CX300910

Overview
NameCX300910
Unique NameCX300910
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length390
Libraries
Library NameType
PhyRootSw1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CX300910 vs. ExPASy Swiss-Prot
Match: COAX_AZOSE (Type III pantothenate kinase OS=Azoarcus sp. (strain EbN1) GN=coaX PE=3 SV=1)

HSP 1 Score: 112.464 bits (280), Expect = 6.949e-25
Identity = 65/125 (52.00%), Postives = 81/125 (64.80%), Query Frame = -1
Query:   22 IDAGNTRIKFGCHDGRDWLLRDALPHVDLSAFRLPAACVP--QRVLIANVAGAEVAQALRTRLAVVAPGVPVEYLRAEALRCGLRNGYANPAQLGADRWAALVGAWRELGRACLVVSAGTATTVD 390
            IDAGNTRIK+G   G  W+   AL H +++A     A  P  +RV+  NVAGA++A A+   L  V  G   +++ A A RCG+RN Y NPAQLGADRW AL+GA      ACLVV+AGTATTVD
Sbjct:    5 IDAGNTRIKWGVIRGEAWIAEGALIHAEVAALGDIVAAHPGLRRVVGTNVAGADIAAAIAAALRGV--GSAPQWIHASAERCGVRNRYDNPAQLGADRWVALIGARALHRAACLVVNAGTATTVD 127          
BLAST of CX300910 vs. ExPASy Swiss-Prot
Match: COAX_NITEU (Type III pantothenate kinase OS=Nitrosomonas europaea GN=coaX PE=3 SV=1)

HSP 1 Score: 107.457 bits (267), Expect = 2.235e-23
Identity = 61/129 (47.29%), Postives = 79/129 (61.24%), Query Frame = -1
Query:   22 IDAGNTRIKFGCHDGRDWLLRDALPHVDLSAFR-----LPAACVPQRVLIANVAGAEVAQALRTRLAVVAPG-VPVEYLRAEALRCGLRNGYANPAQLGADRWAALVGAWRELGRACLVVSAGTATTVD 390
            +D+GNT IK+G HDGR WL        +    +     LPA   P  +LIANVAG + A  L+   A++AP  V +E+  A A +CG+ + Y+NPAQLG DRW AL+ AW  L +ACLVV  GTA TVD
Sbjct:   10 VDSGNTAIKWGLHDGRQWLAHGKTLQSERRMLKQNWTALPA---PASILIANVAGLQAADDLK---ALLAPWHVHLEWATASARQCGVISRYSNPAQLGCDRWVALIAAWHRLQQACLVVDVGTAMTVD 132          
BLAST of CX300910 vs. ExPASy Swiss-Prot
Match: COAX_DECAR (Type III pantothenate kinase OS=Dechloromonas aromatica (strain RCB) GN=coaX PE=3 SV=1)

HSP 1 Score: 107.457 bits (267), Expect = 2.235e-23
Identity = 59/125 (47.20%), Postives = 81/125 (64.80%), Query Frame = -1
Query:   22 IDAGNTRIKFGCHDGRDWLLRDALPHVDLSAF-RLPAAC-VPQRVLIANVAGAEVAQALRTRLAVVAPGVPVEYLRAEALRCGLRNGYANPAQLGADRWAALVGAWRELGRACLVVSAGTATTVD 390
            +D+GNTRIK+G HDG  WL + A+ H ++ A  RL A   +P++V++ANVAG E    +R +LA  AP      +R E  RCG+ N Y +P +LG DRW AL+GA   +  A +VV AGTATT+D
Sbjct:    5 LDSGNTRIKWGVHDGVKWLAQGAVAHAEVGALSRLVAEWPLPEKVMLANVAGVEAGSRIREQLAAWAP--VFHEVRPELRRCGVTNLYKSPERLGVDRWCALLGARSLVDSATVVVMAGTATTID 127          
BLAST of CX300910 vs. ExPASy Swiss-Prot
Match: COAX_NITMU (Type III pantothenate kinase OS=Nitrosospira multiformis (strain ATCC 25196 / NCIMB 11849) GN=coaX PE=3 SV=1)

HSP 1 Score: 103.605 bits (257), Expect = 3.228e-22
Identity = 58/125 (46.40%), Postives = 77/125 (61.60%), Query Frame = -1
Query:   22 IDAGNTRIKFGCHDGRDWLLRDALPHVDLSAFRLPAACV--PQRVLIANVAGAEVAQALRTRLAVVAPGVPVEYLRAEALRCGLRNGYANPAQLGADRWAALVGAWRELGRACLVVSAGTATTVD 390
            +D+GNTR+K+G HDGR+WL++      D          +  P RV+I+NVA A V  +L   LA        +++ A   +CG+RN Y+NPAQLG+DRWAALV AW    + CLVV AGTA TVD
Sbjct:    8 VDSGNTRVKWGLHDGRNWLMQGVAAQGDRVQLEREWRDLREPSRVVISNVANAGVKGSLSELLAQWK--AEPQWITAVPYQCGVRNYYSNPAQLGSDRWAALVAAWVLERQGCLVVDAGTAMTVD 130          
BLAST of CX300910 vs. ExPASy Swiss-Prot
Match: COAX_NITEC (Type III pantothenate kinase OS=Nitrosomonas eutropha (strain C91) GN=coaX PE=3 SV=1)

HSP 1 Score: 98.2117 bits (243), Expect = 1.356e-20
Identity = 58/129 (44.96%), Postives = 75/129 (58.14%), Query Frame = -1
Query:   22 IDAGNTRIKFGCHDGRDWLLRDALPHVDLSAFR-----LPAACVPQRVLIANVAGAEVAQALRTRLAVVAPG-VPVEYLRAEALRCGLRNGYANPAQLGADRWAALVGAWRELGRACLVVSAGTATTVD 390
            ID+GNT IK+G H G  WL+R +    +    +     LPA   P  VLI+NVAG + A  L    A++ P  V   ++ A A +CG+ + Y  P QLG DRWAAL+ AW  + RACLVV  GTA TVD
Sbjct:   10 IDSGNTAIKWGLHTGDQWLVRGSALQSERMVLKQAWALLPAP--PASVLISNVAGLQAADDLT---ALLKPWYVQPHWITASASQCGVTSRYTKPEQLGCDRWAALIAAWYRVQRACLVVDVGTAMTVD 133          
BLAST of CX300910 vs. ExPASy Swiss-Prot
Match: COAX_METFK (Type III pantothenate kinase OS=Methylobacillus flagellatus (strain KT / ATCC 51484 / DSM 6875) GN=coaX PE=3 SV=1)

HSP 1 Score: 91.2781 bits (225), Expect = 1.658e-18
Identity = 58/125 (46.40%), Postives = 77/125 (61.60%), Query Frame = -1
Query:   22 IDAGNTRIKFGC--HDGRDWLLRDALPHVDLSAFRLPAACVPQRVLIANVAGAEVAQALRTRLAVVAPGVPVEYLRAEALRCGLRNGYANPAQLGADRWAALVGAWRELGRACLVVSAGTATTVD 390
            IDAGNTR K+    ++  + L R  L + D+ A    A C  +RV +ANVAG      L  RL ++  G+PV +  +    CG+ NGYA PAQLG DRWAA++ AW+   R+CLVV+AGTA TVD
Sbjct:    7 IDAGNTRTKWAVLQYETGEILQRGVL-NDDMPAEW--ALC--ERVAVANVAGPNRQALLEARLKLL--GLPVRWHASTLHACGVSNGYAIPAQLGVDRWAAMIAAWQHYQRSCLVVNAGTALTVD 124          
BLAST of CX300910 vs. ExPASy Swiss-Prot
Match: COAX_AZOSB (Type III pantothenate kinase OS=Azoarcus sp. (strain BH72) GN=coaX PE=3 SV=1)

HSP 1 Score: 89.7373 bits (221), Expect = 4.823e-18
Identity = 57/127 (44.88%), Postives = 74/127 (58.27%), Query Frame = -1
Query:   22 IDAGNTRIKFGCHD--GRDWLLRDALPHVDLSAFRLPAACVP--QRVLIANVAGAEVAQALRTRLAVVAPGVPVEYLRAEALRCGLRNGYANPAQLGADRWAALVGAWRELGRACLVVSAGTATTVD 390
            +D GNTRIK+      G   +   AL H ++   +   A  P  +R++ +NVAGA +  AL   L     G+   +++A     G+RNGY  PAQLG DRWAAL+GA R  G  CLVVSAGTATTVD
Sbjct:    5 LDVGNTRIKWRVVQAAGTPAMAEGALGHAEVHGLQAIVAGFPALRRMVGSNVAGASLGAALDGMLTTA--GIAGRWVQAARDEHGVRNGYDRPAQLGTDRWAALIGARRLHGGPCLVVSAGTATTVD 129          
BLAST of CX300910 vs. ExPASy Swiss-Prot
Match: COAX_METCA (Type III pantothenate kinase OS=Methylococcus capsulatus GN=coaX PE=3 SV=1)

HSP 1 Score: 88.5817 bits (218), Expect = 1.074e-17
Identity = 54/133 (40.60%), Postives = 72/133 (54.14%), Query Frame = -1
Query:    7 IDAGNTRIKF-----GCHDGRDWLLRDALPHVDLSAFRLPAACVPQRVLIANVAGAEVAQALRTRLAVVAPGVPVEYLRAEALRCGLRNGYANPAQLGADRWAALVGAWRELGRACLVVSAGTATTVDFPRAE 390
            ID GN+R+K+     G +        DA    +    ++ A   P+ VL++NVAG    + L    A     VPV ++R+EA   G+ N Y NPAQLG DRW  L+GAWR    AC +VSAGTA T+D   AE
Sbjct:    5 IDIGNSRVKWARSEPGRYTFGGAFATDASSLAEACESQMAALPRPEAVLVSNVAGMRAGRLLAD-WASARWVVPVRFVRSEASALGVVNAYPNPAQLGVDRWLGLIGAWRTRRDACCIVSAGTALTIDLLDAE 136          
BLAST of CX300910 vs. ExPASy Swiss-Prot
Match: COAX_BURCM (Type III pantothenate kinase OS=Burkholderia ambifaria (strain ATCC BAA-244 / AMMD) GN=coaX PE=3 SV=1)

HSP 1 Score: 87.8113 bits (216), Expect = 1.833e-17
Identity = 58/137 (42.34%), Postives = 76/137 (55.47%), Query Frame = -1
Query:    7 IDAGNTRIKFGCHDGRDWLL--------RDALPHVDLSAFRLPAACVPQRVLIANVAGAEVAQALRTRLAVVAPGVPVEYLRAEALRCGLRNGYANPAQLGADRWAALVGAWREL-GRACLVVSAGTATTVDFPRAE 390
            IDAGN+RIK+   D R  L+        RD     D SA  LP    P    I+NVAGA+VA  L   L    PG+P   +R++  +CG+ NGY  P QLG+DRWA L+GA     G   L+ + GTATT++  RA+
Sbjct:    8 IDAGNSRIKWALADARRTLVDTGAFGHTRDGGADPDWSA--LPR---PHGAWISNVAGADVAARLDALLDACWPGLPRTTIRSQPAQCGVTNGYTTPDQLGSDRWAGLIGARAAFPGEHLLIATFGTATTLEALRAD 139          
BLAST of CX300910 vs. ExPASy Swiss-Prot
Match: COAX_BURCH (Type III pantothenate kinase OS=Burkholderia cenocepacia (strain HI2424) GN=coaX PE=3 SV=1)

HSP 1 Score: 87.4261 bits (215), Expect = 2.394e-17
Identity = 58/137 (42.34%), Postives = 76/137 (55.47%), Query Frame = -1
Query:    7 IDAGNTRIKFGCHDGRDWLL--------RDALPHVDLSAFRLPAACVPQRVLIANVAGAEVAQALRTRLAVVAPGVPVEYLRAEALRCGLRNGYANPAQLGADRWAALVGAWREL-GRACLVVSAGTATTVDFPRAE 390
            IDAGN+RIK+   D R  L+        RD     D S   LP    P+   I+NVAGA+VA  L   L    PG+P   +RA  ++CG+ NGY  P QLG+DRWA L+GA     G   L+ + GTATT++  RA+
Sbjct:    8 IDAGNSRIKWALADARRSLVDTGAFGHTRDGGADPDWS--HLPR---PRGAWISNVAGADVAARLDALLDARWPGLPRTTIRARPVQCGVTNGYTTPEQLGSDRWAGLIGAHAAFPGEHLLIATFGTATTLEALRAD 139          
The following BLAST results are available for this feature:
BLAST of CX300910 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 43
Match NameE-valueIdentityDescription
COAX_AZOSE6.949e-2552.00Type III pantothenate kinase OS=Azoarcus sp. (stra... [more]
COAX_NITEU2.235e-2347.29Type III pantothenate kinase OS=Nitrosomonas europ... [more]
COAX_DECAR2.235e-2347.20Type III pantothenate kinase OS=Dechloromonas arom... [more]
COAX_NITMU3.228e-2246.40Type III pantothenate kinase OS=Nitrosospira multi... [more]
COAX_NITEC1.356e-2044.96Type III pantothenate kinase OS=Nitrosomonas eutro... [more]
COAX_METFK1.658e-1846.40Type III pantothenate kinase OS=Methylobacillus fl... [more]
COAX_AZOSB4.823e-1844.88Type III pantothenate kinase OS=Azoarcus sp. (stra... [more]
COAX_METCA1.074e-1740.60Type III pantothenate kinase OS=Methylococcus caps... [more]
COAX_BURCM1.833e-1742.34Type III pantothenate kinase OS=Burkholderia ambif... [more]
COAX_BURCH2.394e-1742.34Type III pantothenate kinase OS=Burkholderia cenoc... [more]

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Properties
Property NameValue
Genbank descriptionC08003F02SK PhyRootSw1 Citrus sinensis cDNA clone C08003F02, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX300910 ID=CX300910; Name=CX300910; organism=Citrus sinensis; type=EST; length=390bp
CAGGAATTCGGCACGAGGGAAATCGACGGTGGTCGCGGTGCCGGCACTGA
CGACGAGGCAGGCACGGCCGAGTTCACGCCACGCACCGACCAGCGCGGCC
CAGCGATCCGCGCCCAACTGCGCCGGGTTGGCGTAACCGTTGCGCAACCC
GCAACGCAAGGCCTCAGCGCGCAGGTATTCTACCGGCACGCCCGGCGCCA
CCACCGCTAGCCGCGTCCGCAAGGCCTGCGCCACCTCGGCACCAGCGACA
TTGGCGATCAGCACGCGCTGCGGCACGCACGCAGCCGGCAGGCGGAAGGC
GGAGAGATCTACATGCGGCAAAGCATCGCGCAGCAACCAGTCGCGGCCGT
CATGGCAGCCGAATTTGATGCGCGTGTTACCGGCGTCGAT
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