EY665107

Overview
NameEY665107
Unique NameEY665107
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length700
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig9540 contig Csv1_Contig9540:332..1029. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
[Close]
BLAST of EY665107 vs. ExPASy Swiss-Prot
Match: CB2G_SOLLC (Chlorophyll a-b binding protein 3C, chloroplastic OS=Solanum lycopersicum GN=CAB3C PE=3 SV=1)

HSP 1 Score: 370.548 bits (950), Expect = 4.626e-102
Identity = 177/183 (96.72%), Postives = 181/183 (98.91%), Query Frame = 3 
Query:   12 GLSSDPETFAKNRELEVIHCRWAMLGALGCVFPELLARNGVKFGEAVWFKAGAHIFSEGGLDYLGNPSLIHAQSILAIWACQVVLMGAVEGYRIAGGPLGEVTDPLYPGGSFDPLGLADDPEAFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGPLENLADHLADPVNNNAWAYATNFVPGK 560
            GLS+DPETFAKNRELEVIHCRWAMLGALGCVFPELLARNGVKFGEAVWFKAG+ IFSEGGLDYLGNPSL+HAQSILAIWACQVVLMGAVEGYRIAGGPLGEV DPLYPGGSFDPLGLADDPEAFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGPLENLADHLADPVNNNAWA+ATNFVPGK
Sbjct:   85 GLSADPETFAKNRELEVIHCRWAMLGALGCVFPELLARNGVKFGEAVWFKAGSQIFSEGGLDYLGNPSLVHAQSILAIWACQVVLMGAVEGYRIAGGPLGEVVDPLYPGGSFDPLGLADDPEAFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGPLENLADHLADPVNNNAWAFATNFVPGK 267
[Close]
BLAST of EY665107 vs. ExPASy Swiss-Prot
Match: CB27_TOBAC (Chlorophyll a-b binding protein 7, chloroplastic OS=Nicotiana tabacum GN=CAB7 PE=3 SV=1)

HSP 1 Score: 370.548 bits (950), Expect = 4.626e-102
Identity = 175/183 (95.63%), Postives = 181/183 (98.91%), Query Frame = 3 
Query:   12 GLSSDPETFAKNRELEVIHCRWAMLGALGCVFPELLARNGVKFGEAVWFKAGAHIFSEGGLDYLGNPSLIHAQSILAIWACQVVLMGAVEGYRIAGGPLGEVTDPLYPGGSFDPLGLADDPEAFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGPLENLADHLADPVNNNAWAYATNFVPGK 560
            GLS+DPETFAKNRELEVIHCRWAMLGALGCVFPELLARNGVKFGEAVWFKAG+ IFSEGGLDYLGNPSL+HAQSILAIWACQVVLMGA+EGYR+AGGPLGEVTDPLYPGGSFDPLGLADDPEAFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGPL+NL DHLADPVNNNAWAYATNFVPGK
Sbjct:   85 GLSADPETFAKNRELEVIHCRWAMLGALGCVFPELLARNGVKFGEAVWFKAGSQIFSEGGLDYLGNPSLVHAQSILAIWACQVVLMGAIEGYRVAGGPLGEVTDPLYPGGSFDPLGLADDPEAFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGPLDNLVDHLADPVNNNAWAYATNFVPGK 267
[Close]
BLAST of EY665107 vs. ExPASy Swiss-Prot
Match: CB24_TOBAC (Chlorophyll a-b binding protein 40, chloroplastic OS=Nicotiana tabacum GN=CAB40 PE=2 SV=1)

HSP 1 Score: 370.163 bits (949), Expect = 6.041e-102
Identity = 176/183 (96.17%), Postives = 181/183 (98.91%), Query Frame = 3 
Query:   12 GLSSDPETFAKNRELEVIHCRWAMLGALGCVFPELLARNGVKFGEAVWFKAGAHIFSEGGLDYLGNPSLIHAQSILAIWACQVVLMGAVEGYRIAGGPLGEVTDPLYPGGSFDPLGLADDPEAFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGPLENLADHLADPVNNNAWAYATNFVPGK 560
            GLS+DPETFAKNRELEVIHCRWAMLGALGCVFPELLARNGVKFGEAVWFKAG+ IFSEGGLDYLGNPSL+HAQSILAIWACQVVLMGAVEGYR+AGGPLGEV DPLYPGGSFDPLGLA+DPEAFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGPLENLADHLADPVNNNAWAYATNFVPGK
Sbjct:   85 GLSADPETFAKNRELEVIHCRWAMLGALGCVFPELLARNGVKFGEAVWFKAGSQIFSEGGLDYLGNPSLVHAQSILAIWACQVVLMGAVEGYRVAGGPLGEVVDPLYPGGSFDPLGLAEDPEAFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGPLENLADHLADPVNNNAWAYATNFVPGK 267
[Close]
BLAST of EY665107 vs. ExPASy Swiss-Prot
Match: CB2B_PINSY (Chlorophyll a-b binding protein type 2 member 1B, chloroplastic OS=Pinus sylvestris PE=2 SV=1)

HSP 1 Score: 369.777 bits (948), Expect = 7.890e-102
Identity = 175/183 (95.63%), Postives = 181/183 (98.91%), Query Frame = 3 
Query:   12 GLSSDPETFAKNRELEVIHCRWAMLGALGCVFPELLARNGVKFGEAVWFKAGAHIFSEGGLDYLGNPSLIHAQSILAIWACQVVLMGAVEGYRIAGGPLGEVTDPLYPGGSFDPLGLADDPEAFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGPLENLADHLADPVNNNAWAYATNFVPGK 560
            GLS+DPE FAKNRELEVIHCRWAMLGALGCVFPELLARNGVKFGEAVWFKAGA IFSEGGLDYLGNPSL+HAQSILAIWACQV+LMGAVEGYRIAGGPLGEVTDP+YPGGSFDPLGLA+DPEAFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGP+ENLADHLADPVNNNAWAYATNFVPGK
Sbjct:   92 GLSADPENFAKNRELEVIHCRWAMLGALGCVFPELLARNGVKFGEAVWFKAGAQIFSEGGLDYLGNPSLVHAQSILAIWACQVILMGAVEGYRIAGGPLGEVTDPIYPGGSFDPLGLAEDPEAFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGPIENLADHLADPVNNNAWAYATNFVPGK 274
[Close]
BLAST of EY665107 vs. ExPASy Swiss-Prot
Match: CB22_TOBAC (Chlorophyll a-b binding protein 21, chloroplastic OS=Nicotiana tabacum GN=CAB21 PE=2 SV=1)

HSP 1 Score: 369.777 bits (948), Expect = 7.890e-102
Identity = 175/183 (95.63%), Postives = 181/183 (98.91%), Query Frame = 3 
Query:   12 GLSSDPETFAKNRELEVIHCRWAMLGALGCVFPELLARNGVKFGEAVWFKAGAHIFSEGGLDYLGNPSLIHAQSILAIWACQVVLMGAVEGYRIAGGPLGEVTDPLYPGGSFDPLGLADDPEAFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGPLENLADHLADPVNNNAWAYATNFVPGK 560
            GLS+DPETFAKNRELEVIHCRWAMLGALGCVFPELLARNGVKFGEAVWFKAG+ IFSEGGLDYLGNPSL+HAQSILAIWACQV+LMGAVEGYR+AGGPLGEV DPLYPGGSFDPLGLA+DPEAFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGPLENLADHLADPVNNNAWAYATNFVPGK
Sbjct:   83 GLSADPETFAKNRELEVIHCRWAMLGALGCVFPELLARNGVKFGEAVWFKAGSQIFSEGGLDYLGNPSLVHAQSILAIWACQVILMGAVEGYRVAGGPLGEVVDPLYPGGSFDPLGLAEDPEAFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGPLENLADHLADPVNNNAWAYATNFVPGK 265
[Close]
BLAST of EY665107 vs. ExPASy Swiss-Prot
Match: CB2B_SOLLC (Chlorophyll a-b binding protein 1B, chloroplastic OS=Solanum lycopersicum GN=CAB1B PE=3 SV=1)

HSP 1 Score: 369.007 bits (946), Expect = 1.346e-101
Identity = 176/183 (96.17%), Postives = 181/183 (98.91%), Query Frame = 3 
Query:   12 GLSSDPETFAKNRELEVIHCRWAMLGALGCVFPELLARNGVKFGEAVWFKAGAHIFSEGGLDYLGNPSLIHAQSILAIWACQVVLMGAVEGYRIAGGPLGEVTDPLYPGGSFDPLGLADDPEAFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGPLENLADHLADPVNNNAWAYATNFVPGK 560
            GLS+DPETFAKNRELEVIHCRWAMLGALGCVFPELLARNGVKFGEAVWFKAG+ IFSEGGLDYLGNPSL+HAQSILAIWACQVVLMGAVEGYRIAGGPLGEV DPLYPGGSFDPLGLA+DPEAFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGPLENLADHLADPVNNNAWA+ATNFVPGK
Sbjct:   83 GLSADPETFAKNRELEVIHCRWAMLGALGCVFPELLARNGVKFGEAVWFKAGSQIFSEGGLDYLGNPSLVHAQSILAIWACQVVLMGAVEGYRIAGGPLGEVVDPLYPGGSFDPLGLAEDPEAFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGPLENLADHLADPVNNNAWAFATNFVPGK 265
[Close]
BLAST of EY665107 vs. ExPASy Swiss-Prot
Match: CB21_TOBAC (Chlorophyll a-b binding protein 16, chloroplastic OS=Nicotiana tabacum GN=CAB16 PE=2 SV=1)

HSP 1 Score: 369.007 bits (946), Expect = 1.346e-101
Identity = 175/183 (95.63%), Postives = 181/183 (98.91%), Query Frame = 3 
Query:   12 GLSSDPETFAKNRELEVIHCRWAMLGALGCVFPELLARNGVKFGEAVWFKAGAHIFSEGGLDYLGNPSLIHAQSILAIWACQVVLMGAVEGYRIAGGPLGEVTDPLYPGGSFDPLGLADDPEAFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGPLENLADHLADPVNNNAWAYATNFVPGK 560
            GLS+DPETFAKNRELEVIHCRWAMLGALGCVFPELLARNGVKFGEAVWFKAG+ IFSEGGLDYLGNPSL+HAQSILAIWACQVVLMGAVEGYR+AGGPLGEV DPLYPGGSFDPLGLA+DPEAFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGPLENLADHLADPVNNNAW+YATNFVPGK
Sbjct:   84 GLSADPETFAKNRELEVIHCRWAMLGALGCVFPELLARNGVKFGEAVWFKAGSQIFSEGGLDYLGNPSLVHAQSILAIWACQVVLMGAVEGYRVAGGPLGEVVDPLYPGGSFDPLGLAEDPEAFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGPLENLADHLADPVNNNAWSYATNFVPGK 266
[Close]
BLAST of EY665107 vs. ExPASy Swiss-Prot
Match: CB25_PETSP (Chlorophyll a-b binding protein 91R, chloroplastic OS=Petunia sp. GN=CAB91R PE=3 SV=1)

HSP 1 Score: 368.237 bits (944), Expect = 2.296e-101
Identity = 175/182 (96.15%), Postives = 180/182 (98.90%), Query Frame = 3 
Query:   15 LSSDPETFAKNRELEVIHCRWAMLGALGCVFPELLARNGVKFGEAVWFKAGAHIFSEGGLDYLGNPSLIHAQSILAIWACQVVLMGAVEGYRIAGGPLGEVTDPLYPGGSFDPLGLADDPEAFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGPLENLADHLADPVNNNAWAYATNFVPGK 560
            LS+DPETFAKNRELEVIHCRWAMLGALGCVFPELLARNGVKFGEAVWFKAG+ IFSEGGLDYLGNPSL+HAQSILAIWACQVVLMGAVEGYR+AGGPLGEV DPLYPGGSFDPLGLADDPEAFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGPLENLADHLADPVNNNAW+YATNFVPGK
Sbjct:   86 LSADPETFAKNRELEVIHCRWAMLGALGCVFPELLARNGVKFGEAVWFKAGSQIFSEGGLDYLGNPSLVHAQSILAIWACQVVLMGAVEGYRVAGGPLGEVVDPLYPGGSFDPLGLADDPEAFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGPLENLADHLADPVNNNAWSYATNFVPGK 267
[Close]
BLAST of EY665107 vs. ExPASy Swiss-Prot
Match: CB24_PETSP (Chlorophyll a-b binding protein 25, chloroplastic OS=Petunia sp. GN=CAB25 PE=3 SV=1)

HSP 1 Score: 368.237 bits (944), Expect = 2.296e-101
Identity = 175/183 (95.63%), Postives = 180/183 (98.36%), Query Frame = 3 
Query:   12 GLSSDPETFAKNRELEVIHCRWAMLGALGCVFPELLARNGVKFGEAVWFKAGAHIFSEGGLDYLGNPSLIHAQSILAIWACQVVLMGAVEGYRIAGGPLGEVTDPLYPGGSFDPLGLADDPEAFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGPLENLADHLADPVNNNAWAYATNFVPGK 560
            GLS+DPETFAKNRELEVIHCRWAMLGALGCVFPEL ARNGVKFGEAVWFKAG+ IFSEGGLDYLGNPSL+HAQSILAIWACQVVLMGAVEGYR+AGGPLGEV DPLYPGGSFDPLGLADDPEAFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGPLENLADHLADPVNNNAWA+ATNFVPGK
Sbjct:   84 GLSADPETFAKNRELEVIHCRWAMLGALGCVFPELFARNGVKFGEAVWFKAGSQIFSEGGLDYLGNPSLVHAQSILAIWACQVVLMGAVEGYRVAGGPLGEVIDPLYPGGSFDPLGLADDPEAFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGPLENLADHLADPVNNNAWAFATNFVPGK 266
[Close]
BLAST of EY665107 vs. ExPASy Swiss-Prot
Match: CB2A_SPIOL (Chlorophyll a-b binding protein, chloroplastic OS=Spinacia oleracea PE=1 SV=1)

HSP 1 Score: 367.851 bits (943), Expect = 2.998e-101
Identity = 175/183 (95.63%), Postives = 180/183 (98.36%), Query Frame = 3 
Query:   12 GLSSDPETFAKNRELEVIHCRWAMLGALGCVFPELLARNGVKFGEAVWFKAGAHIFSEGGLDYLGNPSLIHAQSILAIWACQVVLMGAVEGYRIAGGPLGEVTDPLYPGGSFDPLGLADDPEAFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGPLENLADHLADPVNNNAWAYATNFVPGK 560
            GLS+DPETFAKNRELEVIHCRWAMLGALGCVFPELLARNGVKFGEAVWFKAG+ IFSEGGLDYLGNPSL+HAQSILAIWACQV+LMGAVEGYRIAGGPLGEV DPLYPGGSFDPLGLADDPEAFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGPLENLADHLADPVNNNAW +ATNFVPGK
Sbjct:   85 GLSADPETFAKNRELEVIHCRWAMLGALGCVFPELLARNGVKFGEAVWFKAGSQIFSEGGLDYLGNPSLVHAQSILAIWACQVILMGAVEGYRIAGGPLGEVVDPLYPGGSFDPLGLADDPEAFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGPLENLADHLADPVNNNAWNFATNFVPGK 267
The following BLAST results are available for this feature:
BLAST of EY665107 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 81
Match NameE-valueIdentityDescription
CB2G_SOLLC4.626e-10296.72Chlorophyll a-b binding protein 3C, chloroplastic ... [more]
CB27_TOBAC4.626e-10295.63Chlorophyll a-b binding protein 7, chloroplastic O... [more]
CB24_TOBAC6.041e-10296.17Chlorophyll a-b binding protein 40, chloroplastic ... [more]
CB2B_PINSY7.890e-10295.63Chlorophyll a-b binding protein type 2 member 1B, ... [more]
CB22_TOBAC7.890e-10295.63Chlorophyll a-b binding protein 21, chloroplastic ... [more]
CB2B_SOLLC1.346e-10196.17Chlorophyll a-b binding protein 1B, chloroplastic ... [more]
CB21_TOBAC1.346e-10195.63Chlorophyll a-b binding protein 16, chloroplastic ... [more]
CB25_PETSP2.296e-10196.15Chlorophyll a-b binding protein 91R, chloroplastic... [more]
CB24_PETSP2.296e-10195.63Chlorophyll a-b binding protein 25, chloroplastic ... [more]
CB2A_SPIOL2.998e-10195.63Chlorophyll a-b binding protein, chloroplastic OS=... [more]

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Properties
Property NameValue
Genbank descriptionCS00-C1-101-074-B04-CT.F Sweet orange leaf, infected with Xylella fastidiosa (stage 1 of 2) Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY665107 ID=EY665107; Name=EY665107; organism=Citrus sinensis; type=EST; length=700bp
CCACGCGTCCGGGGCTTTCATCTGACCCAGAAACCTTTGCCAAGAACCGT
GAACTCGAAGTCATCCACTGCAGATGGGCCATGTTGGGAGCTCTTGGATG
CGTCTTCCCGGAGCTCTTGGCCCGCAACGGAGTCAAGTTCGGTGAGGCCG
TGTGGTTCAAGGCGGGGGCCCATATCTTCAGCGAGGGCGGGCTTGACTAC
TTGGGGAACCCAAGCCTGATCCACGCTCAGAGCATCTTGGCCATCTGGGC
TTGCCAGGTGGTCTTGATGGGAGCCGTTGAGGGTTACAGAATTGCTGGAG
GGCCGCTCGGTGAAGTGACTGACCCATTGTACCCAGGTGGCAGCTTTGAT
CCATTGGGTTTGGCTGATGACCCGGAGGCTTTTGCTGAGCTCAAGGTTAA
GGAAATCAAGAATGGAAGGTTGGCTATGTTCTCCATGTTTGGTTTCTTCG
TTCAGGCCATTGTCACCGGCAAGGGACCGTTAGAGAACTTGGCCGACCAC
TTGGCTGACCCTGTCAATAACAATGCCTGGGCCTACGCCACCAACTTTGT
CCCCGGAAAGTGAGCTTCGGTTGATAAGAGTTTTTCTCTTTTCGGTTTCT
TGGATATCATGTAAATCTGTTGTGAGCTCATGGAAGCNNTTATTTGAGTT
GTGATTATTTATAAAATGCTTCNNATTGATCTAAAAAAAAAAAAAAAAAA
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