EG358382

Overview
NameEG358382
Unique NameEG358382
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length640
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig323 contig Csv1_Contig323:16..655. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
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BLAST of EG358382 vs. ExPASy Swiss-Prot
Match: Y5486_ARATH (Uncharacterized protein At5g64816 OS=Arabidopsis thaliana GN=At5g64816 PE=2 SV=1)

HSP 1 Score: 218.779 bits (556), Expect = 1.917e-56
Identity = 100/127 (78.74%), Postives = 116/127 (91.34%), Query Frame = 1 
Query:  142 MVDPWWSLLGAAIPAVIMGQALRMKKRRAEEQRLKSARGREKSSDDIFVCERVCTSKRMLKKVGSLSKEPTIDTCVTVCGVSQIDACADACARTVCVNQHQVPNWNDICLRKCQSECLRLSNSSVMS 522
            MV+ WWSL+GAA+PA+I GQA R+KKR  EE+R+KSARGREKSSD+IFVCERVCTSKRMLKKVG+ SK+P  DTCVTVCGVS++DAC+DACARTVCVNQHQV NWNDICLR+CQSECL+LS+SS  S
Sbjct:    1 MVEVWWSLIGAAVPALIAGQAWRIKKRHGEEERIKSARGREKSSDEIFVCERVCTSKRMLKKVGAFSKDPIPDTCVTVCGVSELDACSDACARTVCVNQHQVANWNDICLRRCQSECLKLSSSSSSS 127
The following BLAST results are available for this feature:
BLAST of EG358382 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 1
Match NameE-valueIdentityDescription
Y5486_ARATH1.917e-5678.74Uncharacterized protein At5g64816 OS=Arabidopsis t... [more]
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Properties
Property NameValue
Genbank description11d2 Citrus sinensis flesh suppression subtractive hybridization (SSH) cDNA library Blonde cadenera cultivar Citrus sinensis cDNA clone Cl0011d2, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EG358382 ID=EG358382; Name=EG358382; organism=Citrus sinensis; type=EST; length=640bp
ACGCGGGGCCTTGAAACTCAAAACCCCAATTTGCAAAACTCCTTTAGCTG
TTCTTTCCGTGTCCTCTCCGGTCGATAAGCTCCGTTCCGCCATCGCCATC
GCCATCGCCGAGATCATTAAGCCCCGTCTCCCACTGAAGTCATGGTGGAT
CCATGGTGGTCACTATTAGGCGCAGCTATACCAGCTGTAATCATGGGACA
AGCTCTGAGGATGAAGAAAAGGAGAGCGGAAGAACAGAGGCTGAAGAGTG
CAAGAGGGCGTGAGAAGAGCTCTGATGATATCTTTGTATGCGAGAGGGTG
TGCACTTCAAAGAGGATGCTAAAGAAGGTTGGTTCATTATCTAAAGAGCC
GACCATTGACACTTGTGTCACTGTTTGTGGTGTTTCTCAGATTGATGCTT
GTGCTGATGCATGTGCAAGAACTGTTTGTGTCAATCAACACCAAGTCCCC
AATTGGAATGATATATGTCTTAGGAAGTGCCAAAGTGAGTGCCTTAGGTT
ATCAAATTCCTCTGTCATGTCATAATAGCATTGTCTTCATGTTGCCCTAT
CTACTATTTGGCTGGAATTTTTAAAACTAGTTTCTTGCAATATACATTTA
ATTTAGTGAAAAAAAAAAAAAAAAAAAAAAAAAAAAAGTA
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