CV719119

Overview
NameCV719119
Unique NameCV719119
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length522
Libraries
Library NameType
Parent Washington Navel Orange Callus cDNA Library UCRCS08-1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
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BLAST of CV719119 vs. ExPASy Swiss-Prot
Match: NO93_SOYBN (Early nodulin-93 OS=Glycine max PE=2 SV=1)

HSP 1 Score: 135.576 bits (340), Expect = 1.369e-31
Identity = 77/107 (71.96%), Postives = 77/107 (71.96%), Query Frame = -3 
Query:  137 MAKNVAQSPLERTSLASLDHKLAMAKRCSHEXXXXXXXXXXXXXXXXXIPTLASVRMLPWARANLNHTAQALIISTVAGAAYFIVADKTVLATARKNSFQQASNMEA 457
            MAK    SPLER SLASLD KLA AKRCSHE                 IPTLASVRMLPWARANLNHTAQALIIST   AAYFIVADKTVLATARKNSF Q SN EA
Sbjct:    1 MAKG--NSPLERPSLASLDQKLAFAKRCSHEGVLAGAKAAVVASVASAIPTLASVRMLPWARANLNHTAQALIISTATAAAYFIVADKTVLATARKNSFNQPSNSEA 105
The following BLAST results are available for this feature:
BLAST of CV719119 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 1
Match NameE-valueIdentityDescription
NO93_SOYBN1.369e-3171.96Early nodulin-93 OS=Glycine max PE=2 SV=1[more]
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Properties
Property NameValue
Genbank descriptionUCRCS08_0011H21_f Parent Washington Navel Orange Callus cDNA Library UCRCS08-1 Citrus sinensis cDNA clone CS_AEa0011H21, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CV719119 ID=CV719119; Name=CV719119; organism=Citrus sinensis; type=EST; length=522bp
TTTTTTTGGATGGAAACCATCTTTTATTTATACGTAGATAACGGATATAC
ATCCTAAGTTGGTTATTGGAATATGATGATAACGCAGTACAACATAAGCG
AATCATATAATCATTTAATTAGCAATTCAAAACCTATGCTTCCATGTTAG
AGGCTTGCTGGAAGGAGTTTTTTCGTGCTGTGGCCAGAACAGTCTTGTCA
GCCACAATGAAATATGCCGCTCCAGCCACTGTTGAGATAATAAGAGCTTG
AGCAGTGTGATTGAGGTTGGCTCTAGCCCAAGGAAGCATCCTCACACTCG
CGAGCGTTGGAATGGCAGTAGCAACCGTAGCAACAACAGCTGCCTTAGCT
CCCGCAATTACACCCTCATGAGAGCAACGCTTAGCCATAGCCAGTTTATG
GTCAAGTGAAGCCAAGCTGGTCCTTTCAAGAGGAGACTGAGCTACATTCT
TTGCCATTGTTTGAGAAAGTTAAAATGGAGAATATGTTAATAATGAGCTG
AGGAAATTGACGAGGCTGTCCT
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