CV719025

Overview
NameCV719025
Unique NameCV719025
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length818
Libraries
Library NameType
Parent Washington Navel Orange Callus cDNA Library UCRCS08-1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CV719025 vs. ExPASy Swiss-Prot
Match: PGKY_TOBAC (Phosphoglycerate kinase, cytosolic OS=Nicotiana tabacum PE=2 SV=1)

HSP 1 Score: 379.407 bits (973), Expect = 1.303e-104
Identity = 194/208 (93.27%), Postives = 203/208 (97.60%), Query Frame = -1
Query:  195 FAAIVGDSKVSTKIGVIESLLEKVDILLLGGGMIFTFYKAQGHSVGSSLVEEDKLDLATSLMEKAKSKGVSLLLPTDVVIADKFAADANSKVVPATAIPDGWMGLDVGPDAIKSFSEALDTTKTIIWNGPMGVFEFDKFAAGTEAIAKKLAELSGKGVTTIIGGGDSVAAVEKVGLADKMSHISTGGGASLELLEGKTLPGVLALDDA 818
            FAAIVG SKVS+KIGVIESLLEKVD+LLLGGGMIFTFYKAQG++VGSSLVEEDKLDLATSLMEKAK+KGVSLLLPTDVVIADKFAADANSKVVPA+ IPDGWMGLD+GPDAIKSF  ALDTTKT+IWNGPMGVFEFDKFAAGTEAIAKKLAELSGKGVTTIIGGGDSVAAVEKVGLA+KMSHISTGGGASLELLEGK LPGVLALDDA
Sbjct:  194 FAAIVGGSKVSSKIGVIESLLEKVDVLLLGGGMIFTFYKAQGYAVGSSLVEEDKLDLATSLMEKAKAKGVSLLLPTDVVIADKFAADANSKVVPASEIPDGWMGLDIGPDAIKSFGSALDTTKTVIWNGPMGVFEFDKFAAGTEAIAKKLAELSGKGVTTIIGGGDSVAAVEKVGLAEKMSHISTGGGASLELLEGKPLPGVLALDDA 401          
BLAST of CV719025 vs. ExPASy Swiss-Prot
Match: PGKH_TOBAC (Phosphoglycerate kinase, chloroplastic OS=Nicotiana tabacum PE=2 SV=1)

HSP 1 Score: 361.688 bits (927), Expect = 2.811e-99
Identity = 182/208 (87.50%), Postives = 200/208 (96.15%), Query Frame = -1
Query:  195 FAAIVGDSKVSTKIGVIESLLEKVDILLLGGGMIFTFYKAQGHSVGSSLVEEDKLDLATSLMEKAKSKGVSLLLPTDVVIADKFAADANSKVVPATAIPDGWMGLDVGPDAIKSFSEALDTTKTIIWNGPMGVFEFDKFAAGTEAIAKKLAELSGKGVTTIIGGGDSVAAVEKVGLADKMSHISTGGGASLELLEGKTLPGVLALDDA 818
            FAAIVG SKVS+KIGVIESLLEK DILLLGGGMIFTFYKAQG SVGSSLVEEDKL+LATSL+EKAK+KGVSLLLP+DVVIADKFA DANSK+VPA+AIPDGWMGLD+GPD++K+F++ALDTTKT+IWNGPMGVFEFDKFA GTEAIAKKLA+LSGKGVTTIIGGGDSVAAVEKVG+A  MSHISTGGGASLELLEGK LPGV+ALD+A
Sbjct:  268 FAAIVGGSKVSSKIGVIESLLEKCDILLLGGGMIFTFYKAQGLSVGSSLVEEDKLELATSLLEKAKAKGVSLLLPSDVVIADKFAPDANSKIVPASAIPDGWMGLDIGPDSVKTFNDALDTTKTVIWNGPMGVFEFDKFAVGTEAIAKKLADLSGKGVTTIIGGGDSVAAVEKVGVASVMSHISTGGGASLELLEGKVLPGVIALDEA 475          
BLAST of CV719025 vs. ExPASy Swiss-Prot
Match: PGKY_WHEAT (Phosphoglycerate kinase, cytosolic OS=Triticum aestivum PE=2 SV=1)

HSP 1 Score: 361.303 bits (926), Expect = 3.671e-99
Identity = 183/208 (87.98%), Postives = 199/208 (95.67%), Query Frame = -1
Query:  195 FAAIVGDSKVSTKIGVIESLLEKVDILLLGGGMIFTFYKAQGHSVGSSLVEEDKLDLATSLMEKAKSKGVSLLLPTDVVIADKFAADANSKVVPATAIPDGWMGLDVGPDAIKSFSEALDTTKTIIWNGPMGVFEFDKFAAGTEAIAKKLAELSGKGVTTIIGGGDSVAAVEKVGLADKMSHISTGGGASLELLEGKTLPGVLALDDA 818
            FAAIVG SKVS+KIGVIESLL KVDIL+LGGGMIFTFYKAQG +VG SLVEEDKL+LATSL+E AKSKGV LLLPTDVV+ADKFAADA SK+VPATAIPDGWMGLDVGPD+IK+F+EALDTTKT+IWNGPMGVFEF+KFAAGT+AIAK+LAEL+GKGVTTIIGGGDSVAAVEK GLADKMSHISTGGGASLELLEGK LPGVLALD+A
Sbjct:  194 FAAIVGGSKVSSKIGVIESLLAKVDILILGGGMIFTFYKAQGLAVGKSLVEEDKLELATSLIETAKSKGVKLLLPTDVVVADKFAADAESKIVPATAIPDGWMGLDVGPDSIKTFAEALDTTKTVIWNGPMGVFEFEKFAAGTDAIAKQLAELTGKGVTTIIGGGDSVAAVEKAGLADKMSHISTGGGASLELLEGKPLPGVLALDEA 401          
BLAST of CV719025 vs. ExPASy Swiss-Prot
Match: PGKH_SPIOL (Phosphoglycerate kinase, chloroplastic (Fragment) OS=Spinacia oleracea PE=2 SV=2)

HSP 1 Score: 355.525 bits (911), Expect = 2.015e-97
Identity = 181/208 (87.02%), Postives = 197/208 (94.71%), Query Frame = -1
Query:  195 FAAIVGDSKVSTKIGVIESLLEKVDILLLGGGMIFTFYKAQGHSVGSSLVEEDKLDLATSLMEKAKSKGVSLLLPTDVVIADKFAADANSKVVPATAIPDGWMGLDVGPDAIKSFSEALDTTKTIIWNGPMGVFEFDKFAAGTEAIAKKLAELSGKGVTTIIGGGDSVAAVEKVGLADKMSHISTGGGASLELLEGKTLPGVLALDDA 818
            FAAIVG SKVS+KIGVIESLLEK DILLLGGGMIFTFYKAQG SVGSSLVEEDKLDLATSL+ KAK KGVSLLLPTDVVIADKFAADA+SK+VPA+ IPDGWMGLD+GPD+IK+FSEALDTT+T+IWNGPMGVFEF+KFAAGTEAIAKKL E+S KG TTIIGGGDSVAAVEKVG+A+ MSHISTGGGASLELLEGK LPGVLAL++A
Sbjct:  221 FAAIVGGSKVSSKIGVIESLLEKCDILLLGGGMIFTFYKAQGMSVGSSLVEEDKLDLATSLLAKAKEKGVSLLLPTDVVIADKFAADADSKIVPASGIPDGWMGLDIGPDSIKTFSEALDTTQTVIWNGPMGVFEFEKFAAGTEAIAKKLEEISKKGATTIIGGGDSVAAVEKVGVAEAMSHISTGGGASLELLEGKQLPGVLALNEA 428          
BLAST of CV719025 vs. ExPASy Swiss-Prot
Match: PGKH_WHEAT (Phosphoglycerate kinase, chloroplastic OS=Triticum aestivum PE=2 SV=1)

HSP 1 Score: 352.058 bits (902), Expect = 2.227e-96
Identity = 178/207 (85.99%), Postives = 197/207 (95.17%), Query Frame = -1
Query:  198 FAAIVGDSKVSTKIGVIESLLEKVDILLLGGGMIFTFYKAQGHSVGSSLVEEDKLDLATSLMEKAKSKGVSLLLPTDVVIADKFAADANSKVVPATAIPDGWMGLDVGPDAIKSFSEALDTTKTIIWNGPMGVFEFDKFAAGTEAIAKKLAELSGKGVTTIIGGGDSVAAVEKVGLADKMSHISTGGGASLELLEGKTLPGVLALDD 818
            FAAIVG SKVS+KIGVIESLLEK DILLLGGGMIFTFYKAQG SVGSSLVEEDKL+LATSL+ KAK+KGVSLLLP+DV+IADKFA DANS+ VPA+AIPDGWMGLD+GPD++K+F++ALDTT+TIIWNGPMGVFEFDKFA GTE+IAKKLAELS KGVTTIIGGGDSVAAVEKVG+AD MSHISTGGGASLELLEGK LPGV+ALD+
Sbjct:  265 FAAIVGGSKVSSKIGVIESLLEKCDILLLGGGMIFTFYKAQGLSVGSSLVEEDKLELATSLLAKAKAKGVSLLLPSDVIIADKFAPDANSQTVPASAIPDGWMGLDIGPDSVKTFNDALDTTQTIIWNGPMGVFEFDKFAVGTESIAKKLAELSKKGVTTIIGGGDSVAAVEKVGVADVMSHISTGGGASLELLEGKELPGVVALDE 471          
BLAST of CV719025 vs. ExPASy Swiss-Prot
Match: PGKH_ARATH (Phosphoglycerate kinase, chloroplastic OS=Arabidopsis thaliana GN=At1g56190 PE=1 SV=2)

HSP 1 Score: 347.821 bits (891), Expect = 4.201e-95
Identity = 177/208 (85.10%), Postives = 194/208 (93.27%), Query Frame = -1
Query:  195 FAAIVGDSKVSTKIGVIESLLEKVDILLLGGGMIFTFYKAQGHSVGSSLVEEDKLDLATSLMEKAKSKGVSLLLPTDVVIADKFAADANSKVVPATAIPDGWMGLDVGPDAIKSFSEALDTTKTIIWNGPMGVFEFDKFAAGTEAIAKKLAELSGKGVTTIIGGGDSVAAVEKVGLADKMSHISTGGGASLELLEGKTLPGVLALDDA 818
            FAAIVG SKVS+KIGVIESLLEK DILLLGGGMIFTFYKAQG SVGSSLVEEDKL+LAT L+ KAK+KGVSLLLPTDVV+ADKFA DANSK+VPA+ I DGWMGLD+GPD+IK+F+EALDTT+T+IWNGPMGVFE +KFAAGTEAIA KLAELS KGVTTIIGGGDSVAAVEKVG+A  MSHISTGGGASLELLEGK LPGV+ALD+A
Sbjct:  266 FAAIVGGSKVSSKIGVIESLLEKCDILLLGGGMIFTFYKAQGLSVGSSLVEEDKLELATELLAKAKAKGVSLLLPTDVVVADKFAPDANSKIVPASGIEDGWMGLDIGPDSIKTFNEALDTTQTVIWNGPMGVFEMEKFAAGTEAIANKLAELSEKGVTTIIGGGDSVAAVEKVGVAGVMSHISTGGGASLELLEGKVLPGVIALDEA 473          
BLAST of CV719025 vs. ExPASy Swiss-Prot
Match: PGK_CYAP4 (Phosphoglycerate kinase OS=Cyanothece sp. (strain PCC 7425 / ATCC 29141) GN=pgk PE=3 SV=1)

HSP 1 Score: 320.857 bits (821), Expect = 5.499e-87
Identity = 161/207 (77.78%), Postives = 184/207 (88.89%), Query Frame = -1
Query:  195 AAIVGDSKVSTKIGVIESLLEKVDILLLGGGMIFTFYKAQGHSVGSSLVEEDKLDLATSLMEKAKSKGVSLLLPTDVVIADKFAADANSKVVPATAIPDGWMGLDVGPDAIKSFSEALDTTKTIIWNGPMGVFEFDKFAAGTEAIAKKLAELSGKGVTTIIGGGDSVAAVEKVGLADKMSHISTGGGASLELLEGKTLPGVLALDDA 815
            AAIVG SKVS+KIGVIE+LLEKVD LLLGGGMIFTFYKA+G +VG SLVEEDKL+LA +L  KAK +GV+LLLPTDVV+AD FAADAN++ V   +IPDGWMGLD+GPDA+K+F EAL   KT+IWNGPMGVFEFDKFA GTEAIA  LA L+GKG +TIIGGGDSVAAVEKVG+A++MSHISTGGGASLELLEGK LPG++ALDDA
Sbjct:  200 AAIVGGSKVSSKIGVIETLLEKVDKLLLGGGMIFTFYKARGLNVGKSLVEEDKLELARTLEAKAKERGVALLLPTDVVVADAFAADANAQTVSVESIPDGWMGLDIGPDAVKTFQEALSDCKTVIWNGPMGVFEFDKFAVGTEAIAHSLAGLTGKGASTIIGGGDSVAAVEKVGVAEQMSHISTGGGASLELLEGKELPGIVALDDA 406          
BLAST of CV719025 vs. ExPASy Swiss-Prot
Match: PGK_NOSP7 (Phosphoglycerate kinase OS=Nostoc punctiforme (strain ATCC 29133 / PCC 73102) GN=pgk PE=3 SV=1)

HSP 1 Score: 317.39 bits (812), Expect = 6.080e-86
Identity = 161/207 (77.78%), Postives = 179/207 (86.47%), Query Frame = -1
Query:  195 AAIVGDSKVSTKIGVIESLLEKVDILLLGGGMIFTFYKAQGHSVGSSLVEEDKLDLATSLMEKAKSKGVSLLLPTDVVIADKFAADANSKVVPATAIPDGWMGLDVGPDAIKSFSEALDTTKTIIWNGPMGVFEFDKFAAGTEAIAKKLAELSGKGVTTIIGGGDSVAAVEKVGLADKMSHISTGGGASLELLEGKTLPGVLALDDA 815
            AAI+G SKVS+KIGVIE+LLEK D L++GGGMIFTFYKA+G SVG SLVEEDKL+LA SL  KAK +GV+LLLPTDVV+AD FA DANS+ V    IPDGWMGLD+GPD++K F EAL  TKT+IWNGPMGVFEFDKFAAGTEAIA  LAE+   G TTIIGGGDSVAAVEKVGLAD+MSHISTGGGASLELLEGK LPG+ ALDDA
Sbjct:  194 AAIIGGSKVSSKIGVIETLLEKCDKLIIGGGMIFTFYKARGLSVGKSLVEEDKLELAKSLEAKAKERGVALLLPTDVVLADNFAPDANSQTVSIENIPDGWMGLDIGPDSVKFFQEALADTKTVIWNGPMGVFEFDKFAAGTEAIAHTLAEIGKTGTTTIIGGGDSVAAVEKVGLADQMSHISTGGGASLELLEGKVLPGIAALDDA 400          
BLAST of CV719025 vs. ExPASy Swiss-Prot
Match: PGK_SYNS3 (Phosphoglycerate kinase OS=Synechococcus sp. (strain CC9311) GN=pgk PE=3 SV=1)

HSP 1 Score: 315.849 bits (808), Expect = 1.769e-85
Identity = 161/207 (77.78%), Postives = 178/207 (85.99%), Query Frame = -1
Query:  195 AAIVGDSKVSTKIGVIESLLEKVDILLLGGGMIFTFYKAQGHSVGSSLVEEDKLDLATSLMEKAKSKGVSLLLPTDVVIADKFAADANSKVVPATAIPDGWMGLDVGPDAIKSFSEALDTTKTIIWNGPMGVFEFDKFAAGTEAIAKKLAELSGKGVTTIIGGGDSVAAVEKVGLADKMSHISTGGGASLELLEGKTLPGVLALDDA 815
            AAIVG SKVS+KIGV+E+L++K D +L+GGGMIFTFYKA+G +VG SLVEEDKL+LA  L  KAK+KGV LLLPTDV++AD FA DANS+V   TAIPDGWMGLD+GPDAIK F  AL   KT+IWNGPMGVFEFDKFAAGT AIA  LAELSGKG  TIIGGGDSVAAVEK GLA+KMSHISTGGGASLELLEGK LPGV ALDDA
Sbjct:  195 AAIVGGSKVSSKIGVLEALIDKCDKVLIGGGMIFTFYKARGLAVGKSLVEEDKLELAKELEAKAKAKGVELLLPTDVLLADNFAPDANSQVADVTAIPDGWMGLDIGPDAIKVFQAALADCKTVIWNGPMGVFEFDKFAAGTNAIATTLAELSGKGCCTIIGGGDSVAAVEKAGLAEKMSHISTGGGASLELLEGKVLPGVAALDDA 401          
BLAST of CV719025 vs. ExPASy Swiss-Prot
Match: PGK_SYNE7 (Phosphoglycerate kinase OS=Synechococcus elongatus (strain PCC 7942) GN=pgk PE=3 SV=1)

HSP 1 Score: 315.849 bits (808), Expect = 1.769e-85
Identity = 160/207 (77.29%), Postives = 179/207 (86.47%), Query Frame = -1
Query:  195 AAIVGDSKVSTKIGVIESLLEKVDILLLGGGMIFTFYKAQGHSVGSSLVEEDKLDLATSLMEKAKSKGVSLLLPTDVVIADKFAADANSKVVPATAIPDGWMGLDVGPDAIKSFSEALDTTKTIIWNGPMGVFEFDKFAAGTEAIAKKLAELSGKGVTTIIGGGDSVAAVEKVGLADKMSHISTGGGASLELLEGKTLPGVLALDDA 815
            AAIVG SKVS+KIGVIE+LL+K D LL+GGGMIFTFYKAQG SVG SLVEEDKLDLA SLM KA+ KGV LLLP DVV+ADKFA DAN+K V   AIPDGWMGLD+GP+++K F EAL   +++IWNGPMGVFEFD+FA GTEAIA+ LA L+ KG TTIIGGGDSVAAVEKVG+A +MSHISTGGGASLELLEGK LPGV ALDDA
Sbjct:  195 AAIVGGSKVSSKIGVIETLLDKCDKLLIGGGMIFTFYKAQGLSVGGSLVEEDKLDLARSLMAKAQEKGVQLLLPVDVVVADKFAPDANAKTVAIDAIPDGWMGLDIGPESVKQFEEALADCRSVIWNGPMGVFEFDQFAVGTEAIARSLAGLTRKGATTIIGGGDSVAAVEKVGVASEMSHISTGGGASLELLEGKVLPGVAALDDA 401          
The following BLAST results are available for this feature:
BLAST of CV719025 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 500
Match NameE-valueIdentityDescription
PGKY_TOBAC1.303e-10493.27Phosphoglycerate kinase, cytosolic OS=Nicotiana ta... [more]
PGKH_TOBAC2.811e-9987.50Phosphoglycerate kinase, chloroplastic OS=Nicotian... [more]
PGKY_WHEAT3.671e-9987.98Phosphoglycerate kinase, cytosolic OS=Triticum aes... [more]
PGKH_SPIOL2.015e-9787.02Phosphoglycerate kinase, chloroplastic (Fragment) ... [more]
PGKH_WHEAT2.227e-9685.99Phosphoglycerate kinase, chloroplastic OS=Triticum... [more]
PGKH_ARATH4.201e-9585.10Phosphoglycerate kinase, chloroplastic OS=Arabidop... [more]
PGK_CYAP45.499e-8777.78Phosphoglycerate kinase OS=Cyanothece sp. (strain ... [more]
PGK_NOSP76.080e-8677.78Phosphoglycerate kinase OS=Nostoc punctiforme (str... [more]
PGK_SYNS31.769e-8577.78Phosphoglycerate kinase OS=Synechococcus sp. (stra... [more]
PGK_SYNE71.769e-8577.29Phosphoglycerate kinase OS=Synechococcus elongatus... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS08_0011F18_f Parent Washington Navel Orange Callus cDNA Library UCRCS08-1 Citrus sinensis cDNA clone CS_AEa0011F18, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CV719025 ID=CV719025; Name=CV719025; organism=Citrus sinensis; type=EST; length=818bp
TTTTTTTTTTTTTTTCCAGAAAATGCATCACCATTGATGCCTGTGAGAAA
GAATTTATTTTTACTCTTACAGCATCTACAAAACCAACTCTAATGATAAA
GTTTAACTTTTATCCACTCTGGGCTGACAACCAGCCACACATACAACTCT
GGAAATGGCACAATTAAAAAAGGAAAGTCCAGGAACTGGGTTTAAGCATC
ATCAAGAGCAAGCACACCAGGGAGTGTTTTGCCCTCAAGGAGCTCTAAGC
TGGCTCCACCTCCAGTGGAGATATGGCTCATCTTGTCAGCCAGACCAACC
TTCTCTACGGCTGCAACTGAGTCACCTCCTCCAATGATTGTGGTCACTCC
CTTCCCGCTGAGCTCCGCAAGCTTCTTGGCAATTGCCTCAGTGCCAGCAG
CAAATTTATCAAATTCAAACACACCCATAGGTCCATTCCAGATGATGGTT
TTAGTAGTATCCAAAGCTTCACTGAATGACTTGATGGCATCAGGTCCAAC
ATCCAAGCCCATCCAACCATCTGGAATTGCCGTTGCTGGCACCACCTTGC
TGTTGGCATCAGCAGCAAACTTGTCAGCAATAACAACATCAGTAGGGAGC
AGAAGAGACACCCCTTTAGATTTGGCCTTCTCCATAAGTGACGTAGCGAG
ATCAAGCTTGTCTTCCTCAACAAGGGATGAACCAACAGAGTGTCCTTGGG
CCTTGTAAAAGGTAAAGATCATTCCTCCACCGAGCAATAGAATGTCAACC
TTCTCCAAAAGTGATTCAATAACACCGATCTTAGTTGACACCTTTGAATC
ACCAACAATGGCAGCAAA
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