EG358383

Overview
NameEG358383
Unique NameEG358383
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length604
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig9763 contig Csv1_Contig9763:472..1075. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of EG358383 vs. ExPASy Swiss-Prot
Match: MTF1_PEA (MADS-box transcription factor 1 OS=Pisum sativum GN=MTF1 PE=2 SV=1)

HSP 1 Score: 115.161 bits (287), Expect = 2.642e-25
Identity = 64/112 (57.14%), Postives = 71/112 (63.39%), Query Frame = 3
Query:    3 MLDTLTELQHKEQLLSEANKTLKQRTMTLRHADFAGLQLMEGYQVNTLQLNPSAEDCGYGLK-PAQPQGDTFFHA--LECEPTLQIGYQPADPISVVTAGPSLNNYMQGWLP 329
            MLD L +LQ KE LL EAN+ L+QR              MEGYQ+N+LQLN SAED GYG        GD  F    +ECEPTLQIGY   DP SVVTAGPS+NNYM GWLP
Sbjct:  150 MLDQLGDLQRKEHLLCEANRALRQR--------------MEGYQINSLQLNLSAEDMGYGRHHQGHTHGDELFQVQPIECEPTLQIGYHQGDPGSVVTAGPSMNNYMGGWLP 247          
BLAST of EG358383 vs. ExPASy Swiss-Prot
Match: AGL9_PETHY (Agamous-like MADS-box protein AGL9 homolog OS=Petunia hybrida GN=FBP2 PE=1 SV=2)

HSP 1 Score: 114.775 bits (286), Expect = 3.450e-25
Identity = 64/109 (58.72%), Postives = 73/109 (66.97%), Query Frame = 3
Query:    3 MLDTLTELQHKEQLLSEANKTLKQRTMTLRHADFAGLQLMEGYQVNTLQLNPSAEDCGYGLKPAQPQGDTFFHALECEPTLQIGYQPADPISVVTAGPSLNNYMQGWLP 329
            MLD L +LQ KE  L+EAN+TLKQR             LMEG  +N LQ   +A+D GYG +  Q QGD FFH LECEPTLQIGYQ  DPI+V  AGPS+NNYM GWLP
Sbjct:  148 MLDQLQDLQRKEHALNEANRTLKQR-------------LMEGSTLN-LQWQQNAQDVGYGRQATQTQGDGFFHPLECEPTLQIGYQ-NDPITVGGAGPSVNNYMAGWLP 241          
BLAST of EG358383 vs. ExPASy Swiss-Prot
Match: SEP3_ARATH (Developmental protein SEPALLATA 3 OS=Arabidopsis thaliana GN=SEP3 PE=1 SV=1)

HSP 1 Score: 85.1149 bits (209), Expect = 2.927e-16
Identity = 54/112 (48.21%), Postives = 66/112 (58.93%), Query Frame = 3
Query:    3 MLDTLTELQHKEQLLSEANKTLKQRTMTLRHADFAGLQLMEGYQVNTLQLNPSAEDCG-YGLKPAQPQ--GDTFFHALECEPTLQIGYQPADPISVVTAGPSLNNYMQGWLP 329
            MLD L +LQ KE++L+E NKTL+             L+L +GYQ+  LQLNP+ E+   YG    Q Q     FF  LECEP LQIGYQ       + AGPS+NNYM GWLP
Sbjct:  150 MLDQLNDLQSKERMLTETNKTLR-------------LRLADGYQM-PLQLNPNQEEVDHYGRHHHQQQQHSQAFFQPLECEPILQIGYQGQQ--DGMGAGPSVNNYMLGWLP 245          
BLAST of EG358383 vs. ExPASy Swiss-Prot
Match: AGL9_SINAL (Agamous-like MADS-box protein AGL9 homolog OS=Sinapis alba GN=AGL9 PE=2 SV=1)

HSP 1 Score: 84.3445 bits (207), Expect = 4.994e-16
Identity = 54/114 (47.37%), Postives = 67/114 (58.77%), Query Frame = 3
Query:    3 MLDTLTELQHKEQLLSEANKTLKQRTMTLRHADFAGLQLMEGYQVNTLQLNPSAED--CGYGLKPAQPQGDT---FFHALECEPTLQIGYQPADPISVVTAGPSLNNYMQGWLP 329
            MLD L +LQ KE++L+E NKTL+             L+L +GYQ+  LQLNP+ ED    YG    Q Q ++   FF  LECEP LQ+GYQ       + AGPS NNYM GWLP
Sbjct:  150 MLDQLNDLQSKERMLNETNKTLR-------------LRLADGYQM-PLQLNPNQEDHHVDYGRHDQQQQQNSHHAFFQPLECEPILQMGYQGQQDHG-MEAGPSENNYMLGWLP 248          
BLAST of EG358383 vs. ExPASy Swiss-Prot
Match: AGL9_ARADE (Agamous-like MADS-box protein AGL9 homolog OS=Aranda deborah PE=2 SV=1)

HSP 1 Score: 83.5741 bits (205), Expect = 8.518e-16
Identity = 52/111 (46.85%), Postives = 65/111 (58.56%), Query Frame = 3
Query:    3 MLDTLTELQHKEQLLSEANKTLKQRTMTLRHADFAGLQLMEGYQVNTLQL-NPS-AEDCGYGLKPAQPQGDTFFHALECEPTLQIGYQPADPISVVTAGPSLNNYM-QGWL 326
            MLD L +LQ +EQ+L EANKTLK+R               E  Q N  Q+ +PS     GYG +PAQ  G+ F+H LECEPTLQIGY     ++  TA  ++NNYM  GWL
Sbjct:  146 MLDQLADLQRREQMLCEANKTLKRR-------------FEESSQANQQQVWDPSNTHAVGYGRQPAQHHGEAFYHPLECEPTLQIGYHSDITMATATAS-TVNNYMPPGWL 242          
The following BLAST results are available for this feature:
BLAST of EG358383 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 5
Match NameE-valueIdentityDescription
MTF1_PEA2.642e-2557.14MADS-box transcription factor 1 OS=Pisum sativum G... [more]
AGL9_PETHY3.450e-2558.72Agamous-like MADS-box protein AGL9 homolog OS=Petu... [more]
SEP3_ARATH2.927e-1648.21Developmental protein SEPALLATA 3 OS=Arabidopsis t... [more]
AGL9_SINAL4.994e-1647.37Agamous-like MADS-box protein AGL9 homolog OS=Sina... [more]
AGL9_ARADE8.518e-1646.85Agamous-like MADS-box protein AGL9 homolog OS=Aran... [more]
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Properties
Property NameValue
Genbank description3a9 Citrus sinensis flesh suppression subtractive hybridization (SSH) cDNA library Blonde cadenera cultivar Citrus sinensis cDNA clone Cl0003a9, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EG358383 ID=EG358383; Name=EG358383; organism=Citrus sinensis; type=EST; length=604bp
ACATGCTGGATACCCTTACTGAACTGCAACATAAGGAACAGTTGCTGAGC
GAAGCAAATAAGACCCTCAAACAAAGGACGATGACGCTAAGGCACGCCGA
TTTTGCTGGTTTGCAGTTGATGGAGGGATACCAAGTGAACACACTTCAAT
TGAATCCTAGTGCAGAAGATTGTGGTTATGGGCTTAAACCAGCTCAACCT
CAGGGCGATACCTTCTTTCACGCCTTGGAATGTGAACCCACATTGCAAAT
TGGATACCAGCCTGCGGACCCAATATCGGTTGTCACAGCAGGCCCGAGTC
TGAATAATTACATGCAAGGATGGCTACCATGCTAAGAGAGCGGCGGGCAT
TACCAGTCAATGTATTGCAGTTGATCCATAAGAATCAGCAACTTTGTATC
CCTTTGTAAGCAACCCTATTCAGTGACTAGGAACACGCAATCATAAGGAT
TTATTATAATAACTCTACAGTGATCCTGCACTTTAGGGAAACTGATGACG
ATATATAGCTATGTTGTGTGTGCGTGTATTTTCAATCACCGCGCTTATCT
TTATTTAACAAAGCCTTGTTTGAGAATAAAAAAAAAAAAAAAAAAAAAAA
AAAG
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