EY720618
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of EY720618 vs. ExPASy Swiss-Prot
Match: MGP_ARATH (Zinc finger protein MAGPIE OS=Arabidopsis thaliana GN=MGP PE=1 SV=1) HSP 1 Score: 120.553 bits (301), Expect = 1.424e-32 Identity = 54/66 (81.82%), Postives = 59/66 (89.39%), Query Frame = 2 Query: 137 PPPAKRKRNLPGNPDPTAEVIALSPXSLMATNRFLCEICNXGFKRDQNLQLHRRGHNLPWKLRARS 334 PP K+KRNLPGNPDP AEVIALSP +LMATNRFLCEIC GF+RDQNLQLHRRGHNLPWKL+ R+ Sbjct: 37 PPLVKKKRNLPGNPDPEAEVIALSPKTLMATNRFLCEICGKGFQRDQNLQLHRRGHNLPWKLKQRT 102 HSP 2 Score: 32.7278 bits (73), Expect = 1.424e-32 Identity = 13/20 (65.00%), Postives = 16/20 (80.00%), Query Frame = 1 Query: 328 KITTEIRKRVYVWPEPSCVH 387 + + E+RKRVYV PE SCVH Sbjct: 101 RTSKEVRKRVYVCPEKSCVH 120 HSP 3 Score: 27.7202 bits (60), Expect = 1.424e-32 Identity = 11/14 (78.57%), Postives = 12/14 (85.71%), Query Frame = 3 Query: 387 HKPARALGDLTGIR 428 H P RALGDLTGI+ Sbjct: 121 HHPTRALGDLTGIK 134
BLAST of EY720618 vs. ExPASy Swiss-Prot
Match: NUC_ARATH (Zinc finger protein NUTCRACKER OS=Arabidopsis thaliana GN=NUC PE=2 SV=1) HSP 1 Score: 120.939 bits (302), Expect = 2.162e-27 Identity = 59/100 (59.00%), Postives = 70/100 (70.00%), Query Frame = 2 Query: 137 PPPAKRKRNLPGNPDPTAEVIALSPXSLMATNRFLCEICNXGFKRDQNLQLHRRGHNLPWKLRARSPLR-SEREFTSGQNPHVFTQTGSCTG*SDGHQKH 433 PP K+KRNLPGNPDP AEVIALSP +LMATNRFLCE+C GF+RDQNLQLHRRGHNLPWKL+ R+ +R + + V + G G +KH Sbjct: 33 PPLVKKKRNLPGNPDPEAEVIALSPTTLMATNRFLCEVCGKGFQRDQNLQLHRRGHNLPWKLKQRTSKEVRKRVYVCPEKTCVHHHSSRALGDLTGIKKH 132
BLAST of EY720618 vs. ExPASy Swiss-Prot
Match: JKD_ARATH (Zinc finger protein JACKDAW OS=Arabidopsis thaliana GN=JKD PE=1 SV=1) HSP 1 Score: 114.39 bits (285), Expect = 2.354e-27 Identity = 51/63 (80.95%), Postives = 57/63 (90.48%), Query Frame = 2 Query: 146 AKRKRNLPGNPDPTAEVIALSPXSLMATNRFLCEICNXGFKRDQNLQLHRRGHNLPWKLRARS 334 AK+KRN PG PDP A+VIALSP +LMATNRF+CEICN GF+RDQNLQLHRRGHNLPWKL+ RS Sbjct: 52 AKKKRNQPGTPDPDADVIALSPTTLMATNRFVCEICNKGFQRDQNLQLHRRGHNLPWKLKQRS 114 HSP 2 Score: 25.0238 bits (53), Expect = 2.354e-27 Identity = 10/14 (71.43%), Postives = 12/14 (85.71%), Query Frame = 3 Query: 387 HKPARALGDLTGIR 428 H +RALGDLTGI+ Sbjct: 134 HDASRALGDLTGIK 147 HSP 3 Score: 23.8682 bits (50), Expect = 2.354e-27 Identity = 8/15 (53.33%), Postives = 12/15 (80.00%), Query Frame = 1 Query: 343 IRKRVYVWPEPSCVH 387 I+K+VY+ P +CVH Sbjct: 119 IKKKVYICPIKTCVH 133 The following BLAST results are available for this feature:
BLAST of EY720618 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 3
Properties
Sequences
The
following sequences are available for this feature:
EST sequence >EY720618 ID=EY720618; Name=EY720618; organism=Citrus sinensis; type=EST; length=434bpback to top |