EY740944

Overview
NameEY740944
Unique NameEY740944
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length597
Libraries
Library NameType
Sweet orange fruit, development stadium (6 of 6)cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of EY740944 vs. ExPASy Swiss-Prot
Match: ZNUC_PSEF5 (Zinc import ATP-binding protein znuC OS=Pseudomonas fluorescens (strain Pf-5 / ATCC BAA-477) GN=znuC PE=3 SV=1)

HSP 1 Score: 184.496 bits (467), Expect = 3.466e-46
Identity = 87/107 (81.31%), Postives = 92/107 (85.98%), Query Frame = 3
Query:    3 AGQAELYSLITRLRDRHGCGVLMVSHDLHLVMSTTDQVVCLNRHVCCSGHPEQVSGDPAFVELFGKNAQSLAIYXXXXXXXXXXXGAVVSDPATPHTHVHGDSCKHG 323
            AGQAELYSLITRLRDRHGCGVLMVSHDLHLVMSTTDQVVCLNRHVCCSGHPEQVSGDPAFVELFGKNA SLAIY           G+VV+ PA+ H HVHG++CKHG
Sbjct:  155 AGQAELYSLITRLRDRHGCGVLMVSHDLHLVMSTTDQVVCLNRHVCCSGHPEQVSGDPAFVELFGKNAPSLAIYHHHHDHAHDLHGSVVTQPASGHAHVHGENCKHG 261          
BLAST of EY740944 vs. ExPASy Swiss-Prot
Match: ZNUC_PSESM (Zinc import ATP-binding protein znuC OS=Pseudomonas syringae pv. tomato GN=znuC PE=3 SV=1)

HSP 1 Score: 183.341 bits (464), Expect = 7.721e-46
Identity = 91/110 (82.73%), Postives = 92/110 (83.64%), Query Frame = 3
Query:    3 AGQAELYSLITRLRDRHGCGVLMVSHDLHLVMSTTDQVVCLNRHVCCSGHPEQVSGDPAFVELFGKNAQSLAIYXXXXXXXXXXXGAVVSDPAT---PHTHVHGDSCKHG 323
            AGQAELYSLITRLRDRH CGVLMVSHDLHLVMSTTDQVVCLNRHVCCSGHPEQVS DPAFVELFGKNAQSLAIY           GAVV+D  T   PHTHVHGDSCKHG
Sbjct:  155 AGQAELYSLITRLRDRHQCGVLMVSHDLHLVMSTTDQVVCLNRHVCCSGHPEQVSHDPAFVELFGKNAQSLAIYHHHHDHAHDLHGAVVNDAPTASPPHTHVHGDSCKHG 264          
BLAST of EY740944 vs. ExPASy Swiss-Prot
Match: ZNUC_PSEPF (Zinc import ATP-binding protein znuC OS=Pseudomonas fluorescens (strain Pf0-1) GN=znuC PE=3 SV=1)

HSP 1 Score: 181.03 bits (458), Expect = 3.832e-45
Identity = 87/107 (81.31%), Postives = 88/107 (82.24%), Query Frame = 3
Query:    3 AGQAELYSLITRLRDRHGCGVLMVSHDLHLVMSTTDQVVCLNRHVCCSGHPEQVSGDPAFVELFGKNAQSLAIYXXXXXXXXXXXGAVVSDPATPHTHVHGDSCKHG 323
            AGQAELYSLITRLRDRHGCGVLMVSHDLHLVMSTTDQVVCLNRHVCCSGHPEQVSGDPAFVELFG NA SLAIY           G+VV  P T   HVHGDSCKHG
Sbjct:  155 AGQAELYSLITRLRDRHGCGVLMVSHDLHLVMSTTDQVVCLNRHVCCSGHPEQVSGDPAFVELFGNNAPSLAIYHHHHDHAHDLHGSVVKGPVTGQPHVHGDSCKHG 261          
BLAST of EY740944 vs. ExPASy Swiss-Prot
Match: ZNUC_PSEU2 (Zinc import ATP-binding protein znuC OS=Pseudomonas syringae pv. syringae (strain B728a) GN=znuC PE=3 SV=1)

HSP 1 Score: 180.644 bits (457), Expect = 5.005e-45
Identity = 90/108 (83.33%), Postives = 91/108 (84.26%), Query Frame = 3
Query:    3 AGQAELYSLITRLRDRHGCGVLMVSHDLHLVMSTTDQVVCLNRHVCCSGHPEQVSGDPAFVELFGKNAQSLAIYXXXXXXXXXXXGAVVSDPA-TPHTHVHGDSCKHG 323
            AGQAELYSLITRLRDRH CGVLMVSHDLHLVMSTTDQVVCLNRHVCCSGHPEQVS DPAFVELFGKNAQSLAIY           GAVV+D A   HTHVHGDSCKHG
Sbjct:  155 AGQAELYSLITRLRDRHRCGVLMVSHDLHLVMSTTDQVVCLNRHVCCSGHPEQVSHDPAFVELFGKNAQSLAIYHHHHDHAHDLHGAVVNDAAPLSHTHVHGDSCKHG 262          
BLAST of EY740944 vs. ExPASy Swiss-Prot
Match: ZNUC_PSE14 (Zinc import ATP-binding protein znuC OS=Pseudomonas syringae pv. phaseolicola (strain 1448A / Race 6) GN=znuC PE=3 SV=1)

HSP 1 Score: 175.252 bits (443), Expect = 2.103e-43
Identity = 89/111 (80.18%), Postives = 90/111 (81.08%), Query Frame = 3
Query:    3 AGQAELYSLITRLRDRHGCGVLMVSHDLHLVMSTTDQVVCLNRHVCCSGHPEQVSGDPAFVELFGKNAQSLAIYXXXXXXXXXXXGAVVSD-PAT---PHTHVHGDSCKHG 323
            AGQAELY LITRLRDRH CGVLMVSHDLHLVMSTTDQVVCLNRHVCCSGHPE VS DPAFVELFGKNAQSLAIY           GAVV+D PAT    HTHVHGD CKHG
Sbjct:  155 AGQAELYGLITRLRDRHQCGVLMVSHDLHLVMSTTDQVVCLNRHVCCSGHPEHVSHDPAFVELFGKNAQSLAIYHHHHDHAHDLHGAVVNDAPATSSHTHTHVHGDHCKHG 265          
BLAST of EY740944 vs. ExPASy Swiss-Prot
Match: ZNUC_PSEPK (Zinc import ATP-binding protein znuC OS=Pseudomonas putida (strain KT2440) GN=znuC PE=3 SV=1)

HSP 1 Score: 166.392 bits (420), Expect = 9.767e-41
Identity = 81/106 (76.42%), Postives = 85/106 (80.19%), Query Frame = 3
Query:    6 GQAELYSLITRLRDRHGCGVLMVSHDLHLVMSTTDQVVCLNRHVCCSGHPEQVSGDPAFVELFGKNAQSLAIYXXXXXXXXXXXGAVVSDPATPHTHVHGDSCKHG 323
            GQ ELY+LITRLRDRHGCGVLMVSHDLHLVMS TDQVVCLNRHVCCSGHPEQVSGDPAFVELFGK A SLAIY           G+VV+    P THVHG+ CKHG
Sbjct:  156 GQTELYNLITRLRDRHGCGVLMVSHDLHLVMSATDQVVCLNRHVCCSGHPEQVSGDPAFVELFGKTAPSLAIYHHHHDHSHDLHGSVVA----PGTHVHGEHCKHG 257          
BLAST of EY740944 vs. ExPASy Swiss-Prot
Match: ZNUC_PSEE4 (Zinc import ATP-binding protein znuC OS=Pseudomonas entomophila (strain L48) GN=znuC PE=3 SV=1)

HSP 1 Score: 162.925 bits (411), Expect = 1.080e-39
Identity = 77/106 (72.64%), Postives = 85/106 (80.19%), Query Frame = 3
Query:    6 GQAELYSLITRLRDRHGCGVLMVSHDLHLVMSTTDQVVCLNRHVCCSGHPEQVSGDPAFVELFGKNAQSLAIYXXXXXXXXXXXGAVVSDPATPHTHVHGDSCKHG 323
            GQ ELY+LITRLRDRHGCGVLMVSHDLHLVMS TDQVVCLNRHVCCSGHPEQVS DPAFVELFG+NA+SLA+Y           G+V++    P  HVHG+ CKHG
Sbjct:  156 GQTELYNLITRLRDRHGCGVLMVSHDLHLVMSATDQVVCLNRHVCCSGHPEQVSNDPAFVELFGQNAKSLAVYHHHHDHSHDLHGSVIA----PGAHVHGEHCKHG 257          
BLAST of EY740944 vs. ExPASy Swiss-Prot
Match: ZNUC_PSEAE (Zinc import ATP-binding protein znuC OS=Pseudomonas aeruginosa GN=znuC PE=3 SV=1)

HSP 1 Score: 151.369 bits (381), Expect = 3.252e-36
Identity = 78/115 (67.83%), Postives = 83/115 (72.17%), Query Frame = 3
Query:    3 AGQAELYSLITRLRDRHGCGVLMVSHDLHLVMSTTDQVVCLNRHVCCSGHPEQVSGDPAFVELFGKNAQSLAIYXXXXXXXXXXXGAVVS------DPATPHT--HVHGDSCKHG 323
            AGQAELY LI +LRDR+GCGVLMVSHDLHLVMS TDQVVCLNRHVCCSGHPEQVSGDPAFVELFG++A+SLAIY           G VV        P T  T  H HG  C HG
Sbjct:  155 AGQAELYRLIGKLRDRYGCGVLMVSHDLHLVMSATDQVVCLNRHVCCSGHPEQVSGDPAFVELFGQDARSLAIYHHHHDHAHDLHGEVVKAGPGALPPGTRFTPVHKHGPDCNHG 269          
BLAST of EY740944 vs. ExPASy Swiss-Prot
Match: ZNUC_PSEAB (Zinc import ATP-binding protein znuC OS=Pseudomonas aeruginosa (strain UCBPP-PA14) GN=znuC PE=3 SV=1)

HSP 1 Score: 151.369 bits (381), Expect = 3.252e-36
Identity = 78/115 (67.83%), Postives = 83/115 (72.17%), Query Frame = 3
Query:    3 AGQAELYSLITRLRDRHGCGVLMVSHDLHLVMSTTDQVVCLNRHVCCSGHPEQVSGDPAFVELFGKNAQSLAIYXXXXXXXXXXXGAVVS------DPATPHT--HVHGDSCKHG 323
            AGQAELY LI +LRDR+GCGVLMVSHDLHLVMS TDQVVCLNRHVCCSGHPEQVSGDPAFVELFG++A+SLAIY           G VV        P T  T  H HG  C HG
Sbjct:  155 AGQAELYRLIGKLRDRYGCGVLMVSHDLHLVMSATDQVVCLNRHVCCSGHPEQVSGDPAFVELFGQDARSLAIYHHHHDHAHDLHGEVVKAGPGALPPGTRFTPVHKHGPDCNHG 269          
BLAST of EY740944 vs. ExPASy Swiss-Prot
Match: ZNUC_MAGSA (Zinc import ATP-binding protein znuC OS=Magnetospirillum magneticum (strain AMB-1 / ATCC 700264) GN=znuC PE=3 SV=1)

HSP 1 Score: 115.546 bits (288), Expect = 1.977e-25
Identity = 62/111 (55.86%), Postives = 71/111 (63.96%), Query Frame = 3
Query:    3 AGQAELYSLITRLRDRHGCGVLMVSHDLHLVMSTTDQVVCLNRHVCCSGHPEQVSGDPAFVELFG-KNAQSLAIYXXXXXXXXXXXGAVV---SDPATPHTHVHGDSCKHG 323
            AGQAELY LIT     HG GVLMVSHDLH+VM+ TD VVCLNRHVCC+GHPE VS  P ++ LFG + A SLAIY           G+V+        PHT  HG  C+HG
Sbjct:  154 AGQAELYDLITGQAREHGVGVLMVSHDLHVVMAATDHVVCLNRHVCCAGHPETVSRHPEYLALFGPRVAASLAIYTHAHDHGHGADGSVLPLAEGGGEPHT--HGPGCRHG 262          
The following BLAST results are available for this feature:
BLAST of EY740944 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 77
Match NameE-valueIdentityDescription
ZNUC_PSEF53.466e-4681.31Zinc import ATP-binding protein znuC OS=Pseudomona... [more]
ZNUC_PSESM7.721e-4682.73Zinc import ATP-binding protein znuC OS=Pseudomona... [more]
ZNUC_PSEPF3.832e-4581.31Zinc import ATP-binding protein znuC OS=Pseudomona... [more]
ZNUC_PSEU25.005e-4583.33Zinc import ATP-binding protein znuC OS=Pseudomona... [more]
ZNUC_PSE142.103e-4380.18Zinc import ATP-binding protein znuC OS=Pseudomona... [more]
ZNUC_PSEPK9.767e-4176.42Zinc import ATP-binding protein znuC OS=Pseudomona... [more]
ZNUC_PSEE41.080e-3972.64Zinc import ATP-binding protein znuC OS=Pseudomona... [more]
ZNUC_PSEAE3.252e-3667.83Zinc import ATP-binding protein znuC OS=Pseudomona... [more]
ZNUC_PSEAB3.252e-3667.83Zinc import ATP-binding protein znuC OS=Pseudomona... [more]
ZNUC_MAGSA1.977e-2555.86Zinc import ATP-binding protein znuC OS=Magnetospi... [more]

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Properties
Property NameValue
Genbank descriptionCS00-C3-705-078-G08-CT.F Sweet orange fruit, development stadium (6 of 6) Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY740944 ID=EY740944; Name=EY740944; organism=Citrus sinensis; type=EST; length=597bp
TGGCCGGCCAGGCCGAGTTGTACAGCCTGATCACCCGCCTGCGGGACCGC
CATGGCTGCGGCGTGCTGATGGTCTCCCACGACCTGCACCTGGTGATGAG
CACCACCGACCAGGTGGTGTGCCTTAATCGCCACGTGTGCTGCTCCGGCC
ACCCGGAACAGGTCAGCGGCGACCCGGCTTTCGTCGAGCTGTTCGGCAAG
AACGCCCAGAGCCTGGCGATTTATCACCACCATCACGACCATGCCCATGA
CCTGCATGGCGCTGTTGTCTCTGACCCCGCCACACCCCATACCCACGTTC
ATGGAGATAGCTGCAAGCATGGCTGATTTTCTGCTCTACGCCCTGCTGGC
AGGCTTGGCTCTGGCGCTGGTGGCGGGTCCACTGGGCTCGTTCGTGGTCT
GGCGGCGCATGGCCTATTTTGGCGACACCTTGTCCCACGCTGCGCTGCTG
GGCGTGGCCATGGGCTTTCTGCTGGATGTGAGCCCGACCATTGCCGTCAC
AGTCGGCTGCCTGTTGCTGGCGGTGCTGCTGGTGACCCTGCAACAGCGCC
AGCCGCTGGCTTCCGATACGCTGCTGGGCATCCTGGCCCCAAGCACC
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