EY664871

Overview
NameEY664871
Unique NameEY664871
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length852
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of EY664871 vs. ExPASy Swiss-Prot
Match: CYB5_ORYSJ (Cytochrome b5 OS=Oryza sativa subsp. japonica GN=Os05g0108800 PE=2 SV=2)

HSP 1 Score: 83.1889 bits (204), Expect = 2.044e-15
Identity = 35/78 (44.87%), Postives = 54/78 (69.23%), Query Frame = 3
Query:  450 SNKASKIYSKDEVTLHNKRDDCWIIIKNKVYDVTSYVEEHPGG-DAILAHAGDDSTEGFYGPQHATRVFDMIDDFYIG 680
            SN   K+Y+ +EV  HN +DDCW+II  KVY+V+ ++E+HPGG D +L+  G D+T+ F    H+T    M+D++Y+G
Sbjct:    2 SNDNKKVYTLEEVAKHNSKDDCWLIIGGKVYNVSKFLEDHPGGDDVLLSSTGKDATDDFEDVGHSTTARAMMDEYYVG 79          
BLAST of EY664871 vs. ExPASy Swiss-Prot
Match: CYB5_BOROF (Cytochrome b5 OS=Borago officinalis PE=2 SV=1)

HSP 1 Score: 77.0258 bits (188), Expect = 1.465e-13
Identity = 34/73 (46.58%), Postives = 49/73 (67.12%), Query Frame = 3
Query:  465 KIYSKDEVTLHNKRDDCWIIIKNKVYDVTSYVEEHPGGDAILAHA-GDDSTEGFYGPQHATRVFDMIDDFYIG 680
            KI++  EV  HN   DCW+II  KVYDVT ++E+HPGGD +L  A G D+T+ F    H++    M+D++Y+G
Sbjct:    3 KIFTLAEVAQHNNSKDCWLIINGKVYDVTKFLEDHPGGDDVLLSATGKDATDDFEDIGHSSSAKAMLDEYYVG 75          
BLAST of EY664871 vs. ExPASy Swiss-Prot
Match: CYB51_ARATH (Cytochrome b5 isoform 1 OS=Arabidopsis thaliana GN=At5g53560 PE=2 SV=2)

HSP 1 Score: 77.0258 bits (188), Expect = 1.465e-13
Identity = 34/73 (46.58%), Postives = 49/73 (67.12%), Query Frame = 3
Query:  465 KIYSKDEVTLHNKRDDCWIIIKNKVYDVTSYVEEHPGGD-AILAHAGDDSTEGFYGPQHATRVFDMIDDFYIG 680
            K+ S +EV+ HNK  DCW+II  KVYDVT ++++HPGGD  +L+  G D+T  F    H+    DM+D ++IG
Sbjct:    6 KVLSFEEVSKHNKTKDCWLIISGKVYDVTPFMDDHPGGDEVLLSSTGKDATNDFEDVGHSDTARDMMDKYFIG 78          
BLAST of EY664871 vs. ExPASy Swiss-Prot
Match: CYB5_TOBAC (Cytochrome b5 OS=Nicotiana tabacum PE=2 SV=1)

HSP 1 Score: 76.6406 bits (187), Expect = 1.913e-13
Identity = 31/74 (41.89%), Postives = 51/74 (68.92%), Query Frame = 3
Query:  462 SKIYSKDEVTLHNKRDDCWIIIKNKVYDVTSYVEEHPGGDAILAHA-GDDSTEGFYGPQHATRVFDMIDDFYIG 680
            +K+++  EV+ HN   DCW++I  KVYDVT ++++HPGGD +L  A G D+T+ F    H++    M+D++Y+G
Sbjct:    5 TKVFTLAEVSQHNNAKDCWLVISGKVYDVTKFLDDHPGGDEVLLSATGKDATDDFEDVGHSSSARAMLDEYYVG 78          
BLAST of EY664871 vs. ExPASy Swiss-Prot
Match: CYB5_BRAOB (Cytochrome b5 OS=Brassica oleracea var. botrytis GN=CYB5 PE=1 SV=1)

HSP 1 Score: 75.485 bits (184), Expect = 4.262e-13
Identity = 33/73 (45.21%), Postives = 48/73 (65.75%), Query Frame = 3
Query:  465 KIYSKDEVTLHNKRDDCWIIIKNKVYDVTSYVEEHPGGD-AILAHAGDDSTEGFYGPQHATRVFDMIDDFYIG 680
            K+   +EV+ HNK  DCW+II  KVYDVT ++++HPGGD  +L+  G D+T  F    H+    DM++ +YIG
Sbjct:    6 KVLGFEEVSQHNKTKDCWLIISGKVYDVTPFMDDHPGGDEVLLSSTGKDATNDFEDVGHSDTARDMMEKYYIG 78          
BLAST of EY664871 vs. ExPASy Swiss-Prot
Match: CYB52_ARATH (Probable cytochrome b5 isoform 2 OS=Arabidopsis thaliana GN=At2g32720 PE=1 SV=1)

HSP 1 Score: 75.485 bits (184), Expect = 4.262e-13
Identity = 36/90 (40.00%), Postives = 57/90 (63.33%), Query Frame = 3
Query:  462 SKIYSKDEVTLHNKRDDCWIIIKNKVYDVTSYVEEHPGG-DAILAHAGDDSTEGFYGPQHATRVFDMIDDFYIGGSEXHITCSQRVVKLT 728
            +KI++  EV+ HN+  DCWI+I  KVY+VT ++E+HPGG D +L+  G D+T+ F    H+    +M++ +Y+G  E   T   + VK T
Sbjct:    5 AKIFTLSEVSEHNQAHDCWIVINGKVYNVTKFLEDHPGGDDVLLSSTGKDATDDFEDVGHSESAREMMEQYYVG--EIDPTTIPKKVKYT 92          
BLAST of EY664871 vs. ExPASy Swiss-Prot
Match: CYB5_RHIST (Cytochrome b5 OS=Rhizopus stolonifer PE=2 SV=1)

HSP 1 Score: 74.3294 bits (181), Expect = 9.495e-13
Identity = 32/74 (43.24%), Postives = 49/74 (66.22%), Query Frame = 3
Query:  462 SKIYSKDEVTLHNKRDDCWIIIKNKVYDVTSYVEEHPGGDAILA-HAGDDSTEGFYGPQHATRVFDMIDDFYIG 680
            +KI+S DEV+ H  + D W++I NKVYD+T +V EHPGG+ +L    G D+TE F    H+    +M++++ IG
Sbjct:    3 AKIFSLDEVSKHKTKSDLWVVIHNKVYDITRFVVEHPGGEEVLVDEGGKDATEAFEDIGHSDEAREMLEEYLIG 76          
BLAST of EY664871 vs. ExPASy Swiss-Prot
Match: NIA1_PHAVU (Nitrate reductase [NADH] 1 OS=Phaseolus vulgaris GN=NIA1 PE=3 SV=1)

HSP 1 Score: 73.9442 bits (180), Expect = 1.240e-12
Identity = 39/86 (45.35%), Postives = 53/86 (61.63%), Query Frame = 3
Query:  426 KSTRSSANSNKASKIYSKDEVTLHNKRDDCWIIIKNKVYDVTSYVEEHPGG-DAILAHAGDDSTEGFYGPQHATRVFDMIDDFYIG 680
            K + SS   N A+K YS  EV  HN RD  WII+   VYD T ++++HPGG D+IL +AG D TE F    H+ +   M++D+ IG
Sbjct:  503 KKSVSSPFMNTATKSYSLSEVRRHNNRDSAWIIVNGHVYDCTRFLKDHPGGEDSILLNAGTDCTEEFEA-IHSDKAKKMLEDYRIG 587          
BLAST of EY664871 vs. ExPASy Swiss-Prot
Match: CYB5S_TOBAC (Cytochrome b5, seed isoform OS=Nicotiana tabacum PE=2 SV=1)

HSP 1 Score: 73.9442 bits (180), Expect = 1.240e-12
Identity = 31/74 (41.89%), Postives = 51/74 (68.92%), Query Frame = 3
Query:  462 SKIYSKDEVTLHNKRDDCWIIIKNKVYDVTSYVEEHP-GGDAILAHAGDDSTEGFYGPQHATRVFDMIDDFYIG 680
            SK+++  EV+ HN   DCW+II  KVY+VT ++E+HP GG+ +L+  G D+T+ F    H++    M+D++Y+G
Sbjct:    5 SKVFTLAEVSNHNNAKDCWLIISGKVYNVTKFLEDHPGGGEVLLSATGKDATDDFEDIGHSSSARAMLDEYYVG 78          
BLAST of EY664871 vs. ExPASy Swiss-Prot
Match: NIA_PETHY (Nitrate reductase [NADH] OS=Petunia hybrida GN=NIA PE=2 SV=1)

HSP 1 Score: 73.1738 bits (178), Expect = 2.115e-12
Identity = 38/86 (44.19%), Postives = 53/86 (61.63%), Query Frame = 3
Query:  426 KSTRSSANSNKASKIYSKDEVTLHNKRDDCWIIIKNKVYDVTSYVEEHPGG-DAILAHAGDDSTEGFYGPQHATRVFDMIDDFYIG 680
            K + S+   N ASK+YS  EV  HN  D  WII+   VYD T ++++HPGG D+IL +AG D TE F    H+ +   +++DF IG
Sbjct:  523 KKSISTPFMNTASKMYSMSEVKKHNSADSAWIIVHGHVYDATRFLKDHPGGIDSILINAGTDCTEEF-DAIHSDKAKKLLEDFRIG 607          
The following BLAST results are available for this feature:
BLAST of EY664871 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 32
Match NameE-valueIdentityDescription
CYB5_ORYSJ2.044e-1544.87Cytochrome b5 OS=Oryza sativa subsp. japonica GN=O... [more]
CYB5_BOROF1.465e-1346.58Cytochrome b5 OS=Borago officinalis PE=2 SV=1[more]
CYB51_ARATH1.465e-1346.58Cytochrome b5 isoform 1 OS=Arabidopsis thaliana GN... [more]
CYB5_TOBAC1.913e-1341.89Cytochrome b5 OS=Nicotiana tabacum PE=2 SV=1[more]
CYB5_BRAOB4.262e-1345.21Cytochrome b5 OS=Brassica oleracea var. botrytis G... [more]
CYB52_ARATH4.262e-1340.00Probable cytochrome b5 isoform 2 OS=Arabidopsis th... [more]
CYB5_RHIST9.495e-1343.24Cytochrome b5 OS=Rhizopus stolonifer PE=2 SV=1[more]
NIA1_PHAVU1.240e-1245.35Nitrate reductase [NADH] 1 OS=Phaseolus vulgaris G... [more]
CYB5S_TOBAC1.240e-1241.89Cytochrome b5, seed isoform OS=Nicotiana tabacum P... [more]
NIA_PETHY2.115e-1244.19Nitrate reductase [NADH] OS=Petunia hybrida GN=NIA... [more]

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Properties
Property NameValue
Genbank descriptionCS00-C1-101-071-D09-CT.F Sweet orange leaf, infected with Xylella fastidiosa (stage 1 of 2) Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY664871 ID=EY664871; Name=EY664871; organism=Citrus sinensis; type=EST; length=852bp
CTTCAGTATGGAGTCGATTAAGTCCACTATCACGCTTGAATATCTTGGCG
AATAAGTCCAGTAGTCGAATATAAGGTCGAGAAAGTGGAGTAAGTCAAGG
ACGAGGTTAAGGAGTTGAATACGAAGTCAAGTGCAAGATCGAGAAAGCCA
AGTAGCAGTAGATGTAGCGGCCTAGAACCAAGTGAAAACAAATAACACCG
CGGCTGTGCCGGAGAGGGAATACTAACAGAAGTAAAATCTATCCGGCAAA
TCCGATTCGAATCTCTCTACTTAATCTGATCCATTGCTGTTTTTATAATT
CACAGAGCACGTAGCAGCTGGGTAGTGGATTTTGAAAGATGGTTATAATC
GTGGCCGCATTAATTTTAGGTGCCATTTTGGGAGTCTTTATTTTCATCCC
ACGACACCCTGCATCTGGCCATTCAAAAAGTACTCGCTCAAGTGCTAACA
GTAACAAGGCATCAAAAATCTACAGCAAAGATGAAGTAACATTGCATAAT
AAGAGAGATGACTGTTGGATCATTATCAAGAACAAGGTGTATGATGTTAC
CTCATATGTAGAGGAACACCCAGGTGGCGATGCTATCCTAGCACATGCTG
GTGATGATTCAACTGAAGGATTTTATGGGCCACAGCATGCAACCCGAGTC
TTTGACATGATAGATGACTTTTACATTGGGGGATCTGAAGNNCATATCAC
TTGCAGCCAACGAGTTGTAAAATTAACAACAGACTCTGGACTTNCATGTT
TTATTCTTNCATTGGCTTTNNNTTGCCTAAACTTGACACCTTTTTGTGGC
CTTTACATTTTAAGAGAAATCTTTCCTTTTCTTTTAAAAAAAAAAAAAAA
AA
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