CX300911
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CX300911 vs. ExPASy Swiss-Prot
Match: SUI1_SPOST (Protein translation factor SUI1 homolog OS=Sporobolus stapfianus PE=3 SV=1) HSP 1 Score: 83.9593 bits (206), Expect = 2.657e-16 Identity = 42/77 (54.55%), Postives = 54/77 (70.13%), Query Frame = 3 Query: 165 SSVDPFSEE--ADFGDSAKASNYIHIRIQQRNGRKSLTTIQGLDPATVPLKKLLKHFKRQFCCNGTIVNDEALGPVI 389 ++ DPFSE D G +A + +Y+H+RIQQRNGRKSLTT+QGL K+LK K++FCCNGT+V D LG VI Sbjct: 10 TAFDPFSEANAGDSGAAAGSKDYVHVRIQQRNGRKSLTTVQGL-KKEFSYNKILKDLKKEFCCNGTVVQDPELGQVI 85
BLAST of CX300911 vs. ExPASy Swiss-Prot
Match: SUI1_SCHPO (Protein translation factor sui1 OS=Schizosaccharomyces pombe GN=sui1 PE=2 SV=3) HSP 1 Score: 83.5741 bits (205), Expect = 3.470e-16 Identity = 43/76 (56.58%), Postives = 55/76 (72.37%), Query Frame = 3 Query: 162 FSSVDPFSEEADFGDSAKASNYIHIRIQQRNGRKSLTTIQGLDPATVPLKKLLKHFKRQFCCNGTIVNDEALGPVI 389 F++VDPF++ D D A+ N IHIRIQQRNGRK+LTT+QGL P K++L+ K+ F CNGTIV D+ LG VI Sbjct: 7 FNTVDPFADTGD--DDAQPLNNIHIRIQQRNGRKTLTTVQGL-PREFDQKRILRALKKDFACNGTIVKDDDLGEVI 79
BLAST of CX300911 vs. ExPASy Swiss-Prot
Match: SUI1_ORYSJ (Protein translation factor SUI1 homolog OS=Oryza sativa subsp. japonica GN=GOS2 PE=3 SV=1) HSP 1 Score: 82.8037 bits (203), Expect = 5.919e-16 Identity = 41/77 (53.25%), Postives = 54/77 (70.13%), Query Frame = 3 Query: 165 SSVDPFSEE--ADFGDSAKASNYIHIRIQQRNGRKSLTTIQGLDPATVPLKKLLKHFKRQFCCNGTIVNDEALGPVI 389 ++ DPF+E D G +A + +Y+H+RIQQRNGRKSLTT+QGL K+LK K++FCCNGT+V D LG VI Sbjct: 10 TAFDPFAEANAGDSGAAAGSKDYVHVRIQQRNGRKSLTTVQGL-KKEFSYNKILKDLKKEFCCNGTVVQDPELGQVI 85
BLAST of CX300911 vs. ExPASy Swiss-Prot
Match: SUI1_ORYSI (Protein translation factor SUI1 homolog OS=Oryza sativa subsp. indica GN=GOS2 PE=2 SV=1) HSP 1 Score: 82.8037 bits (203), Expect = 5.919e-16 Identity = 41/77 (53.25%), Postives = 54/77 (70.13%), Query Frame = 3 Query: 165 SSVDPFSEE--ADFGDSAKASNYIHIRIQQRNGRKSLTTIQGLDPATVPLKKLLKHFKRQFCCNGTIVNDEALGPVI 389 ++ DPF+E D G +A + +Y+H+RIQQRNGRKSLTT+QGL K+LK K++FCCNGT+V D LG VI Sbjct: 10 TAFDPFAEANAGDSGAAAGSKDYVHVRIQQRNGRKSLTTVQGL-KKEFSYNKILKDLKKEFCCNGTVVQDPELGQVI 85
BLAST of CX300911 vs. ExPASy Swiss-Prot
Match: SUI1_MAIZE (Protein translation factor SUI1 homolog OS=Zea mays GN=TIF PE=3 SV=1) HSP 1 Score: 82.8037 bits (203), Expect = 5.919e-16 Identity = 41/77 (53.25%), Postives = 54/77 (70.13%), Query Frame = 3 Query: 165 SSVDPFSEE--ADFGDSAKASNYIHIRIQQRNGRKSLTTIQGLDPATVPLKKLLKHFKRQFCCNGTIVNDEALGPVI 389 ++ DPF+E D G +A + +Y+H+RIQQRNGRKSLTT+QGL K+LK K++FCCNGT+V D LG VI Sbjct: 10 TAFDPFAEANAGDSGAAAGSKDYVHVRIQQRNGRKSLTTVQGL-KKEFSYSKILKDLKKEFCCNGTVVQDPELGQVI 85
BLAST of CX300911 vs. ExPASy Swiss-Prot
Match: SUI1_ASHGO (Protein translation factor SUI1 OS=Ashbya gossypii GN=SUI1A PE=3 SV=1) HSP 1 Score: 82.8037 bits (203), Expect = 5.919e-16 Identity = 40/81 (49.38%), Postives = 56/81 (69.14%), Query Frame = 3 Query: 147 VDFDPFSSVDPFSEEADFGDSAKASNYIHIRIQQRNGRKSLTTIQGLDPATVPLKKLLKHFKRQFCCNGTIVNDEALGPVI 389 + + S DPF++ D D A +SNYIHIRIQQRNGRK+LTT+QG+ P LK++LK ++ F CNG +V D+ +G +I Sbjct: 1 MSIENLKSFDPFADTGD--DEASSSNYIHIRIQQRNGRKTLTTVQGI-PEEYDLKRILKVLRKDFGCNGNMVKDDEMGEII 78
BLAST of CX300911 vs. ExPASy Swiss-Prot
Match: SUI1_YEAST (Eukaryotic translation initiation factor eIF-1 OS=Saccharomyces cerevisiae GN=SUI1 PE=1 SV=1) HSP 1 Score: 82.4185 bits (202), Expect = 7.730e-16 Identity = 41/81 (50.62%), Postives = 53/81 (65.43%), Query Frame = 3 Query: 147 VDFDPFSSVDPFSEEADFGDSAKASNYIHIRIQQRNGRKSLTTIQGLDPATVPLKKLLKHFKRQFCCNGTIVNDEALGPVI 389 + + S DPF++ D D SNYIHIRIQQRNGRK+LTT+QG+ P LK++LK K+ F CNG IV D +G +I Sbjct: 1 MSIENLKSFDPFADTGD--DETATSNYIHIRIQQRNGRKTLTTVQGV-PEEYDLKRILKVLKKDFACNGNIVKDPEMGEII 78
BLAST of CX300911 vs. ExPASy Swiss-Prot
Match: SUI1_PIMBR (Protein translation factor SUI1 homolog OS=Pimpinella brachycarpa PE=3 SV=1) HSP 1 Score: 81.2629 bits (199), Expect = 1.722e-15 Identity = 40/75 (53.33%), Postives = 50/75 (66.67%), Query Frame = 3 Query: 165 SSVDPFSEEADFGDSAKASNYIHIRIQQRNGRKSLTTIQGLDPATVPLKKLLKHFKRQFCCNGTIVNDEALGPVI 389 +S DPF+E + Y+HIRIQQRNGRKSLTT+QGL + K+LK K+ CCNGT+VND+ LG VI Sbjct: 10 TSFDPFAEAEITDATGSTKEYVHIRIQQRNGRKSLTTVQGL-KKELSYDKILKDLKKALCCNGTVVNDKELGKVI 83
BLAST of CX300911 vs. ExPASy Swiss-Prot
Match: SUI1_SALBA (Protein translation factor SUI1 homolog OS=Salix bakko PE=3 SV=1) HSP 1 Score: 80.4925 bits (197), Expect = 2.938e-15 Identity = 38/75 (50.67%), Postives = 50/75 (66.67%), Query Frame = 3 Query: 165 SSVDPFSEEADFGDSAKASNYIHIRIQQRNGRKSLTTIQGLDPATVPLKKLLKHFKRQFCCNGTIVNDEALGPVI 389 ++ DPF+E A +Y+H+R+QQRNGRKSLTT+QGL K+LK K++FCCNGT+V D LG VI Sbjct: 10 TAFDPFAEANAEDSGAGTKDYVHVRVQQRNGRKSLTTVQGL-KKDYSYNKILKDLKKEFCCNGTVVQDPELGQVI 83
BLAST of CX300911 vs. ExPASy Swiss-Prot
Match: SUI12_ARATH (Protein translation factor SUI1 homolog 2 OS=Arabidopsis thaliana GN=At1g54290 PE=2 SV=1) HSP 1 Score: 79.7221 bits (195), Expect = 5.011e-15 Identity = 38/75 (50.67%), Postives = 49/75 (65.33%), Query Frame = 3 Query: 165 SSVDPFSEEADFGDSAKASNYIHIRIQQRNGRKSLTTIQGLDPATVPLKKLLKHFKRQFCCNGTIVNDEALGPVI 389 ++ DPF++ A Y+HIR+QQRNGRKSLTT+QGL K+LK K++FCCNGT+V D LG VI Sbjct: 10 TAFDPFADANAEDSGAGTKEYVHIRVQQRNGRKSLTTVQGL-KKEYSYSKILKDLKKEFCCNGTVVQDSELGQVI 83 The following BLAST results are available for this feature:
BLAST of CX300911 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 22
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Sequences
The
following sequences are available for this feature:
EST sequence >CX300911 ID=CX300911; Name=CX300911; organism=Citrus sinensis; type=EST; length=391bpback to top |