CX047189
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of CX047189 vs. ExPASy Swiss-Prot
Match: U4972_POPTR (UPF0497 membrane protein 2 OS=Populus trichocarpa GN=POPTRDRAFT_822486 PE=3 SV=1) HSP 1 Score: 233.032 bits (593), Expect = 9.824e-61 Identity = 112/143 (78.32%), Postives = 128/143 (89.51%), Query Frame = 1 Query: 1 ASSIFMLTNSRGSNSPRWYDYDAFRFVFAANAIVAIYSLFEMGVSVWEISRGATFFPEVLQVWFDFGHDQVFAYLLLSADSAGTELARTLKGTDTCTAANAFCLQSDISVALGFAGFLFIGVSSLLSGFRVACFIINGSRFHL 429 AS++FMLTNSRGS+S WY++DAFR+VFAANAIVAIYSLFEM SVWEISR AT FPE+ QVWFDFGHDQVFAYLLLSA++AGTELARTLK DTCT AFC+QSDI++ LGFAGFLF+G+SSL SGFRV CFIINGSRF++ Sbjct: 46 ASAVFMLTNSRGSDSLHWYNFDAFRYVFAANAIVAIYSLFEMAASVWEISRNATLFPEICQVWFDFGHDQVFAYLLLSANTAGTELARTLK--DTCTDNKAFCVQSDIAIVLGFAGFLFLGISSLFSGFRVVCFIINGSRFYV 186
BLAST of CX047189 vs. ExPASy Swiss-Prot
Match: U4973_RICCO (UPF0497 membrane protein 3 OS=Ricinus communis GN=RCOM_0464280 PE=2 SV=1) HSP 1 Score: 228.794 bits (582), Expect = 1.853e-59 Identity = 111/143 (77.62%), Postives = 125/143 (87.41%), Query Frame = 1 Query: 1 ASSIFMLTNSRGSNSPRWYDYDAFRFVFAANAIVAIYSLFEMGVSVWEISRGATFFPEVLQVWFDFGHDQVFAYLLLSADSAGTELARTLKGTDTCTAANAFCLQSDISVALGFAGFLFIGVSSLLSGFRVACFIINGSRFHL 429 ASS+FMLTN P WY +DAFR+VFAANAIVAIYSLFEM SVWEISRG T FPE+LQVWFDFGHDQVFAYLLLSADSA T LA+TLKG DTC A+NAFC+QS I++ALGFAGFLF+G+SSLLSGFRV CF+INGSRF++ Sbjct: 56 ASSVFMLTN------PTWYHFDAFRYVFAANAIVAIYSLFEMAASVWEISRGNTLFPEILQVWFDFGHDQVFAYLLLSADSAATALAKTLKGGDTCAASNAFCVQSYIAIALGFAGFLFLGLSSLLSGFRVVCFLINGSRFYV 192
BLAST of CX047189 vs. ExPASy Swiss-Prot
Match: U497C_POPTR (UPF0497 membrane protein 12 OS=Populus trichocarpa GN=POPTRDRAFT_820327 PE=3 SV=1) HSP 1 Score: 223.787 bits (569), Expect = 5.960e-58 Identity = 107/143 (74.83%), Postives = 125/143 (87.41%), Query Frame = 1 Query: 1 ASSIFMLTNSRGSNSPRWYDYDAFRFVFAANAIVAIYSLFEMGVSVWEISRGATFFPEVLQVWFDFGHDQVFAYLLLSADSAGTELARTLKGTDTCTAANAFCLQSDISVALGFAGFLFIGVSSLLSGFRVACFIINGSRFHL 429 AS++FMLTNSRGS+S WY++DAFR+VFAANAIVA+YSLFEM +VWEISR AT FPEV QVWFDFGHDQVFAYLLLSA+S G+E+ART+K D CT FC+QSDI++ALGF GFLF+GVSSL SGFRV CFIINGSRF++ Sbjct: 46 ASAVFMLTNSRGSDSFHWYNFDAFRYVFAANAIVAVYSLFEMTAAVWEISRNATLFPEVCQVWFDFGHDQVFAYLLLSANSTGSEMARTMK--DACTDNKPFCVQSDIAIALGFVGFLFLGVSSLFSGFRVVCFIINGSRFYV 186
BLAST of CX047189 vs. ExPASy Swiss-Prot
Match: U497M_ARATH (UPF0497 membrane protein At3g55390 OS=Arabidopsis thaliana GN=At3g55390 PE=2 SV=1) HSP 1 Score: 223.402 bits (568), Expect = 7.784e-58 Identity = 104/143 (72.73%), Postives = 118/143 (82.52%), Query Frame = 1 Query: 1 ASSIFMLTNSRGSNSPRWYDYDAFRFVFAANAIVAIYSLFEMGVSVWEISRGATFFPEVLQVWFDFGHDQVFAYLLLSADSAGTELARTLKGTDTCTAANAFCLQSDISVALGFAGFLFIGVSSLLSGFRVACFIINGSRFHL 429 AS++FMLTNSRGS SP WYD+DAFRFVF ANAIVA+YS+FEMG VWE SR T +PE QVWFDFGHDQVF+YLLLSA SA LART++G DTCTA AFCLQSD+++ LGFA FLF+ SS SGFRVACF+I GSRFHL Sbjct: 50 ASAVFMLTNSRGSASPHWYDFDAFRFVFVANAIVALYSVFEMGTCVWEFSRETTLWPEAFQVWFDFGHDQVFSYLLLSAGSAAAALARTMRGGDTCTANKAFCLQSDVAIGLGFAAFLFLAFSSCFSGFRVACFLITGSRFHL 192
BLAST of CX047189 vs. ExPASy Swiss-Prot
Match: U4977_PHYPA (UPF0497 membrane protein 7 OS=Physcomitrella patens GN=PHYPADRAFT_182225 PE=2 SV=1) HSP 1 Score: 129.028 bits (323), Expect = 1.998e-29 Identity = 60/122 (49.18%), Postives = 84/122 (68.85%), Query Frame = 1 Query: 52 WYDYDAFRFVFAANAIVAIYSLFEMGVSVWEISRGATFFPEVLQVWFDFGHDQVFAYLLLSADSAGTELARTLKGTDT-------CTAANAFCLQSDISVALGFAGFLFIGVSSLLSGFRVA 396 WYD++ +R+V A NAI+ IYS E ++V+ +G+ PE+ QVWFD+GHDQ FAYLL SA+SAG +A+ L+ +T CT A +C Q+ +S+ALGF FLF+ +SSLL+G RVA Sbjct: 65 WYDFEPYRYVLAVNAIICIYSFVETWLAVYTYLQGSYLLPEIFQVWFDYGHDQGFAYLLFSANSAGVAMAQLLQSGNTLIHGAYHCTEAGGYCTQARVSIALGFVAFLFLALSSLLTGLRVA 186
BLAST of CX047189 vs. ExPASy Swiss-Prot
Match: U4979_PHYPA (UPF0497 membrane protein 9 OS=Physcomitrella patens GN=PHYPADRAFT_135270 PE=2 SV=1) HSP 1 Score: 127.102 bits (318), Expect = 7.592e-29 Identity = 59/122 (48.36%), Postives = 82/122 (67.21%), Query Frame = 1 Query: 52 WYDYDAFRFVFAANAIVAIYSLFEMGVSVWEISRGATFFPEVLQVWFDFGHDQVFAYLLLSADSAGTELARTLKGTDT-------CTAANAFCLQSDISVALGFAGFLFIGVSSLLSGFRVA 396 W+D+D FR+VFA NAI+ +YS E ++V+ +SRG PE QVWFD+GHDQ FA LL SA+S G +A+ L+ T C+ A A+C Q+ +S+A+GF FLF+ +SS L+G RVA Sbjct: 73 WHDFDPFRYVFAVNAIICVYSFVETWLAVYTLSRGTLLLPETFQVWFDYGHDQGFACLLFSANSVGIAMAQLLQSGSTLIQGQYYCSDAGAYCTQARVSIAMGFGAFLFLALSSFLTGLRVA 194
BLAST of CX047189 vs. ExPASy Swiss-Prot
Match: U4978_PHYPA (UPF0497 membrane protein 8 OS=Physcomitrella patens GN=PHYPADRAFT_192523 PE=2 SV=1) HSP 1 Score: 126.331 bits (316), Expect = 1.295e-28 Identity = 61/122 (50.00%), Postives = 80/122 (65.57%), Query Frame = 1 Query: 52 WYDYDAFRFVFAANAIVAIYSLFEMGVSVWEISRGATFFPEVLQVWFDFGHDQVFAYLLLSADSAGTELARTLK-------GTDTCTAANAFCLQSDISVALGFAGFLFIGVSSLLSGFRVA 396 WYD+D FR+V A NAI+ IYS E+ ++V+ + F PE QVWFD+GHDQ FAYLL SA+SAG +A+ L+ G C+ A FC Q+ S+ LGF FLF+ +SSLL+G RVA Sbjct: 65 WYDFDPFRYVLAVNAIICIYSFVEIWLAVYTYLKDTLFLPETFQVWFDYGHDQGFAYLLFSANSAGIAMAQLLQSGNSLIHGAYRCSDAGVFCTQARASIGLGFGAFLFLALSSLLTGLRVA 186
BLAST of CX047189 vs. ExPASy Swiss-Prot
Match: U497D_PHYPA (UPF0497 membrane protein 13 OS=Physcomitrella patens GN=PHYPADRAFT_161913 PE=2 SV=1) HSP 1 Score: 70.0922 bits (170), Expect = 1.101e-11 Identity = 41/148 (27.70%), Postives = 79/148 (53.38%), Query Frame = 1 Query: 7 SIFMLTNSRGS--------NSPRWYDYDAFRFVFAANAIVAIYSLFEMGVSVWEISRGATFFPEV-LQVWFDFGHDQVFAYLLLSADSAGTELARTL----KGTDTCTA--ANAFCLQSDISVALGFAGFLFIGVSSLLSGFRVACFI 405 +I ++ ++RGS + ++ + A+R++ A N IV +YS F+ ++ + G +F P + + W FG DQ+F YLLLSA ++ +A G C+ +FC ++D++V + F L + S++L+ +R+A + Sbjct: 223 AIVVMCSTRGSMRTDGVDFGTLKFNHFQAYRYLVAVNVIVFVYSTFQFIQLLYTVILGISFIPSIFISTWMTFGFDQLFLYLLLSASTSAATVANMSYTGEMGIQLCSRFDVGSFCSKADVAVTMSFFAVLAMLSSTILAIYRIAVLL 370 The following BLAST results are available for this feature:
BLAST of CX047189 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 8
Properties
Sequences
The
following sequences are available for this feature:
EST sequence >CX047189 ID=CX047189; Name=CX047189; organism=Citrus sinensis; type=EST; length=640bpback to top |