EG358381

Overview
NameEG358381
Unique NameEG358381
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length690
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
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BLAST of EG358381 vs. ExPASy Swiss-Prot
Match: C72A1_CATRO (Secologanin synthase OS=Catharanthus roseus GN=CYP72A1 PE=2 SV=1)

HSP 1 Score: 175.637 bits (444), Expect = 2.147e-43
Identity = 82/176 (46.59%), Postives = 120/176 (68.18%), Query Frame = 1 
Query:   25 QCEMELPLKSIAVTIVILTVLTWAWRVLNWVWLRPKKLEKFLRQQGLKGNSYRLLFGDLKENSIELKEAKARPLSLDDNIAIRVNPFLHKLVNDYGKNSFMWFGPTPRVNIMNPDQIKAIFTKINDFQKVNSI--PLARLLIVGLASLEGEKWAKHRKLINPAFHQEKLKLMLPAF 546
            + +M+   K+IA TI  L V+ WAWRVL+W W  PK++EK LRQQG +GN YR L GD+KE+    +EA ++P+  +++I  R+ P ++  +N YG+NSF W G  PR+++M P+ IK + T  + +QK   +  PL + L+ G+ S EG KW+KHR++I+PAF  EKLK MLPAF
Sbjct:    2 EMDMDTIRKAIAATIFAL-VMAWAWRVLDWAWFTPKRIEKRLRQQGFRGNPYRFLVGDVKESGKMHQEALSKPMEFNNDIVPRLMPHINHTINTYGRNSFTWMGRIPRIHVMEPELIKEVLTHSSKYQKNFDVHNPLVKFLLTGVGSFEGAKWSKHRRIISPAFTLEKLKSMLPAF 176
The following BLAST results are available for this feature:
BLAST of EG358381 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 1
Match NameE-valueIdentityDescription
C72A1_CATRO2.147e-4346.59Secologanin synthase OS=Catharanthus roseus GN=CYP... [more]
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Properties
Property NameValue
Genbank description5h5 Citrus sinensis flesh suppression subtractive hybridization (SSH) cDNA library Blonde cadenera cultivar Citrus sinensis cDNA clone Cl0005h5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EG358381 ID=EG358381; Name=EG358381; organism=Citrus sinensis; type=EST; length=690bp
ACGCGGGAAACCCGCAAAATCTGTCAGTGTGAAATGGAGTTGCCTCTGAA
ATCCATAGCTGTTACCATTGTTATTCTAACGGTGCTAACATGGGCATGGA
GAGTGCTGAACTGGGTGTGGCTGAGGCCCAAGAAGCTGGAGAAATTCCTG
AGACAGCAAGGTTTAAAAGGCAATTCTTACAGGCTTCTGTTTGGTGACTT
GAAAGAAAATTCCATCGAGCTGAAGGAAGCCAAAGCCAGACCCCTCAGTT
TGGATGACAATATTGCTATTCGTGTCAATCCATTCCTTCATAAACTGGTA
AATGATTATGGTAAGAATTCTTTCATGTGGTTTGGTCCGACACCAAGGGT
GAATATTATGAATCCTGATCAAATAAAAGCGATATTTACCAAGATCAATG
ATTTTCAAAAAGTCAATTCAATCCCACTTGCCAGGCTGCTGATAGTTGGA
TTGGCTAGCCTTGAGGGGGAGAAGTGGGCTAAACATAGAAAACTCATCAA
CCCAGCCTTCCACCAAGAGAAGCTCAAGCTTATGTTGCCAGCATTCTACT
TGAGTTGTACTACAAAAGCAGCAACTCTCCCCGGCCCGTTCTCTACTTCA
CTTCATATGACTGGTTTAACGCCCGAGATGTCTCTTTACAGAATGTAACA
TTCAACTCCCGCCCGGAAACTGATGAAGCGGTTGCTTTTG
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