGR GIEE+YSLGPLNEYER GLE+ +K
Sbjct:  257 VVEAKAGAGSATLSMAYAAVKFADACLRGLRGDAGVIECAFVSSQVTELPFFASKVRLGRNGIEEVYSLGPLNEYERIGLEKAKK 341          

HSP 2 Score: 35.8094 bits (81), Expect = 4.372e-40
Identity = 16/18 (88.89%), Postives = 18/18 (100.00%), Query Frame = 3
Query:  243 KAKKELAGSIQKGVSFVR 296
            KAKKELAGSI+KGVSF+R
Sbjct:  338 KAKKELAGSIEKGVSFIR 355          
BLAST of EH406453 vs. ExPASy Swiss-Prot
Match: MDHG_CUCSA (Malate dehydrogenase, glyoxysomal OS=Cucumis sativus GN=MDHG PE=2 SV=1)

HSP 1 Score: 147.132 bits (370), Expect = 2.786e-39
Identity = 71/85 (83.53%), Postives = 79/85 (92.94%), Query Frame = 1
Query:    1 VVEAKTGAGSATLSMAYAAAKFADACLRGLRGDAGVIECAYVASTVTELPFFASKVRLGRAGIEEIYSLGPLNEYERAGLERQRK 255
            VVEAK GAGSATLSMAYAA KFADACLRGLRGDAGV+ECA+V+S VTELPFFA+KVRLGR GI+E+YSLGPLNEYER GLE+ +K
Sbjct:  257 VVEAKAGAGSATLSMAYAAVKFADACLRGLRGDAGVVECAFVSSQVTELPFFATKVRLGRNGIDEVYSLGPLNEYERIGLEKAKK 341          

HSP 2 Score: 35.8094 bits (81), Expect = 2.786e-39
Identity = 16/18 (88.89%), Postives = 18/18 (100.00%), Query Frame = 3
Query:  243 KAKKELAGSIQKGVSFVR 296
            KAKKELAGSI+KGVSF+R
Sbjct:  338 KAKKELAGSIEKGVSFIR 355          
BLAST of EH406453 vs. ExPASy Swiss-Prot
Match: MDHG2_BRANA (Malate dehydrogenase 2, glyoxysomal OS=Brassica napus GN=MDH2 PE=3 SV=1)

HSP 1 Score: 139.428 bits (350), Expect = 5.525e-37
Identity = 68/85 (80.00%), Postives = 76/85 (89.41%), Query Frame = 1
Query:    1 VVEAKTGAGSATLSMAYAAAKFADACLRGLRGDAGVIECAYVASTVTELPFFASKVRLGRAGIEEIYSLGPLNEYERAGLERQRK 255
            VVEAK GAGSATLSMAYAAAKFADACLRGLRGDA VIEC++VAS VTEL FFA+KVRLGR G EE++ LGPLNEYER GLE+ ++
Sbjct:  259 VVEAKAGAGSATLSMAYAAAKFADACLRGLRGDANVIECSFVASQVTELAFFATKVRLGRTGAEEVFQLGPLNEYERVGLEKAKE 343          

HSP 2 Score: 35.8094 bits (81), Expect = 5.525e-37
Identity = 16/19 (84.21%), Postives = 18/19 (94.74%), Query Frame = 3
Query:  243 KAKKELAGSIQKGVSFVRK 299
            KAK+ELAGSIQKGV F+RK
Sbjct:  340 KAKEELAGSIQKGVDFIRK 358          
BLAST of EH406453 vs. ExPASy Swiss-Prot
Match: MDHG1_BRANA (Malate dehydrogenase 1, glyoxysomal OS=Brassica napus GN=MDH1 PE=2 SV=2)

HSP 1 Score: 139.428 bits (350), Expect = 5.525e-37
Identity = 68/85 (80.00%), Postives = 76/85 (89.41%), Query Frame = 1
Query:    1 VVEAKTGAGSATLSMAYAAAKFADACLRGLRGDAGVIECAYVASTVTELPFFASKVRLGRAGIEEIYSLGPLNEYERAGLERQRK 255
            VVEAK GAGSATLSMAYAAAKFADACLRGLRGDA VIEC++VAS VTEL FFA+KVRLGR G EE++ LGPLNEYER GLE+ ++
Sbjct:  259 VVEAKAGAGSATLSMAYAAAKFADACLRGLRGDANVIECSFVASQVTELAFFATKVRLGRTGAEEVFQLGPLNEYERVGLEKAKE 343          

HSP 2 Score: 35.8094 bits (81), Expect = 5.525e-37
Identity = 16/19 (84.21%), Postives = 18/19 (94.74%), Query Frame = 3
Query:  243 KAKKELAGSIQKGVSFVRK 299
            KAK+ELAGSIQKGV F+RK
Sbjct:  340 KAKEELAGSIQKGVDFIRK 358          
BLAST of EH406453 vs. ExPASy Swiss-Prot
Match: MDHG_SOYBN (Malate dehydrogenase, glyoxysomal OS=Glycine max PE=2 SV=2)

HSP 1 Score: 140.198 bits (352), Expect = 5.526e-37
Identity = 69/85 (81.18%), Postives = 74/85 (87.06%), Query Frame = 1
Query:    1 VVEAKTGAGSATLSMAYAAAKFADACLRGLRGDAGVIECAYVASTVTELPFFASKVRLGRAGIEEIYSLGPLNEYERAGLERQRK 255
            VVEAK GAGSATLSMAYAA KFADACL  LRGDAG+IECAYVAS VTELPFFASKVRLGR G+EEI  LGPLN+YER  LE+ +K
Sbjct:  254 VVEAKAGAGSATLSMAYAAVKFADACLHALRGDAGIIECAYVASQVTELPFFASKVRLGRVGVEEILPLGPLNDYERESLEKAKK 338          

HSP 2 Score: 35.039 bits (79), Expect = 5.526e-37
Identity = 15/19 (78.95%), Postives = 18/19 (94.74%), Query Frame = 3
Query:  243 KAKKELAGSIQKGVSFVRK 299
            KAKKELA SI+KG+SF+RK
Sbjct:  335 KAKKELAASIEKGISFIRK 353          
BLAST of EH406453 vs. ExPASy Swiss-Prot
Match: MDHG1_ARATH (Malate dehydrogenase, glyoxysomal OS=Arabidopsis thaliana GN=At5g09660 PE=1 SV=1)

HSP 1 Score: 139.813 bits (351), Expect = 7.198e-37
Identity = 68/84 (80.95%), Postives = 75/84 (89.29%), Query Frame = 1
Query:    1 VVEAKTGAGSATLSMAYAAAKFADACLRGLRGDAGVIECAYVASTVTELPFFASKVRLGRAGIEEIYSLGPLNEYERAGLERQR 252
            VVEAK GAGSATLSMAYAAAKFADACLRGLRGDA V+EC++VAS VTEL FFA+KVRLGR G EE+Y LGPLNEYER GLE+ +
Sbjct:  255 VVEAKAGAGSATLSMAYAAAKFADACLRGLRGDANVVECSFVASQVTELAFFATKVRLGRTGAEEVYQLGPLNEYERIGLEKAK 338          

HSP 2 Score: 35.039 bits (79), Expect = 7.198e-37
Identity = 16/19 (84.21%), Postives = 17/19 (89.47%), Query Frame = 3
Query:  243 KAKKELAGSIQKGVSFVRK 299
            KAK ELAGSIQKGV F+RK
Sbjct:  336 KAKDELAGSIQKGVEFIRK 354          
BLAST of EH406453 vs. ExPASy Swiss-Prot
Match: MDHG2_ARATH (Probable malate dehydrogenase, glyoxysomal OS=Arabidopsis thaliana GN=At2g22780 PE=1 SV=1)

HSP 1 Score: 145.591 bits (366), Expect = 9.377e-37
Identity = 70/85 (82.35%), Postives = 77/85 (90.59%), Query Frame = 1
Query:    1 VVEAKTGAGSATLSMAYAAAKFADACLRGLRGDAGVIECAYVASTVTELPFFASKVRLGRAGIEEIYSLGPLNEYERAGLERQRK 255
            VVEAK GAGSATLSMAYAA +FADACLRGLRGDA ++ECAYVAS VTELPFFASKVRLGR GI+E+Y LGPLNEYER GLE+ +K
Sbjct:  255 VVEAKAGAGSATLSMAYAAVEFADACLRGLRGDANIVECAYVASHVTELPFFASKVRLGRCGIDEVYGLGPLNEYERMGLEKAKK 339          

HSP 2 Score: 28.8758 bits (63), Expect = 9.377e-37
Identity = 13/19 (68.42%), Postives = 16/19 (84.21%), Query Frame = 3
Query:  243 KAKKELAGSIQKGVSFVRK 299
            KAKKEL+ SI KGV+F +K
Sbjct:  336 KAKKELSVSIHKGVTFAKK 354          
BLAST of EH406453 vs. ExPASy Swiss-Prot
Match: MDHG_ORYSJ (Malate dehydrogenase, glyoxysomal OS=Oryza sativa subsp. japonica GN=Os12g0632700 PE=1 SV=3)

HSP 1 Score: 149.443 bits (376), Expect = 1.136e-35
Identity = 73/93 (78.49%), Postives = 84/93 (90.32%), Query Frame = 1
Query:    1 VVEAKTGAGSATLSMAYAAAKFADACLRGLRGDAGVIECAYVASTVTELPFFASKVRLGRAGIEEIYSLGPLNEYERAGLERQRKS*REAFRR 279
            VVEAK GAGSATLSMAYAA+KFADACLRGLRGDAG++EC++VAS VTELPFFASKVRLGR GIEEI SLGPLNE+ERAGLE+ +K   E+ ++
Sbjct:  257 VVEAKAGAGSATLSMAYAASKFADACLRGLRGDAGIVECSFVASQVTELPFFASKVRLGRCGIEEILSLGPLNEFERAGLEKAKKELAESIQK 349          
BLAST of EH406453 vs. ExPASy Swiss-Prot
Match: MDHM1_ARATH (Malate dehydrogenase 1, mitochondrial OS=Arabidopsis thaliana GN=At1g53240 PE=1 SV=1)

HSP 1 Score: 120.553 bits (301), Expect = 5.652e-27
Identity = 58/81 (71.60%), Postives = 68/81 (83.95%), Query Frame = 1
Query:    1 VVEAKTGAGSATLSMAYAAAKFADACLRGLRGDAGVIECAYVASTVTELPFFASKVRLGRAGIEEIYSLGPLNEYERAGLE 243
            VVEAK G GSATLSMAYA A FADACL+GL G   VIEC+YV ST+TELPFFASKVRLG+ G+EE+  LGPL+++E+ GLE
Sbjct:  242 VVEAKAGKGSATLSMAYAGALFADACLKGLNGVPDVIECSYVQSTITELPFFASKVRLGKNGVEEVLDLGPLSDFEKEGLE 322          
BLAST of EH406453 vs. ExPASy Swiss-Prot
Match: MDHM2_ARATH (Malate dehydrogenase 2, mitochondrial OS=Arabidopsis thaliana GN=At3g15020 PE=1 SV=1)

HSP 1 Score: 119.013 bits (297), Expect = 1.644e-26
Identity = 56/81 (69.14%), Postives = 68/81 (83.95%), Query Frame = 1
Query:    1 VVEAKTGAGSATLSMAYAAAKFADACLRGLRGDAGVIECAYVASTVTELPFFASKVRLGRAGIEEIYSLGPLNEYERAGLE 243
            VVEAK G GSATLSMAYA A FADACL+GL G   V+EC++V ST+TELPFFASKVRLG+ G+EE+  LGPL+++E+ GLE
Sbjct:  242 VVEAKAGKGSATLSMAYAGALFADACLKGLNGVPNVVECSFVQSTITELPFFASKVRLGKNGVEEVLDLGPLSDFEKEGLE 322          
The following BLAST results are available for this feature:
BLAST of EH406453 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 143
Match NameE-valueIdentityDescription
MDHG_CITLA4.372e-4087.06Malate dehydrogenase, glyoxysomal OS=Citrullus lan... [more]
MDHG_CUCSA2.786e-3983.53Malate dehydrogenase, glyoxysomal OS=Cucumis sativ... [more]
MDHG2_BRANA5.525e-3780.00Malate dehydrogenase 2, glyoxysomal OS=Brassica na... [more]
MDHG1_BRANA5.525e-3780.00Malate dehydrogenase 1, glyoxysomal OS=Brassica na... [more]
MDHG_SOYBN5.526e-3781.18Malate dehydrogenase, glyoxysomal OS=Glycine max P... [more]
MDHG1_ARATH7.198e-3780.95Malate dehydrogenase, glyoxysomal OS=Arabidopsis t... [more]
MDHG2_ARATH9.377e-3782.35Probable malate dehydrogenase, glyoxysomal OS=Arab... [more]
MDHG_ORYSJ1.136e-3578.49Malate dehydrogenase, glyoxysomal OS=Oryza sativa ... [more]
MDHM1_ARATH5.652e-2771.60Malate dehydrogenase 1, mitochondrial OS=Arabidops... [more]
MDHM2_ARATH1.644e-2669.14Malate dehydrogenase 2, mitochondrial OS=Arabidops... [more]

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Properties
Property NameValue
Genbank descriptionKN0AAK2AG05FM1 AbsCFruit Citrus sinensis cDNA 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EH406453 ID=EH406453; Name=EH406453; organism=Citrus sinensis; type=EST; length=575bp
GTAGTTGAGGCAAAAACTGGAGCTGGTTCGGCCACTCTATCGATGGCATA
TGCTGCTGCCAAGTTTGCCGATGCTTGTCTCCGAGGCTTGAGGGGGGATG
CCGGTGTTATTGAGTGTGCATACGTGGCTTCTACGGTGACTGAACTCCCT
TTCTTTGCATCCAAGGTACGGCTTGGCCGTGCTGGAATTGAGGAAATTTA
CTCACTTGGCCCATTGAATGAGTATGAGAGGGCTGGTTTGGAAAGGCAAA
GAAAGAGTTAGCGGGAAGCATTCAGAAGGGAGTCAGTTTTGTCAGGAAAT
GAGTAACCAATCACATGGTGACTAATGATAATGGTTGTGCTTTTGTTGTT
TGCCTCAAATATCTCAAGATTACTTTCCCCAGAATAAGAGGTAGGGTTTT
CGTTTTTCCATAATCAGATTGAATTAAGTTAGTTACAAAGAAGAAGCAAA
AGATTCATCTTAGTGGGGTTGGTTTGGTTCTTTTGATATTCTTGTAATGA
AGGGATAAAGAATATGTAGATGACGAACTGCCGCCTGTTTTATCATTTTA
ATCAATTCAAAATCAGAGTTCATAC
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