CX672188

Overview
NameCX672188
Unique NameCX672188
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length871
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CX672188 vs. ExPASy Swiss-Prot
Match: DEGP5_ARATH (Protease Do-like 5, chloroplastic OS=Arabidopsis thaliana GN=DEGP5 PE=1 SV=3)

HSP 1 Score: 336.265 bits (861), Expect = 1.388e-91
Identity = 165/214 (77.10%), Postives = 186/214 (86.92%), Query Frame = -3
Query:  225 PKSTSSELMLVDGEYAKVEGTGSGFVWDMFGHIVTNYHVVAKLATDTSGLHRCKVSLFDAKGNGFYREGKMVGYDPAYDLAVLKVDVEGYELKPVVLGTSHDLRVGQSCFAIGNPYGFEDTLTTGVVSGLGREIPSPNGRAIRGAIQTDAAINSGNSGGPLINSFGHVIGVNTATFTRKGTGLSSGVNFAIPIDTVVRTVPYLIVYGTPYSNRF 866
            PK++S ++ L D E  K+EGTGSGFVWD  GHIVTNYHV+AKLATD  GL RCKVSL DAKG  F +EGK+VG DP  DLAVLK++ EG EL PVVLGTS+DLRVGQSCFAIGNPYG+E+TLT GVVSGLGREIPSPNG++I  AIQTDA INSGNSGGPL++S+GH IGVNTATFTRKG+G+SSGVNFAIPIDTVVRTVPYLIVYGT Y +RF
Sbjct:  111 PKTSSGDI-LTDEENGKIEGTGSGFVWDKLGHIVTNYHVIAKLATDQFGLQRCKVSLVDAKGTRFSKEGKIVGLDPDNDLAVLKIETEGRELNPVVLGTSNDLRVGQSCFAIGNPYGYENTLTIGVVSGLGREIPSPNGKSISEAIQTDADINSGNSGGPLLDSYGHTIGVNTATFTRKGSGMSSGVNFAIPIDTVVRTVPYLIVYGTAYRDRF 323          
BLAST of CX672188 vs. ExPASy Swiss-Prot
Match: DEGP8_ARATH (Protease Do-like 8, chloroplastic OS=Arabidopsis thaliana GN=DEGP8 PE=1 SV=1)

HSP 1 Score: 189.504 bits (480), Expect = 2.098e-47
Identity = 104/190 (54.74%), Postives = 131/190 (68.95%), Query Frame = -3
Query:  249 EGTGSGFVWDMFGHIVTNYHVVAKLAT--DTSGLHRCKVSLFDAKGNGFYREGKMVGYDPAYDLAVLKVDVEGYELKPVVLGTSHDLRVGQSCFAIGNPYGFEDTLTTGVVSGLGREIPSPNGRAIRGAIQTDAAINSGNSGGPLINSFGHVIGVNTATFTRKGTGLSSGVNFAIPIDTVVRTVPYLIVY 812
            EG GSG VWD  G+IVTNYHV+    +   + G    +V++  + G     EGK+VG D A DLAVLKVD     LKP+ +G S+ L+VGQ C AIGNP+GF+ TLT GV+SGL R+I S  G  I G IQTDAAIN GNSGGPL++S G++IG+NTA FT+  TG S+GV FAIP  TV++ VP LI +
Sbjct:  152 EGNGSGVVWDGQGYIVTNYHVIGNALSRNPSPGDVVGRVNILASDGVQKNFEGKLVGADRAKDLAVLKVDAPETLLKPIKVGQSNSLKVGQQCLAIGNPFGFDHTLTVGVISGLNRDIFSQTGVTIGGGIQTDAAINPGNSGGPLLDSKGNLIGINTAIFTQ--TGTSAGVGFAIPSSTVLKIVPQLIQF 339          
BLAST of CX672188 vs. ExPASy Swiss-Prot
Match: DEGP1_ARATH (Protease Do-like 1, chloroplastic OS=Arabidopsis thaliana GN=DEGP1 PE=1 SV=2)

HSP 1 Score: 176.792 bits (447), Expect = 1.407e-43
Identity = 98/190 (51.58%), Postives = 128/190 (67.37%), Query Frame = -3
Query:  246 EGTGSGFVWDMFGHIVTNYHVVAKLATDTSGLHRCKVSLFDAKGNGFYREGKMVGYDPAYDLAVLKVDVEGYELKPVVLGTSHDLRVGQSCFAIGNPYGFEDTLTTGVVSGLGREIPS-PNGRAIRGAIQTDAAINSGNSGGPLINSFGHVIGVNTATFTRKGTGLSSGVNFAIPIDTVVRTVPYLIVYG 812
            +G+GSGFVWD  GHIVTNYHV+        G    +V+L D        + K+VG+D   D+AVL++D    +L+P+ +G S DL VGQ  FAIGNP+G + TLTTGV+SGL REI S   GR I+  IQTDAAIN GNSGGPL++S G +IG+NTA ++   +G SSGV F+IP+DTV   V  L+ +G
Sbjct:  154 QGSGSGFVWDKQGHIVTNYHVIR-------GASDLRVTLADQTTF----DAKVVGFDQDKDVAVLRIDAPKNKLRPIPVGVSADLLVGQKVFAIGNPFGLDHTLTTGVISGLRREISSAATGRPIQDVIQTDAAINPGNSGGPLLDSSGTLIGINTAIYS--PSGASSGVGFSIPVDTVGGIVDQLVRFG 330          
BLAST of CX672188 vs. ExPASy Swiss-Prot
Match: Y938_SYNP6 (Uncharacterized serine protease syc0938_d OS=Synechococcus sp. (strain ATCC 27144 / PCC 6301 / SAUG 1402/1) GN=syc0938_d PE=3 SV=2)

HSP 1 Score: 123.25 bits (308), Expect = 1.846e-27
Identity = 82/191 (42.93%), Postives = 109/191 (57.07%), Query Frame = -3
Query:  246 GTGSGFVWDMFGHIVTNYHVVAKLATDTSGLHRCKVSLFDAKGNGFYREGKMVGYDPAYDLAVLKVDVEGYELKPVVLGTSHDLRVGQSCFAIGNPYGFEDTLTTGVVSGLGRE---IPSPNGRAIRGAIQTDAAINSGNSGGPLINSFGHVIGVNTATFTRKGTGLSSGVNFAIPIDTVVRTVPYLIVYG 809
            G GSGFV D  G I+TN HVVA          + +V+L D  G  F   G++ G D   DLA+++VD +G  L    +G S ++ VG    AIGNP G ++T+T G+VS LGR    +  P+ R     IQTDA IN GNSGGPL+NS G VIG+NTA     G    +G+ FAIP++T  +    L+  G
Sbjct:  123 GQGSGFVVDGNGLIMTNAHVVANA-------DQVRVTLRD--GREF--TGRVRGADSVTDLALVEVDTKGERLPTARIGNSSNVEVGDWAIAIGNPLGLDNTVTLGIVSSLGRRSSAVGIPDKRL--DFIQTDAVINPGNSGGPLVNSRGEVIGINTAIRQAPG----AGIGFAIPVNTAKQIETQLLKNG 296          
BLAST of CX672188 vs. ExPASy Swiss-Prot
Match: DEGP_RICPR (Probable serine protease do-like OS=Rickettsia prowazekii GN=degP PE=3 SV=2)

HSP 1 Score: 121.709 bits (304), Expect = 5.372e-27
Identity = 78/175 (44.57%), Postives = 102/175 (58.29%), Query Frame = -3
Query:  282 GSGFVWDMFGHIVTNYHVVAKLATDTSGLHRCKVSLFDAKGNGFYREGKMVGYDPAYDLAVLKVDVEGYELKPVVLGTSHDLRVGQSCFAIGNPYG-FEDTLTTGVVSGLGREIPSPNGRAIRGAIQTDAAINSGNSGGPLINSFGHVIGVNTATFTRKGTGLSSGVNFAIPIDT 803
            GSGF+    G IVTNYHV+A +          K+++  A    F    K++G D   DLA+LK+D E   L  V  G S+D RVG    AIGNP+G    T+T+G++S  GR+I       +   IQTDAAIN+GNSGGP+ N    VIGVNTA F+  GT +  G+ FAIP +T
Sbjct:  123 GSGFIIAPNGLIVTNYHVIANVE---------KINIKLADNTEFL--AKLIGSDSKTDLALLKIDSEE-PLPFVEFGDSNDARVGDWVIAIGNPFGNLGGTVTSGIISSKGRDIDVDTDNIVDNFIQTDAAINNGNSGGPMFNLDQKVIGVNTAIFSPLGTNI--GIGFAIPSNT 283          
BLAST of CX672188 vs. ExPASy Swiss-Prot
Match: DEGP_RICCN (Probable serine protease do-like OS=Rickettsia conorii GN=degP PE=3 SV=2)

HSP 1 Score: 121.709 bits (304), Expect = 5.372e-27
Identity = 77/175 (44.00%), Postives = 101/175 (57.71%), Query Frame = -3
Query:  282 GSGFVWDMFGHIVTNYHVVAKLATDTSGLHRCKVSLFDAKGNGFYREGKMVGYDPAYDLAVLKVDVEGYELKPVVLGTSHDLRVGQSCFAIGNPYG-FEDTLTTGVVSGLGREIPSPNGRAIRGAIQTDAAINSGNSGGPLINSFGHVIGVNTATFTRKGTGLSSGVNFAIPIDT 803
            GSGF+ +  G IVTNYHV+A +        +  + L D          K++G D   DLA+LK+D E   L  V  G S+D RVG    AIGNP+G    T+T+G++S  GR+I       +   IQTDAAIN+GNSGGP+ N    VIGVNTA F+  GT +  G+ FAIP +T
Sbjct:  118 GSGFIIEPNGLIVTNYHVIANV-------DKINIKLAD----NTELSAKLIGNDTKTDLALLKIDSEE-PLPFVEFGDSNDARVGDWVIAIGNPFGNLGGTVTSGIISSKGRDIDIDTDNIVDNFIQTDAAINNGNSGGPMFNLDQKVIGVNTAIFSPLGTNI--GIGFAIPSNT 278          
BLAST of CX672188 vs. ExPASy Swiss-Prot
Match: DEGP_CHLTR (Probable serine protease do-like OS=Chlamydia trachomatis GN=degP PE=3 SV=2)

HSP 1 Score: 118.627 bits (296), Expect = 4.548e-26
Identity = 80/186 (43.01%), Postives = 104/186 (55.91%), Query Frame = -3
Query:  246 GSGFVWDMFGHIVTNYHVVAKLATDTSGLHRCKVSLFDAKGNGFYREGKMVGYDPAYDLAVLKVDVEGYELKPVVLGTSHDLRVGQSCFAIGNPYGFEDTLTTGVVSGLGREIPSPNGRAIRGAIQTDAAINSGNSGGPLINSFGHVIGVNTATFTRKGTGLSSGVNFAIPIDTVVRTVPYLIVYG 803
            G+GF+    G++VTN+HVV     D   +H   V+L D    G     K+VG DP  DLAV+K+  E  +L  +  G S  L++G    AIGNP+G + T+T GV+S  GR     +       IQTDAAIN GNSGGPL+N  G VIGVNTA  +  G+G   G+ FAIP     R +  LI  G
Sbjct:  127 GTGFIVSEDGYVVTNHHVVE----DAGKIH---VTLHD----GQKYTAKIVGLDPKTDLAVIKIQAE--KLPFLTFGNSDQLQIGDWAIAIGNPFGLQATVTVGVISAKGRN--QLHIVDFEDFIQTDAAINPGNSGGPLLNINGQVIGVNTAIVS--GSGGYIGIGFAIPSLMAKRVIDQLISDG 295          
BLAST of CX672188 vs. ExPASy Swiss-Prot
Match: DEGP_BRUSU (Probable serine protease do-like OS=Brucella suis GN=degP PE=3 SV=1)

HSP 1 Score: 117.087 bits (292), Expect = 1.323e-25
Identity = 75/187 (40.11%), Postives = 100/187 (53.48%), Query Frame = -3
Query:  243 GSGFVWDMFGHIVTNYHVVAKLATDTSGLHRCKVSLFDAKGNGFYREGKMVGYDPAYDLAVLKVDVEGYELKPVVLGTSHDLRVGQSCFAIGNPYGFEDTLTTGVVSGLGREIPSPNGRAIRGAIQTDAAINSGNSGGPLINSFGHVIGVNTATFTRKGTGLSSGVNFAIPIDTVVRTVPYLIVYGT 803
            GSGFV    G++VTN HVV+     T  L            +G   + K++G DP  DLAVLK++    +   V  G  + +RVG    A+GNP+G   T+T+G+VS  GR+I           IQ DAA+N GNSGGP  +  G VIG+NTA F+  G   S G+ FAIP  T  + V  LI  G+
Sbjct:  136 GSGFVISEDGYVVTNNHVVSDGDAYTVVLD-----------DGTELDAKLIGADPRTDLAVLKINAPKRKFVYVAFGDDNKVRVGDWVVAVGNPFGLGGTVTSGIVSARGRDI---GAGPYDDFIQIDAAVNKGNSGGPAFDLSGEVIGINTAIFSPSGG--SVGIAFAIPSSTAKQVVDQLIKKGS 306          
BLAST of CX672188 vs. ExPASy Swiss-Prot
Match: DEGP_BRUME (Probable serine protease do-like OS=Brucella melitensis GN=degP PE=3 SV=1)

HSP 1 Score: 117.087 bits (292), Expect = 1.323e-25
Identity = 75/187 (40.11%), Postives = 100/187 (53.48%), Query Frame = -3
Query:  243 GSGFVWDMFGHIVTNYHVVAKLATDTSGLHRCKVSLFDAKGNGFYREGKMVGYDPAYDLAVLKVDVEGYELKPVVLGTSHDLRVGQSCFAIGNPYGFEDTLTTGVVSGLGREIPSPNGRAIRGAIQTDAAINSGNSGGPLINSFGHVIGVNTATFTRKGTGLSSGVNFAIPIDTVVRTVPYLIVYGT 803
            GSGFV    G++VTN HVV+     T  L            +G   + K++G DP  DLAVLK++    +   V  G  + +RVG    A+GNP+G   T+T+G+VS  GR+I           IQ DAA+N GNSGGP  +  G VIG+NTA F+  G   S G+ FAIP  T  + V  LI  G+
Sbjct:  136 GSGFVISEDGYVVTNNHVVSDGDAYTVVLD-----------DGTELDAKLIGADPRTDLAVLKINAPKRKFVYVAFGDDNKVRVGDWVVAVGNPFGLGGTVTSGIVSARGRDI---GAGPYDDFIQIDAAVNKGNSGGPAFDLSGEVIGINTAIFSPSGG--SVGIAFAIPSSTAKQVVDQLIKKGS 306          
BLAST of CX672188 vs. ExPASy Swiss-Prot
Match: DEGP_BRUAB (Probable serine protease do-like OS=Brucella abortus GN=degP PE=3 SV=1)

HSP 1 Score: 117.087 bits (292), Expect = 1.323e-25
Identity = 75/187 (40.11%), Postives = 100/187 (53.48%), Query Frame = -3
Query:  243 GSGFVWDMFGHIVTNYHVVAKLATDTSGLHRCKVSLFDAKGNGFYREGKMVGYDPAYDLAVLKVDVEGYELKPVVLGTSHDLRVGQSCFAIGNPYGFEDTLTTGVVSGLGREIPSPNGRAIRGAIQTDAAINSGNSGGPLINSFGHVIGVNTATFTRKGTGLSSGVNFAIPIDTVVRTVPYLIVYGT 803
            GSGFV    G++VTN HVV+     T  L            +G   + K++G DP  DLAVLK++    +   V  G  + +RVG    A+GNP+G   T+T+G+VS  GR+I           IQ DAA+N GNSGGP  +  G VIG+NTA F+  G   S G+ FAIP  T  + V  LI  G+
Sbjct:  136 GSGFVISEDGYVVTNNHVVSDGDAYTVVLD-----------DGTELDAKLIGADPRTDLAVLKINAPKRKFVYVAFGDDNKVRVGDWVVAVGNPFGLGGTVTSGIVSARGRDI---GAGPYDDFIQIDAAVNKGNSGGPAFDLSGEVIGINTAIFSPSGG--SVGIAFAIPSSTAKQVVDQLIKKGS 306          
The following BLAST results are available for this feature:
BLAST of CX672188 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 65
Match NameE-valueIdentityDescription
DEGP5_ARATH1.388e-9177.10Protease Do-like 5, chloroplastic OS=Arabidopsis t... [more]
DEGP8_ARATH2.098e-4754.74Protease Do-like 8, chloroplastic OS=Arabidopsis t... [more]
DEGP1_ARATH1.407e-4351.58Protease Do-like 1, chloroplastic OS=Arabidopsis t... [more]
Y938_SYNP61.846e-2742.93Uncharacterized serine protease syc0938_d OS=Synec... [more]
DEGP_RICPR5.372e-2744.57Probable serine protease do-like OS=Rickettsia pro... [more]
DEGP_RICCN5.372e-2744.00Probable serine protease do-like OS=Rickettsia con... [more]
DEGP_CHLTR4.548e-2643.01Probable serine protease do-like OS=Chlamydia trac... [more]
DEGP_BRUSU1.323e-2540.11Probable serine protease do-like OS=Brucella suis ... [more]
DEGP_BRUME1.323e-2540.11Probable serine protease do-like OS=Brucella melit... [more]
DEGP_BRUAB1.323e-2540.11Probable serine protease do-like OS=Brucella abort... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS10_15E05_b Madame Vinous Sweet Orange Multiple Pathogen-Infected cDNA Library UCRCS10 Citrus sinensis cDNA clone UCRCS10-15E05-J9-6.b, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX672188 ID=CX672188; Name=CX672188; organism=Citrus sinensis; type=EST; length=871bp
TTTTTTAATGCATTAATGATCCCTTTATTGCAGGAGCAAATCCTGGGAGA
CTGCTGACAAGGATGCAGAGTCTTGATGCTAGCACTAAATATTGTCATAA
GTGGTCAATTTAATTATCTTGGAAACAAGAAGGAAAAGTATACAGTGAGA
TTGCACAATTTACATAATTTGAGTTTCAGGGCTAAATCGTACATAGCAAA
ATTACAGAAAAGATACTATTATCAAAACCTGTTACTATAGGGTGTTCCAT
ACACAATAAGGTAAGGCACGGTTCGCACAACAGTGTCAATTGGTATGGCA
AAATTCACACCGGAGGATAATCCTGTCCCTTTGCGGGTAAAAGTTGCTGT
GTTAACTCCTATAACATGGCCAAATGAATTGATTAGTGGCCCACCCGAAT
TCCCTGAATTAATAGCAGCATCTGTTTGGATAGCTCCTCGAATGGCTCTT
CCATTTGGTGATGGTATCTCCCTGCCAAGTCCACTGACAACCCCTGTCGT
AAGTGTGTCTTCAAATCCATAAGGATTCCCAATTGCAAAGCAACTCTGAC
CTACACGTAAATCATGCGATGTACCCAGAACGACAGGCTTCAATTCATAT
CCTTCAACATCTACCTTCAGAACAGCTAAATCATAAGCTGGATCATAACC
AACCATCTTGCCCTCCCTATAAAAGCCATTGCCTTTGGCATCAAATAGAG
AAACCTTACAACGATGCAACCCACTTGTATCTGTGGCCAATTTGGCTACA
ACATGATAATTAGTGACGATGTGACCAAACATATCCCAAACAAAGCCAGA
ACCCGTGCCTTCAACTTTTGCATATTCACCATCAACAAGCATCAATTCAC
TAGAAGTGCTCTTTGGGTTTT
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