FC871801

Overview
NameFC871801
Unique NameFC871801
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length503
Libraries
Library NameType
AbsCFruit1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
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BLAST of FC871801 vs. ExPASy Swiss-Prot
Match: PRX2F_ARATH (Peroxiredoxin-2F, mitochondrial OS=Arabidopsis thaliana GN=PRXIIF PE=1 SV=2)

HSP 1 Score: 148.288 bits (373), Expect = 1.890e-35
Identity = 70/90 (77.78%), Postives = 79/90 (87.78%), Query Frame = 3 
Query:    3 SVILLAVNDPYVMNGWAEKLQAKDVIEFYGDFDGSFHKSLDLGKDLSAALLGPRSERWSAYVEDGRIKALNVEEAPSKMKVSGGDVISGQ 272
            SVI ++VNDP+ +NGWAEKL AKD IEFYGDFDG FHKSL L KDLSAALLGPRSERWSAYVEDG++KA+NVEEAPS  KV+G +VI GQ
Sbjct:  111 SVICVSVNDPFAINGWAEKLGAKDAIEFYGDFDGKFHKSLGLDKDLSAALLGPRSERWSAYVEDGKVKAVNVEEAPSDFKVTGAEVILGQ 200
[Close]
BLAST of FC871801 vs. ExPASy Swiss-Prot
Match: PRX2F_ORYSJ (Peroxiredoxin-2F, mitochondrial OS=Oryza sativa subsp. japonica GN=PRXIIF PE=2 SV=1)

HSP 1 Score: 141.739 bits (356), Expect = 1.769e-33
Identity = 69/90 (76.67%), Postives = 76/90 (84.44%), Query Frame = 3 
Query:    3 SVILLAVNDPYVMNGWAEKLQAKDVIEFYGDFDGSFHKSLDLGKDLSAALLGPRSERWSAYVEDGRIKALNVEEAPSKMKVSGGDVISGQ 272
            SVI ++VNDPY +NGWAEKLQAKD IEFYGDFDGSFHKSLDL  DLSAALLG RS RWSA+V+DG+IKA NVE APS  KVSG +VI  Q
Sbjct:  108 SVICVSVNDPYALNGWAEKLQAKDAIEFYGDFDGSFHKSLDLEVDLSAALLGRRSHRWSAFVDDGKIKAFNVEVAPSDFKVSGAEVILDQ 197
The following BLAST results are available for this feature:
BLAST of FC871801 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 2
Match NameE-valueIdentityDescription
PRX2F_ARATH1.890e-3577.78Peroxiredoxin-2F, mitochondrial OS=Arabidopsis tha... [more]
PRX2F_ORYSJ1.769e-3376.67Peroxiredoxin-2F, mitochondrial OS=Oryza sativa su... [more]
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Properties
Property NameValue
Genbank descriptionKN0AAK3BH06FM1 AbsCFruit1 Citrus sinensis cDNA clone KN0AAK3BH06, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC871801 ID=FC871801; Name=FC871801; organism=Citrus sinensis; type=EST; length=503bp
ATTCTGTAATTCTTTTGGCCGTCAATGATCCATACGTTATGAATGGCTGG
GCAGAGAAACTTCAAGCCAAAGATGTTATTGAATTTTATGGAGACTTTGA
TGGAAGCTTCCACAAGAGCTTGGACTTGGGAAAAGATCTTTCTGCTGCTT
TGCTTGGTCCTCGCTCTGAAAGGTGGTCAGCATATGTAGAGGATGGGAGG
ATTAAGGCTCTTAATGTGGAGGAAGCACCATCAAAGATGAAGGTTTCTGG
TGGCGATGTCATTTCGGGACAGATCTAAATATGTTTCAGTATCATTTGCC
ATTGATTCAAGCTTTTGTATGCGTAGAACATGTTTTTCAATTACTCTAAG
CAGAGAAGGTCAGCGAGTAATAACTTGGAAATGTTGCTCCAATACTAGTT
ATAGTGTTATCTTTCTTACTATTGTTAATCCTCTGAAAATCACCTACATT
GAGAATAAGTTTATGGTAAAAGCAGTCTGAGAGAAAAAAAAAAAAAAAAA
AAA
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