FC871807
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of FC871807 vs. ExPASy Swiss-Prot
Match: LOXC2_ORYSJ (Probable lipoxygenase 8, chloroplastic OS=Oryza sativa subsp. japonica GN=CM-LOX2 PE=2 SV=1) HSP 1 Score: 154.836 bits (390), Expect = 1.553e-37 Identity = 81/150 (54.00%), Postives = 104/150 (69.33%), Query Frame = 3 Query: 21 GYPDKKPELTRPVLGG-KQNPYPRRCRTGRPRCDTDQFSEKREGNFYVPRDEAFSEVKQLTFSAKTVYSVLHALVPSLETAFVDP---DLGFPYFSAIDALFNEGVNLPPLKQEGFWNTLLPRLVKAIEDT-GDNILLFETPQTMDRDKF 455 G PD +L RPVLGG KQ PYPRRCRTGRP D SE R+GN YVPRDE FSEVK F KT+ SVLHA VP+ ++A +D +L FP F ID LF +GV LP +++ GF ++++PRL++ + D+ GD ILLF+TP + +DKF Sbjct: 287 GNPDSNGDLARPVLGGSKQFPYPRRCRTGRPPSKKDPKSETRKGNVYVPRDEEFSEVKNAQFLLKTLQSVLHAAVPAAQSALIDNLSLNLPFPSFFVIDKLFEDGVELPGVEKLGFLHSIVPRLLELLRDSPGDKILLFDTPANVQKDKF 436
BLAST of FC871807 vs. ExPASy Swiss-Prot
Match: LOX2_ARATH (Lipoxygenase 2, chloroplastic OS=Arabidopsis thaliana GN=LOX2 PE=1 SV=1) HSP 1 Score: 140.584 bits (353), Expect = 3.030e-33 Identity = 71/146 (48.63%), Postives = 95/146 (65.07%), Query Frame = 3 Query: 21 GYPDKKPELTRPVLGGKQNPYPRRCRTGRPRCDTDQFSEKREGN-FYVPRDEAFSEVKQLTFSAKTVYSVLHALVPSLETAFVDPDLGFPYFSAIDALFNEGVNLPPLKQEGFWNTLLPRLVKAIEDTGDNILLFETPQTMDRDKF 455 G PD PEL RPV+GG +PYPRRC+TGR C+TD SE+R G FYVPRDE FS K +F+ K V + L ++ P +E+ + P FP+F AI LF EG+ LP K G LLPR++KA+ + D+IL F+ P ++RD+F Sbjct: 250 GDPDNDPELARPVIGGLTHPYPRRCKTGRKPCETDPSSEQRYGGEFYVPRDEEFSTAKGTSFTGKAVLAALPSIFPQIESVLLSPQEPFPHFKAIQNLFEEGIQLP--KDAGLL-PLLPRIIKALGEAQDDILQFDAPVLINRDRF 392
BLAST of FC871807 vs. ExPASy Swiss-Prot
Match: LOXC1_ORYSJ (Lipoxygenase 7, chloroplastic OS=Oryza sativa subsp. japonica GN=CM-LOX1 PE=2 SV=2) HSP 1 Score: 136.732 bits (343), Expect = 4.376e-32 Identity = 76/150 (50.67%), Postives = 96/150 (64.00%), Query Frame = 3 Query: 21 GYPDKKPELTRPVLGG-KQNPYPRRCRTGRPRCDTDQFSEKREGNFYVPRDEAFSEVKQLTFSAKTVYSVLHALVPSLETAFVDP---DLGFPYFSAIDALFNEGVNLPPLKQEGFWNTLLPRLVKAIEDT-GDNILLFETPQTMDRDKF 455 G PD +L RPVLGG KQ PYPRRCRTGRP D SE R+GN YVPRDE FS K+ F KTV SVL A VP+ ++ +D +L FP F ID LF +GV LP + + F +++PRL++ + DT + IL FETP + +DKF Sbjct: 270 GNPDSNGDLARPVLGGNKQFPYPRRCRTGRPPSKKDPKSETRKGNVYVPRDEEFSPEKEDYFLRKTVGSVLQAAVPAAQSLLLDKLKWNLPFPSFFVIDKLFEDGVELPGVDKLNFLESVVPRLLEHLRDTPAEKILRFETPANIQKDKF 419
BLAST of FC871807 vs. ExPASy Swiss-Prot
Match: LOX23_HORVU (Lipoxygenase 2.3, chloroplastic OS=Hordeum vulgare GN=LOX2.3 PE=1 SV=1) HSP 1 Score: 135.191 bits (339), Expect = 1.273e-31 Identity = 71/149 (47.65%), Postives = 100/149 (67.11%), Query Frame = 3 Query: 21 GYPDKKPELTRPVLGGKQNPYPRRCRTGRPRCDTDQFSEKREGNFYVPRDEAFSEVKQLTFSAKTVYSVLHALVPSLETAFVDPDLGFPYFSAIDALFNEGVNLPPLKQEG----FWNTLLPRLVKAIEDTGDNILLFETPQTMDRDKF 455 G PDK + RPVLG K++PYPRRCRTGRP+ D +E R YVPRDE FS+VK TFSA T+ S LHA++P++ ++ GF +F AIDAL+++G+ LP G N ++PR+V+ IEDT +++L FE P+ ++RD+F Sbjct: 247 GDPDKNIDHKRPVLGTKEHPYPRRCRTGRPKTLYDPETETRSSPVYVPRDEQFSDVKGRTFSATTLRSGLHAILPAV-APLLNNSHGFSHFPAIDALYSDGIPLPVDGHGGNSFNVINDVIPRVVQMIEDTTEHVLRFEVPEMLERDRF 394
BLAST of FC871807 vs. ExPASy Swiss-Prot
Match: LOX4_ARATH (Lipoxygenase 4, chloroplastic OS=Arabidopsis thaliana GN=LOX4 PE=2 SV=1) HSP 1 Score: 119.013 bits (297), Expect = 9.442e-27 Identity = 64/149 (42.95%), Postives = 92/149 (61.74%), Query Frame = 3 Query: 21 GYPDKKPELTRPVLGGKQNPYPRRCRTGRPRCDTDQFSEKREGN---FYVPRDEAFSEVKQLTFSAKTVYSVLHALVPSLETAFVDPDLGFPYFSAIDALFNEGVNLP-PLKQEGFWNTLLPRLVKAIEDTGDNILLFETPQTMDRDKF 455 G PD EL RP LGG++ PYPRRCRTGR DTD SE+R YVPRDE F E KQ TF+A + +VLH L+PSL+ + + D F F ID+L+ EG+ L + + F LP++V ++ + + +L ++TP+ + +DK+ Sbjct: 276 GNPDISRELARPTLGGREFPYPRRCRTGRSSTDTDMMSERRVEKPLPMYVPRDEQFEESKQNTFAACRLKAVLHNLIPSLKASILAED--FANFGEIDSLYKEGLLLKLGFQDDMFKKFPLPKIVTTLQKSSEGLLRYDTPKIVSKDKY 422
BLAST of FC871807 vs. ExPASy Swiss-Prot
Match: LOX6_ORYSJ (Probable lipoxygenase 6 OS=Oryza sativa subsp. japonica GN=Os03g0179900 PE=2 SV=2) HSP 1 Score: 117.857 bits (294), Expect = 2.103e-26 Identity = 64/148 (43.24%), Postives = 89/148 (60.14%), Query Frame = 3 Query: 21 GYPDKKPELTRPVLGGKQNPYPRRCRTGRPRCDTDQFSEKREGN---FYVPRDEAFSEVKQLTFSAKTVYSVLHALVPSLETAFVDPDLGFPYFSAIDALFNEGVNLPPLKQEGFWNTLLPRLVKAIEDTGDNILLFETPQTMDRDKF 455 G PDK E RP+LGG++ PYPRRCRTGRP DT+ +E R YVPRDEAF E+KQ FS+ + +VLH L+PSL + F F ID L+ EG+ L QE + + LV+ I+++ + +L ++TP + +DKF Sbjct: 266 GNPDKGKEFIRPILGGEKIPYPRRCRTGRPPTDTNMLAESRVEKPHPIYVPRDEAFEELKQGAFSSGRLRAVLHTLIPSLIASISAETHNFQGFHHIDNLYKEGLRLKLGLQEHLFQKI--PLVQKIQESSEGMLRYDTPSILSKDKF 411
BLAST of FC871807 vs. ExPASy Swiss-Prot
Match: LOX21_HORVU (Lipoxygenase 2.1, chloroplastic OS=Hordeum vulgare GN=LOX2.1 PE=1 SV=1) HSP 1 Score: 110.538 bits (275), Expect = 3.358e-24 Identity = 70/156 (44.87%), Postives = 85/156 (54.49%), Query Frame = 3 Query: 30 DKKPELTRPVLGGKQNPYPRRCRTGRPRCDTDQFSEKR--EGNFYVPRDEAFSEVKQLTFSAKTVYSVLHALVPSLETAFVDPDLGFPYFSAIDALFNEGVNLPPLKQEG--------FWNTLLPRLVK----AIEDTGDNILLFETPQTMDRDKF 455 D TRPVLGGK++PYPRRCRTGRPR D FSE+R + + YVPRDEAF+E K F K S LHAL L+TA FP SAID L+++ P++ EG T L L K A + + FETP+ DRDKF Sbjct: 269 DDNNPTTRPVLGGKEHPYPRRCRTGRPRSKKDPFSEERSHKEHIYVPRDEAFTERKMGAFDTKKFMSQLHALTTGLKTA-KHKSQSFPSLSAIDQLYDDNFRNQPVQPEGGKLRFVIDLLETELLHLFKLEGAAFLEGIRRVFKFETPEIHDRDKF 423
BLAST of FC871807 vs. ExPASy Swiss-Prot
Match: LOX3_ARATH (Lipoxygenase 3, chloroplastic OS=Arabidopsis thaliana GN=LOX3 PE=2 SV=1) HSP 1 Score: 108.997 bits (271), Expect = 9.771e-24 Identity = 64/149 (42.95%), Postives = 91/149 (61.07%), Query Frame = 3 Query: 21 GYPDKKPELTRPVLGGKQNPYPRRCRTGRPRCDTDQFSEKREGN---FYVPRDEAFSEVKQLTFSAKTVYSVLHALVPSLETAFVDPDLGFPYFSAIDALFNEGVNLPPLKQEGFWNTL-LPR-LVKAIEDTGDNILLFETPQTMDRDK 452 G PDK EL+RP LGGK+ PYPRRCRTGR +D+ +E R YVPRDE F E KQ TF+A + +VLH L+PSL+ + V D F F ID L+ EG+ L Q+ + LP+ +V ++++ +L ++TP+ + +DK Sbjct: 270 GNPDKSSELSRPKLGGKEVPYPRRCRTGRQSTVSDKDAESRVEKPLPMYVPRDEQFEESKQDTFAAGRLKAVLHHLIPSLKASIVAED--FADFGEIDRLYKEGLLLKLGFQDDIFKKFPLPKVVVDTLQESTKGLLKYDTPKILSKDK 416
BLAST of FC871807 vs. ExPASy Swiss-Prot
Match: LOX22_HORVU (Lipoxygenase 2.2, chloroplastic OS=Hordeum vulgare GN=LOX2.2 PE=1 SV=1) HSP 1 Score: 106.301 bits (264), Expect = 6.333e-23 Identity = 65/156 (41.67%), Postives = 88/156 (56.41%), Query Frame = 3 Query: 36 KPELTRPVLGGKQNPYPRRCRTGRPRCDTDQFSEK---REGNFYVPRDEAFSEVKQLTFSAKTVYSVLHALVPSLETAFVDPDL--GFPYFSAIDALFNEGVNLPPLKQEG-----FWNTLLPRLVKAIEDTG-------DNILLFETPQTMDRDK 452 KPE RPVLGGK++PYPRRCRTGRPR TD SE+ ++G YVPRDE F+E K+ F K + S LH L L+ V+ D+ FP ++IDAL+++ P++ EG + L LV ++ G + FETP+ D DK Sbjct: 269 KPESKRPVLGGKEHPYPRRCRTGRPRSKTDPSSEEESHKKGEMYVPRDETFTERKEQAFLTKQLLSQLHGLCTGLK---VNKDILPSFPTLASIDALYDDDFRNQPVQPEGGKVRLILDLLAKELVHLVKLEGAEFVEGIRRVFKFETPEIHDMDK 421
BLAST of FC871807 vs. ExPASy Swiss-Prot
Match: LOX5_ORYSJ (Putative lipoxygenase 5 OS=Oryza sativa subsp. japonica GN=Os04g0447100 PE=3 SV=2) HSP 1 Score: 93.5893 bits (231), Expect = 4.248e-19 Identity = 57/149 (38.26%), Postives = 80/149 (53.69%), Query Frame = 3 Query: 21 GYPDKKPELTRPVLGGKQNPYPRRCRTGRPRCDTDQFSEKR---EGNFYVPRDEAFSEVKQLTFSAKTVYSVLHALVPSLETAFVDPDL-GFPYFSAIDALFNEGVNLPPLKQEGFWNTLLPRLVKAIEDTGDNILLFETPQTMDRDKF 455 G PDK RPVLGG+Q PYPRR RTGRP TD +E R YV RDE F E K S + ++LH +P L ++ V PD+ F F +D LF EG+ L + + + V+ I++ + +L ++TP + +DKF Sbjct: 252 GNPDKGVASARPVLGGEQMPYPRRMRTGRPSTATDASAESRVEYPEPIYVSRDEEFEEGKNEMLSEGAIKALLHNFMPLLVSS-VSPDIRDFAGFHDVDNLFKEGLRLKQALHDQLFQKI--PFVRKIQENSEGLLRYDTPDIIKKDKF 397 The following BLAST results are available for this feature:
BLAST of FC871807 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 29
Pagesback to topProperties
Sequences
The
following sequences are available for this feature:
EST sequence >FC871807 ID=FC871807; Name=FC871807; organism=Citrus sinensis; type=EST; length=457bpback to top |