EY665073

Overview
NameEY665073
Unique NameEY665073
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length819
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of EY665073 vs. ExPASy Swiss-Prot
Match: PSC13_MAIZE (Pollen-specific protein C13 OS=Zea mays GN=MGS1 PE=2 SV=1)

HSP 1 Score: 120.939 bits (302), Expect = 8.352e-27
Identity = 60/141 (42.55%), Postives = 88/141 (62.41%), Query Frame = 3
Query:  138 SADRPNPKHGXXEGRFFCDTCQAGWETPATTYIAGAKVKVECKDRKSMQVVYSREGKTDSTGTYKILVSEDHQDQLCDAVLVSSPQNDCKTVAPGRERSRVILTSYNGISSETRYANSMGFMKAEPMSGCAEVLMLYQEED 560
            +AD PN      +GR +CDTC+AG+ T  T YIAGAKV++ECK   + ++  + +G TD+TGTY I + + H++ +C  VLV+SP+ DC  V   R+R+ V+LT   GIS   R AN +G+ K  P+  CA +L     +D
Sbjct:   26 AADDPNLPDYVIQGRVYCDTCRAGFVTNVTEYIAGAKVRLECKHFGTGKLERAIDGVTDATGTYTIELKDSHEEDICQVVLVASPRKDCDEVQALRDRAGVLLTRNVGISDSLRPANPLGYFKDVPLPVCAALLKQLDSDD 166          
BLAST of EY665073 vs. ExPASy Swiss-Prot
Match: OLEE1_BETVE (Olee1-like protein OS=Betula verrucosa PE=2 SV=1)

HSP 1 Score: 112.079 bits (279), Expect = 3.879e-24
Identity = 50/125 (40.00%), Postives = 81/125 (64.80%), Query Frame = 3
Query:  174 EGRFFCDTCQAGWETPATTYIAGAKVKVECKDRKSMQVVYSREGKTDSTGTYKILVSEDHQDQLCDAVLVSSPQNDCKTVAPG---RERSRVILTSYNGISSETRYANSMGFMKAEPMSGCAEVL 539
            EG+ +CD C+  + T  +TY+ GAKV +EC++R+   ++YS + +TD +GTY+I V  DH++++C+  L  S   DC  V+     ++ +R+ LT  NGIS+  R AN +GFMK +P+  CA+ L
Sbjct:   30 EGKVYCDNCRTQFVTKLSTYMKGAKVSLECRNREGGTLIYSSDSETDKSGTYRIPVDGDHEEEICEIALKKSSDPDCSEVSKDPFLKKSARISLTKNNGISTPVRLANPLGFMKKKPLPECAKAL 154          
BLAST of EY665073 vs. ExPASy Swiss-Prot
Match: LAT52_SOLLC (Anther-specific protein LAT52 OS=Solanum lycopersicum GN=LAT52 PE=2 SV=1)

HSP 1 Score: 108.227 bits (269), Expect = 5.602e-23
Identity = 48/122 (39.34%), Postives = 76/122 (62.30%), Query Frame = 3
Query:  174 EGRFFCDTCQAGWETPATTYIAGAKVKVECKDRKSMQVVYSREGKTDSTGTYKILVSEDHQDQLCDAVLVSSPQNDCKTVAPGRERSRVILTSYNGISSETRYANSMGFMKAEPMSGCAEVL 539
            EG+ +CDTC+  +ET  +  + GA VK++C++  +    +S EG TD  G YK+ V+ DH++ +C+  +V SP+ DCK    G E++R+  +   GI +  R+AN + FMKAE + GC E L
Sbjct:   30 EGKVYCDTCRVQFETKLSENLEGATVKLQCRNISTEAETFSVEGVTDKDGKYKLTVNGDHENDICEVTVVKSPREDCKESVSGYEKARIECSDNVGIHNAVRFANPLFFMKAESVQGCKEAL 151          
BLAST of EY665073 vs. ExPASy Swiss-Prot
Match: PHLB_PHLPR (Pollen allergen Phl p 11 OS=Phleum pratense PE=1 SV=1)

HSP 1 Score: 107.842 bits (268), Expect = 7.316e-23
Identity = 51/129 (39.53%), Postives = 73/129 (56.59%), Query Frame = 3
Query:  177 GRFFCDTCQAGWETPATTYIAGAKVKVECKDRKSMQVVYSREGKTDSTGTYKILVSEDHQDQLCDAVLVSSPQNDCKTVAPGRERSRVILTSYNGISSE-TRYANSMGFMKAEPMSGCAEVLMLYQEED 560
            GR +CD C+AG+ET  +  + GA V V+C+     +     E  TD  G YKI + +DHQ+++C+ VL  SP   C  +   R+R+RV LTS NGI  +  RYAN + F + EP+  C  +L  Y   D
Sbjct:   10 GRVYCDPCRAGFETNVSHNVQGATVAVDCRPFNGGESKLKAEATTDGLGWYKIEIDQDHQEEICEVVLAKSPDTTCSEIEEFRDRARVPLTSNNGIKQQGIRYANPIAFFRKEPLKECGGILQAYDLRD 138          
BLAST of EY665073 vs. ExPASy Swiss-Prot
Match: LOLB_LOLPR (Major pollen allergen Lol p 11 OS=Lolium perenne PE=1 SV=1)

HSP 1 Score: 103.99 bits (258), Expect = 1.056e-21
Identity = 49/125 (39.20%), Postives = 71/125 (56.80%), Query Frame = 3
Query:  177 GRFFCDTCQAGWETPATTYIAGAKVKVECKDRKSMQVVYSREGKTDSTGTYKILVSEDHQDQLCDAVLVSSPQNDCKTVAPGRERSRVILTSYNGISSE-TRYANSMGFMKAEPMSGCAEVLMLY 548
            GR +CD C+AG+ET  +  + GA V V+C+     +     E  TD  G YKI + +DHQ+++C+ VL  SP   C  +   R+R+RV LTS  GI  +  RYAN + F + EP+  C  +L  Y
Sbjct:   10 GRVYCDPCRAGFETNVSHNVEGATVAVDCRPFDGGESKLKAEATTDKDGWYKIEIDQDHQEEICEVVLAKSPDKSCSEIEEFRDRARVPLTSNXGIKQQGIRYANPIAFFRKEPLKECGGILQAY 134          
BLAST of EY665073 vs. ExPASy Swiss-Prot
Match: CHE1_CHEAL (Pollen allergen Che a 1 OS=Chenopodium album PE=1 SV=1)

HSP 1 Score: 99.7525 bits (247), Expect = 1.992e-20
Identity = 49/129 (37.98%), Postives = 77/129 (59.69%), Query Frame = 3
Query:  162 HGXXEGRFFCDTCQAGWETPATTYIAGAKVKVECKDRKSMQVVYSREGKTDSTGTYKILVSEDHQDQLCDAVLVSSPQNDCKTVAP---GRERSRVILTSYNGISSETRYANSMGFMKAEPMSGCAEVL 539
            H   +G  +CDTC+  + T  +T + GA VK+EC++  +    +  E  TD  G Y I V+ D +D +C+  LV SP ++C  V+     ++ ++V LTS NG +S+ R AN++GFM+ EP+  C EVL
Sbjct:   29 HFKVQGMVYCDTCRIQFMTRISTIMEGATVKLECRNITAGTQTFKAEAVTDKVGQYSIPVNGDFEDDICEIELVKSPNSECSEVSHDVYAKQSAKVSLTSNNGEASDIRSANALGFMRKEPLKECPEVL 157          
BLAST of EY665073 vs. ExPASy Swiss-Prot
Match: ALL1_OLEEU (Major pollen allergen OS=Olea europaea PE=1 SV=2)

HSP 1 Score: 93.5893 bits (231), Expect = 1.428e-18
Identity = 40/121 (33.06%), Postives = 71/121 (58.68%), Query Frame = 3
Query:  174 EGRFFCDTCQAGWETPATTYIAGAKVKVECKDRKSMQVVYSREGKTDSTGTYKILVSEDHQDQLCDAVLVSSPQNDCKTVAPGRERSRVILTSYNGISSETRYANSMGFMKAEPMSGCAEV 536
            +G+ +CDTC+AG+ T  + +I GA ++++CKD+++  V ++  G T + G Y +LV  DH+++ C+  L+SS + DC  +         +    N ++  TR  N +GF K E +  CA+V
Sbjct:   14 QGQVYCDTCRAGFITELSEFIPGASLRLQCKDKENGDVTFTEVGYTRAEGLYSMLVERDHKNEFCEITLISSGRKDCNEIPTEGWAKPSLKFKLNTVNGTTRTVNPLGFFKKEALPKCAQV 134          
BLAST of EY665073 vs. ExPASy Swiss-Prot
Match: LIGV1_LIGVU (Major pollen allergen Lig v 1 OS=Ligustrum vulgare PE=1 SV=2)

HSP 1 Score: 86.2705 bits (212), Expect = 2.280e-16
Identity = 38/121 (31.40%), Postives = 70/121 (57.85%), Query Frame = 3
Query:  174 EGRFFCDTCQAGWETPATTYIAGAKVKVECKDRKSMQVVYSREGKTDSTGTYKILVSEDHQDQLCDAVLVSSPQNDCKTVAPGRERSRVILTSYNGISSETRYANSMGFMKAEPMSGCAEV 536
            +G+ +CDTC+A + T  + +I GA V+++CKD ++ +V ++  G T + G Y +L+  DH+++ C+  L+SS + DC  +         +    N ++  TR  N +GF+K E +  C +V
Sbjct:   14 QGQVYCDTCRARFITELSEFIPGAGVRLQCKDGENGKVTFTEVGYTKAEGLYNMLIERDHKNEFCEITLISSSRKDCDEIPTEGWVKPSLKFVLNTVNGTTRTINPLGFLKKEVLPKCPQV 134          
The following BLAST results are available for this feature:
BLAST of EY665073 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 8
Match NameE-valueIdentityDescription
PSC13_MAIZE8.352e-2742.55Pollen-specific protein C13 OS=Zea mays GN=MGS1 PE... [more]
OLEE1_BETVE3.879e-2440.00Olee1-like protein OS=Betula verrucosa PE=2 SV=1[more]
LAT52_SOLLC5.602e-2339.34Anther-specific protein LAT52 OS=Solanum lycopersi... [more]
PHLB_PHLPR7.316e-2339.53Pollen allergen Phl p 11 OS=Phleum pratense PE=1 S... [more]
LOLB_LOLPR1.056e-2139.20Major pollen allergen Lol p 11 OS=Lolium perenne P... [more]
CHE1_CHEAL1.992e-2037.98Pollen allergen Che a 1 OS=Chenopodium album PE=1 ... [more]
ALL1_OLEEU1.428e-1833.06Major pollen allergen OS=Olea europaea PE=1 SV=2[more]
LIGV1_LIGVU2.280e-1631.40Major pollen allergen Lig v 1 OS=Ligustrum vulgare... [more]
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Properties
Property NameValue
Genbank descriptionCS00-C1-101-073-F11-CT.F Sweet orange leaf, infected with Xylella fastidiosa (stage 1 of 2) Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY665073 ID=EY665073; Name=EY665073; organism=Citrus sinensis; type=EST; length=819bp
AATCAAAGCCGGACCCAGCGNCCGAGAAGNATTTANGNGCGCACAAGANA
CAAGAAAGCCCAGCGNCCNNCANCACCCAAAAGACAAGGGCGAGCAAANG
GNGGCNGAGCGCNCNNAGCGGGCGGCCGGCACAGGNGAGCGCGGACCGGC
CCAACCCNAAACACGGCNCGGNAGAAGGACGCTTTTTTTGTGACACCTGC
CAAGCCGGCTGGGAGACCCCCGCCACCACCTACATCGCCGGTGCCAAGGT
GAAGGTTGAATGCAAAGACAGGAAGTCAATGCAAGTAGTATATAGCAGGG
AAGGGAAAACAGACTCAACTGGAACATATAAGATCCTCGTTTCAGAAGAC
CATCAGGATCAACTTTGCGATGCTGTCCTCGTTAGCAGCCCCCAGAATGA
CTGCAAAACAGTTGCCCCAGGGCGTGAGCGTTCCCGTGTGATCTTGACCA
GTTACAACGGCATTTCTTCTGAAACCCGATATGCCAATTCAATGGGCTTC
ATGAAGGCAGAGCCCATGTCTGGCTGTGCTGAGGTTCTCATGCTATATCA
GGAGGAGGATGTGTAGAGAATGGTGTGGCATGGTTTTTTCTATCGCTTTC
CATGTGGTTAAGCTTTGGGTTGGCCCAGCTATCATACTGGCTCTTCTATT
AGTAGCGCCTGGATGGCTGGGCTGATTCTATGGTTAGAGAATTCTCAATT
CGCCGTTAAAGGACGGGGACCCCATTAATCCATTTATATGCCTGGGGCTT
CTAGCTTTGAGATGCGTTTTATCGCTAGTAATGCCTGATTTATTTTCACA
AAAAAAAAAAAACAAAGGG
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