EY740959

Overview
NameEY740959
Unique NameEY740959
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length855
Libraries
Library NameType
Sweet orange fruit, development stadium (6 of 6)cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of EY740959 vs. ExPASy Swiss-Prot
Match: FTSH2_ARATH (Cell division protease ftsH homolog 2, chloroplastic OS=Arabidopsis thaliana GN=FTSH2 PE=1 SV=1)

HSP 1 Score: 239.195 bits (609), Expect = 1.120e-69
Identity = 137/188 (72.87%), Postives = 149/188 (79.26%), Query Frame = 2
Query:   47 MAASSACLVGNILTTHKT-KTNLSKDFHGRHLLFNSSFRSLEKKPKVAVVKASLS-QKQHEGRRGFLKKLLGNVGVGTALLGSGKAYADEQGVSSSRMSYSRFLEYLDKDRVKKVDLFENGTIAIVEAISPELGNRVQRVRVQLPGLSQELLQKFGEKNIDFAAHNAQEDSGSLLFNLIWESGFPTYL 604
            MAASSACLVGN L+ + T K  LSK F GR     +SF S+ +  KV VVKASL  +K+ EGRR FLK LLGN GVG  L+ SGKA ADEQGVSSSRMSYSRFLEYLDKDRV KVDL+ENGTIAIVEA+SPELGNRV+RVRVQLPGLSQELLQK   KNIDFAAHNAQED GS+LFNLI    FP  L
Sbjct:    1 MAASSACLVGNGLSVNTTTKQRLSKHFSGRQ----TSFSSVIRTSKVNVVKASLDGKKKQEGRRDFLKILLGNAGVG--LVASGKANADEQGVSSSRMSYSRFLEYLDKDRVNKVDLYENGTIAIVEAVSPELGNRVERVRVQLPGLSQELLQKLRAKNIDFAAHNAQEDQGSVLFNLIGNLAFPALL 182          

HSP 2 Score: 46.2098 bits (108), Expect = 1.120e-69
Identity = 27/47 (57.45%), Postives = 31/47 (65.96%), Query Frame = 3
Query:  717 NTGVTFDDFARI*LSKQDSLEVVGFLKKPRDVRNWGA-YQKGGLLVG 854
            NTGVTFDD A +  +KQD +EVV FLKKP      GA   KG LL+G
Sbjct:  221 NTGVTFDDVAGVDEAKQDFMEVVEFLKKPERFTAVGAKIPKGVLLIG 267          
BLAST of EY740959 vs. ExPASy Swiss-Prot
Match: FTSH8_ARATH (Cell division protease ftsH homolog 8, chloroplastic OS=Arabidopsis thaliana GN=FTSH8 PE=1 SV=1)

HSP 1 Score: 227.254 bits (578), Expect = 3.223e-66
Identity = 125/188 (66.49%), Postives = 137/188 (72.87%), Query Frame = 2
Query:   47 MAASSACLVGNILTTHKTKTNLSKDFHGRHLLFNSSFRSLEKKPKVAVVKASLSQKQHEGRRGFLKKLLGNVGVGTALLGSGKAYADEQG--VSSSRMSYSRFLEYLDKDRVKKVDLFENGTIAIVEAISPELGNRVQRVRVQLPGLSQELLQKFGEKNIDFAAHNAQEDSGSLLFNLIWESGFPTYL 604
            MAASSACL+GN L+ + TK    K               L++  KV VVKASL +K+HEGRRGF K LLGN   G  LL SG A ADEQG  VSSSRMSYSRFLEYLDK RV+KVDL+ENGTIAIVEA+SPELGNR+QRVRVQLPGLSQELLQK   KNIDFAAHNAQED GS + NLI    FP  L
Sbjct:    1 MAASSACLLGNGLSVYTTKQRFQK-------------LGLDRTSKVTVVKASLDEKKHEGRRGFFKLLLGNAAAGVGLLASGNANADEQGQGVSSSRMSYSRFLEYLDKGRVEKVDLYENGTIAIVEAVSPELGNRIQRVRVQLPGLSQELLQKLRAKNIDFAAHNAQEDQGSPILNLIGNLAFPVIL 175          

HSP 2 Score: 46.595 bits (109), Expect = 3.223e-66
Identity = 28/47 (59.57%), Postives = 31/47 (65.96%), Query Frame = 3
Query:  717 NTGVTFDDFARI*LSKQDSLEVVGFLKKPRDVRNWGA-YQKGGLLVG 854
            NTGVTFDD A +  +KQD +EVV FLKKP      GA   KG LLVG
Sbjct:  214 NTGVTFDDVAGVDEAKQDFMEVVEFLKKPERFTAVGARIPKGVLLVG 260          
BLAST of EY740959 vs. ExPASy Swiss-Prot
Match: FTSH2_ORYSJ (Cell division protease ftsH homolog 2, chloroplastic OS=Oryza sativa subsp. japonica GN=FTSH2 PE=3 SV=1)

HSP 1 Score: 206.453 bits (524), Expect = 5.391e-60
Identity = 118/170 (69.41%), Postives = 127/170 (74.71%), Query Frame = 2
Query:  191 VKASLSQKQHEGRRGFLKKLLGNVGVGT-ALLGSGKAYADEQGVSSSRMSYSRFLEYLDKDRVKKVDLFENGTIAIVEAISPELGNRVQRVRVQLPGLSQELLQKFGEKNIDFAAHNAQEDSGSLLFNLIWESGFPTYLNWRAVPSLKAFIWWNGRSWWAWFPLGFGXSK 697
            V ASL  K ++ RR FLK  LGN+GVG   LLG+ +A A+EQGVSSSRMSYSRFLEYLDKDRVKKVDLFENGTIAIVEAISPELGNRVQRVRVQLPGLSQELLQK  EKNIDFAAH+ QEDSGSLLFNLI    FP  L        +      G      FPLGFG S+
Sbjct:   31 VTASLEHKTNDARRKFLKLALGNLGVGLPTLLGAKRALAEEQGVSSSRMSYSRFLEYLDKDRVKKVDLFENGTIAIVEAISPELGNRVQRVRVQLPGLSQELLQKLREKNIDFAAHSNQEDSGSLLFNLIGNLAFPLILIGGLFLLSRRAQGGLGGPNGPGFPLGFGQSR 200          

HSP 2 Score: 46.595 bits (109), Expect = 5.391e-60
Identity = 28/47 (59.57%), Postives = 31/47 (65.96%), Query Frame = 3
Query:  717 NTGVTFDDFARI*LSKQDSLEVVGFLKKPRDVRNWGA-YQKGGLLVG 854
            NTGVTFDD A +  +KQD +EVV FLKKP      GA   KG LLVG
Sbjct:  208 NTGVTFDDVAGVDEAKQDFMEVVEFLKKPERFTAVGARIPKGVLLVG 254          
BLAST of EY740959 vs. ExPASy Swiss-Prot
Match: FTSH6_ORYSJ (Cell division protease ftsH homolog 6, chloroplastic OS=Oryza sativa subsp. japonica GN=FTSH6 PE=3 SV=1)

HSP 1 Score: 111.309 bits (277), Expect = 2.059e-29
Identity = 73/187 (39.04%), Postives = 101/187 (54.01%), Query Frame = 2
Query:  158 RSLEKKPKVAVVKASLSQKQHEGRRGFLKKLLGNVGVGTALLGSGKAYADE---QGVSSSRMSYSRFLEYLDKDRVKKVDLFENGTIAIVEAISPELGNRVQRVRVQLPGLSQELLQKFGEKNIDFAAHNAQEDSGSLLFNLIWESGFP----TYLNWRAVPSLKAFIWWNGRSWWAWFPLGFGXSK 697
            R+     K+    +S S+     RR  L+     +G+G  L  +  A A+    + V+S+RMSYSRFLEYLD   VKKVD FENGT+A+ E       +RV RV+VQLPGL  EL++K  +K +DFAAH  +  +G +L +L+   GFP      L WR+ P++      N        P G G SK
Sbjct:   30 RTTPPPAKITPPSSSSSEAAGLSRRRLLQS--AGLGLGLGLTAARPARAEATAPEEVTSNRMSYSRFLEYLDAGAVKKVDFFENGTVAVAEVDDAAALSRVHRVKVQLPGLPAELVRKLRDKGVDFAAHPVEPSAGVMLLDLLVNFGFPLLFVASLLWRS-PTM------NNPGGGPSLPFGLGKSK 207          

HSP 2 Score: 39.2762 bits (90), Expect = 2.059e-29
Identity = 25/46 (54.35%), Postives = 28/46 (60.87%), Query Frame = 3
Query:  720 TGVTFDDFARI*LSKQDSLEVVGFLKKPRDVRNWGA-YQKGGLLVG 854
            TGVTFDD A +  +KQD  E+V FLK P      GA   KG LLVG
Sbjct:  216 TGVTFDDVAGVDEAKQDFQEIVQFLKFPEKFTAVGARTPKGVLLVG 261          
BLAST of EY740959 vs. ExPASy Swiss-Prot
Match: FTSH6_ARATH (Cell division protease ftsH homolog 6, chloroplastic OS=Arabidopsis thaliana GN=FTSH6 PE=2 SV=1)

HSP 1 Score: 103.605 bits (257), Expect = 4.025e-27
Identity = 74/195 (37.95%), Postives = 101/195 (51.79%), Query Frame = 2
Query:   44 KMAASSACL---VGNILTTHKTKTNLSKDFHGRHLLFNSSFRSLEKKPKVAVVKASLSQKQHEGRRGFLKKLLGNVG----VGTALLGSGKAYADEQ-GVSSSRMSYSRFLEYLDKDRVKKVDLFENGTIAIVEAISPELGNRVQRVRVQLPGLSQELLQKFGEKNIDFAAHNAQEDSGSLLFNLIWESGFPTYL 604
            KMA+SS+ L   + NI T  K      K              SL K               H+  +  L  L   +G    +GT L    KA  +     +S+RMSYSRFL++L ++ VKKVDL ENGT+AIVE  +P +G ++QRVRV LPGL  +L+++  EKN+DFAAH    + G+ L N +   GFP  L
Sbjct:    2 KMASSSSALSFPLSNIPTCSKKSQQFQKP------------ASLSKSSHTHKPSLKTQILHHKFTKRNLLSLTTALGFTSALGTVLAHPAKAEPEAPIEATSNRMSYSRFLQHLKENEVKKVDLIENGTVAIVEISNPVVG-KIQRVRVNLPGLPVDLVREMKEKNVDFAAHPMNVNWGAFLLNFLGNLGFPLIL 183          

HSP 2 Score: 39.2762 bits (90), Expect = 4.025e-27
Identity = 23/47 (48.94%), Postives = 28/47 (59.57%), Query Frame = 3
Query:  717 NTGVTFDDFARI*LSKQDSLEVVGFLKKPRDVRNWGA-YQKGGLLVG 854
            NTG+TF+D A +  +KQD  E+V FLK P      GA   KG LL G
Sbjct:  218 NTGITFEDVAGVDEAKQDFEEIVEFLKTPEKFSALGAKIPKGVLLTG 264          
BLAST of EY740959 vs. ExPASy Swiss-Prot
Match: FTSH_PORPU (Cell division protease ftsH homolog OS=Porphyra purpurea GN=ftsH PE=3 SV=1)

HSP 1 Score: 98.2117 bits (243), Expect = 6.177e-20
Identity = 52/97 (53.61%), Postives = 66/97 (68.04%), Query Frame = 2
Query:  317 VSSSRMSYSRFLEYLDKDRVKKVDLFENGTIAIVEAISPELGNRVQRVRVQLPGLSQELLQKFGEKNIDFAAHNAQEDS------GSLLFNLIWESG 589
            ++SSRM+Y RFLEYLD   VK+VDL+EN   AIVEA+ PELGNRVQR+RV+LP  + EL+ K  + N+D  AH  +  S      G+LLF LI   G
Sbjct:   38 IASSRMTYGRFLEYLDMGWVKRVDLYENNHTAIVEAVGPELGNRVQRIRVELPASAPELITKLRKANVDLDAHPPKSTSAVWGLLGNLLFPLILVGG 134          
BLAST of EY740959 vs. ExPASy Swiss-Prot
Match: FTSH_GUITH (Cell division protease ftsH homolog OS=Guillardia theta GN=ftsH PE=3 SV=1)

HSP 1 Score: 97.4413 bits (241), Expect = 1.054e-19
Identity = 50/92 (54.35%), Postives = 66/92 (71.74%), Query Frame = 2
Query:  311 QGVSSSRMSYSRFLEYLDKDRVKKVDLFENGTIAIVEAISPELGNRVQRVRVQLPGLSQELLQKFGEKNIDFAAH--NAQEDSGSLLFNLIW 580
            + ++SSRM+Y RFLEYLD   VKKVDL++ G  AIVEAI PELGNR+QR+RV+LP  + EL+ K  + N+D  AH  N    + SL+ NLI+
Sbjct:   36 KNIASSRMTYGRFLEYLDLGWVKKVDLYDEGHTAIVEAIGPELGNRIQRIRVELPATAPELITKLRKANVDLDAHATNDSTPAWSLIGNLIF 127          
BLAST of EY740959 vs. ExPASy Swiss-Prot
Match: FSTH_PORYE (Cell division protease ftsH homolog OS=Porphyra yezoensis GN=ftsH PE=3 SV=1)

HSP 1 Score: 97.4413 bits (241), Expect = 1.054e-19
Identity = 51/97 (52.58%), Postives = 66/97 (68.04%), Query Frame = 2
Query:  317 VSSSRMSYSRFLEYLDKDRVKKVDLFENGTIAIVEAISPELGNRVQRVRVQLPGLSQELLQKFGEKNIDFAAHNAQEDS------GSLLFNLIWESG 589
            ++SSRM+Y RFLEYLD   VK+VDL+EN   AIVEA+ PELGNRVQR+RV+LP  + EL+ K  + N+D  AH  +  S      G+LLF L+   G
Sbjct:   38 IASSRMTYGRFLEYLDMGWVKRVDLYENNHTAIVEAVGPELGNRVQRIRVELPASAPELITKLRKANVDLDAHPPKSTSAVWGLLGNLLFPLLLVGG 134          
BLAST of EY740959 vs. ExPASy Swiss-Prot
Match: FTSH_ODOSI (Cell division protease ftsH homolog OS=Odontella sinensis GN=ftsH PE=3 SV=1)

HSP 1 Score: 84.7297 bits (208), Expect = 7.067e-16
Identity = 42/77 (54.55%), Postives = 57/77 (74.03%), Query Frame = 2
Query:  317 VSSSRMSYSRFLEYLDKDRVKKVDLFENGTIAIVEAISPELGNRVQRVRVQLPGLSQELLQKFGEKNIDFAAHNAQE 547
            V SS+M+Y RFLEYL+   V +VDL++N   AIV+A SPELGNR Q +RV++P  + +L+QK  E NIDF AH A++
Sbjct:   50 VISSKMTYGRFLEYLEMGWVNQVDLYDNSRNAIVQASSPELGNRPQTIRVEIPVGASQLIQKLKEYNIDFDAHPAEQ 126          
BLAST of EY740959 vs. ExPASy Swiss-Prot
Match: FTSH_CYACA (Cell division protease ftsH homolog OS=Cyanidium caldarium GN=ftsH PE=3 SV=1)

HSP 1 Score: 80.4925 bits (197), Expect = 1.333e-14
Identity = 44/88 (50.00%), Postives = 58/88 (65.91%), Query Frame = 2
Query:  320 SSSRMSYSRFLEYLDKDRVKKVDLFENGTIAIVEAISPELGNRVQRVRVQLPGLSQELLQKFGEKNIDFAAHNAQEDSG--SLLFNLI 577
            SSSRM+Y RFLEY+D + VKKVDL++N   AIV+ I+P++    Q VRV+LP  S EL+ K   K IDF AH +  +    S L NL+
Sbjct:   37 SSSRMTYGRFLEYIDMNWVKKVDLYDNARTAIVDIINPDIKGEEQLVRVELPTFSSELVSKLKNKLIDFDAHPSSSNVNLVSWLSNLL 124          
The following BLAST results are available for this feature:
BLAST of EY740959 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 10
Match NameE-valueIdentityDescription
FTSH2_ARATH1.120e-6972.87Cell division protease ftsH homolog 2, chloroplast... [more]
FTSH8_ARATH3.223e-6666.49Cell division protease ftsH homolog 8, chloroplast... [more]
FTSH2_ORYSJ5.391e-6069.41Cell division protease ftsH homolog 2, chloroplast... [more]
FTSH6_ORYSJ2.059e-2939.04Cell division protease ftsH homolog 6, chloroplast... [more]
FTSH6_ARATH4.025e-2737.95Cell division protease ftsH homolog 6, chloroplast... [more]
FTSH_PORPU6.177e-2053.61Cell division protease ftsH homolog OS=Porphyra pu... [more]
FTSH_GUITH1.054e-1954.35Cell division protease ftsH homolog OS=Guillardia ... [more]
FSTH_PORYE1.054e-1952.58Cell division protease ftsH homolog OS=Porphyra ye... [more]
FTSH_ODOSI7.067e-1654.55Cell division protease ftsH homolog OS=Odontella s... [more]
FTSH_CYACA1.333e-1450.00Cell division protease ftsH homolog OS=Cyanidium c... [more]
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Properties
Property NameValue
Genbank descriptionCS00-C3-705-078-H11-CT.F Sweet orange fruit, development stadium (6 of 6) Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY740959 ID=EY740959; Name=EY740959; organism=Citrus sinensis; type=EST; length=855bp
CACGCGTCCGCCCACGCGTCCGCCCACGCGTCCGCTTTCTTTCAAGATGG
CAGCTTCATCAGCTTGCCTTGTAGGGAATATTTTGACAACACACAAGACT
AAAACAAATTTGAGCAAGGACTTCCATGGTAGGCATCTTCTGTTTAACTC
GAGTTTTCGATCATTGGAAAAGAAGCCAAAAGTAGCCGTTGTAAAGGCAT
CTTTGAGCCAGAAGCAGCATGAAGGAAGAAGAGGGTTTCTTAAGAAGCTG
CTTGGAAATGTTGGAGTTGGTACTGCTTTGTTGGGGAGTGGGAAAGCCTA
TGCCGATGAACAGGGGGTTTCTTCCTCTAGGATGTCTTACTCTAGGTTCT
TGGAGTATCTTGATAAGGACAGGGTGAAGAAGGTTGATTTGTTTGAGAAT
GGTACCATAGCTATTGTGGAGGCTATTTCCCCTGAGTTGGGTAACCGGGT
GCAACGAGTTCGCGTTCAACTTCCAGGTCTAAGTCAGGAGCTTCTCCAGA
AATTCGGGGAGAAGAACATTGATTTTGCTGCCCATAATGCTCAAGAGGAC
TCAGGATCATTGTTGTTTAACTTGATTTGGGAATCTGGCTTTCCCACTTA
TCTTAATTGGAGGGCTGTTCCTTCTCTCAAGGCGTTCATCTGGTGGAATG
GGCGGTCCTGGTGGGCCTGGTTCCCCCTTGGCTTTGGTCANTCCAAGCTA
AATTCCAGATGGAACAAATACGGGTGTGACATTTGATGATTTTGCCCGGA
TTTGATTAAGCAAACAAGATTCCCTGGAGGTGGTGGGATTCCTTAAGAAG
CCGAGAGATGTGCGCAATTGGGGCGCCTATCAAAAGGGTGGTCTTCTCGT
TGGTC
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