CX672163

Overview
NameCX672163
Unique NameCX672163
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length743
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CX672163 vs. ExPASy Swiss-Prot
Match: PYR5_TOBAC (Uridine 5'-monophosphate synthase (Fragment) OS=Nicotiana tabacum GN=PYR5-6 PE=2 SV=1)

HSP 1 Score: 236.498 bits (602), Expect = 1.160e-61
Identity = 121/156 (77.56%), Postives = 126/156 (80.77%), Query Frame = -1
Query:  276 GGIFRILDWADIINAHIISGPGIVDXXXXXXXXXXXXXXXLAEMSSAGNLAKGDYTAAAVKIAEDHSDFVIGFISVNPASWPGAPVNPAFIQATPGVQMVKGGDDLGQQYNTPYSVIYDRGSDIIIVGRGIIKAADPALAAREYRLQGWEAYLAKC 743
            GGIFRILDWADI NAHIISGPGIVD               LAEMSSAGNLA G YTAAAVKIAEDHSDFVIGFISVNPASWP AP NP+ I ATPGVQ+VKGGD LGQ YNTP +VI DRGSDIIIVGRGIIKAA+P  AAREYRLQGW+AYL  C
Sbjct:  305 GGIFRILDWADITNAHIISGPGIVDGLKLKGLSRGRGLLLLAEMSSAGNLATGAYTAAAVKIAEDHSDFVIGFISVNPASWPNAPGNPSLIHATPGVQLVKGGDALGQLYNTPSAVIADRGSDIIIVGRGIIKAANPIEAAREYRLQGWDAYLVNC 460          
BLAST of CX672163 vs. ExPASy Swiss-Prot
Match: PYR5_ARATH (Uridine 5'-monophosphate synthase OS=Arabidopsis thaliana GN=PYRE-F PE=2 SV=2)

HSP 1 Score: 225.713 bits (574), Expect = 2.048e-58
Identity = 115/157 (73.25%), Postives = 125/157 (79.62%), Query Frame = -1
Query:  273 GGIFRILDWADIINAHIISGPGIVDXXXXXXXXXXXXXXXLAEMSSAGNLAKGDYTAAAVKIAEDHSDFVIGFISVNPASWPGAPVNPAFIQATPGVQMVKGGDDLGQQYNTPYSVIYDRGSDIIIVGRGIIKAADPALAAREYRLQGWEAYLAKCS 743
            GGIF+IL+WADIINAH+ISGPGIVD               LAEMSSAGNLA GDYTAAAVKIA+ HSDFV+GFISVNPASW    V P+ I ATPGVQMVKGGD LGQQYNTP+SVI +RGSDIIIVGRGIIKA +PA  A EYR+QGW AYL KCS
Sbjct:  319 GGIFKILEWADIINAHVISGPGIVDGLKLKGMPRGRGLLLLAEMSSAGNLATGDYTAAAVKIADAHSDFVMGFISVNPASWKCGYVYPSMIHATPGVQMVKGGDALGQQYNTPHSVITERGSDIIIVGRGIIKAENPAETAHEYRVQGWNAYLEKCS 475          
BLAST of CX672163 vs. ExPASy Swiss-Prot
Match: PYR5_HUMAN (Uridine 5'-monophosphate synthase OS=Homo sapiens GN=UMPS PE=1 SV=1)

HSP 1 Score: 164.466 bits (415), Expect = 5.603e-40
Identity = 84/155 (54.19%), Postives = 105/155 (67.74%), Query Frame = -1
Query:  279 GGIFRILDWADIINAHIISGPGIVDXXXXXXXXXXXXXXXLAEMSSAGNLAKGDYTAAAVKIAEDHSDFVIGFISVNPASWPGAPVNPAFIQATPGVQMVKGGDDLGQQYNTPYSVIYDRGSDIIIVGRGIIKAADPALAAREYRLQGWEAYLAK 743
            GGIF+I  WAD++NAH++ G G+V                +AEMSS G+LA GDYT AAV++AE+HS+FV+GFIS +  S     + P F+  TPGVQ+  GGD+LGQQYN+P  VI  RGSDIIIVGRGII AAD   AA  YR   WEAYL++
Sbjct:  328 GGIFKIASWADLVNAHVVPGSGVVKGLQEVGLPLHRGCLLIAEMSSTGSLATGDYTRAAVRMAEEHSEFVVGFISGSRVS-----MKPEFLHLTPGVQLEAGGDNLGQQYNSPQEVIGKRGSDIIIVGRGIISAADRLEAAEMYRKAAWEAYLSR 477          
BLAST of CX672163 vs. ExPASy Swiss-Prot
Match: PYR5_PONAB (Uridine 5'-monophosphate synthase OS=Pongo abelii GN=UMPS PE=2 SV=1)

HSP 1 Score: 163.696 bits (413), Expect = 9.558e-40
Identity = 83/155 (53.55%), Postives = 105/155 (67.74%), Query Frame = -1
Query:  279 GGIFRILDWADIINAHIISGPGIVDXXXXXXXXXXXXXXXLAEMSSAGNLAKGDYTAAAVKIAEDHSDFVIGFISVNPASWPGAPVNPAFIQATPGVQMVKGGDDLGQQYNTPYSVIYDRGSDIIIVGRGIIKAADPALAAREYRLQGWEAYLAK 743
            GG+F+I  WAD++NAH++ G G+V                +AEMSS G+LA GDYT AAV++AE+HS+FV+GFIS +  S     + P F+  TPGVQ+  GGD+LGQQYN+P  VI  RGSDIIIVGRGII AAD   AA  YR   WEAYL++
Sbjct:  328 GGVFKIASWADLVNAHVVPGSGVVKGLQEVGLPLHRGCLLIAEMSSTGSLATGDYTRAAVRMAEEHSEFVVGFISGSRVS-----MKPEFLHLTPGVQLEAGGDNLGQQYNSPQEVIGKRGSDIIIVGRGIISAADCLEAAEMYRKAAWEAYLSR 477          
BLAST of CX672163 vs. ExPASy Swiss-Prot
Match: PYR5_BOVIN (Uridine 5'-monophosphate synthase OS=Bos taurus GN=UMPS PE=2 SV=1)

HSP 1 Score: 157.147 bits (396), Expect = 8.946e-38
Identity = 81/155 (52.26%), Postives = 104/155 (67.10%), Query Frame = -1
Query:  279 GGIFRILDWADIINAHIISGPGIVDXXXXXXXXXXXXXXXLAEMSSAGNLAKGDYTAAAVKIAEDHSDFVIGFISVNPASWPGAPVNPAFIQATPGVQMVKGGDDLGQQYNTPYSVIYDRGSDIIIVGRGIIKAADPALAAREYRLQGWEAYLAK 743
            GG+F+I  WAD++NAH + G G+V                +AEMSSAG LA G YT AAV++AE+HS+FVIGFIS +  S     + P F+  TPGVQ+  GGD+LGQQY++P  VI  RGSDIIIVGRGII +A+   AA+ YR   WEAYL++
Sbjct:  328 GGVFKIASWADLVNAHAVPGSGVVKGLEEVGLPLHRACLLVAEMSSAGTLATGSYTEAAVQMAEEHSEFVIGFISGSRVS-----MKPEFLHLTPGVQLEAGGDNLGQQYHSPQEVIGKRGSDIIIVGRGIIASANQLEAAKMYRKAAWEAYLSR 477          
BLAST of CX672163 vs. ExPASy Swiss-Prot
Match: PYR5_MOUSE (Uridine 5'-monophosphate synthase OS=Mus musculus GN=Umps PE=2 SV=3)

HSP 1 Score: 153.295 bits (386), Expect = 1.292e-36
Identity = 80/154 (51.95%), Postives = 101/154 (65.58%), Query Frame = -1
Query:  279 GIFRILDWADIINAHIISGPGIVDXXXXXXXXXXXXXXXLAEMSSAGNLAKGDYTAAAVKIAEDHSDFVIGFISVNPASWPGAPVNPAFIQATPGVQMVKGGDDLGQQYNTPYSVIYDRGSDIIIVGRGIIKAADPALAAREYRLQGWEAYLAK 740
            G F+I  WADI+NAH++ G G+V                +AEMSSAG+LA G+YT AAV +AE+H +FVIGFIS +  S     + P F+  TPGVQ+  GGD LGQQYN+P  VI  RGSD+IIVGRGI+ AA+   AA  YR   WEAYL++
Sbjct:  329 GTFKIASWADIVNAHVVPGSGVVKGLQEVGLPLHRACLLIAEMSSAGSLATGNYTKAAVGMAEEHCEFVIGFISGSRVS-----MKPEFLHLTPGVQLETGGDHLGQQYNSPQEVIGKRGSDVIIVGRGILAAANRLEAAEMYRKAAWEAYLSR 477          
BLAST of CX672163 vs. ExPASy Swiss-Prot
Match: PYRF_PENCH (Orotidine 5'-phosphate decarboxylase OS=Penicillium chrysogenum GN=pyrG PE=3 SV=1)

HSP 1 Score: 122.479 bits (306), Expect = 2.442e-27
Identity = 72/163 (44.17%), Postives = 92/163 (56.44%), Query Frame = -1
Query:  279 GIFRILDWADIINAHIISGPGIVDXXXXXXXXXXXXXXXL------AEMSSAGNLAKGDYTAAAVKIAEDHSDFVIGFIS---VNPASWPGAPVNPAFIQATPGVQMVKGGDDLGQQYNTPYSVIYDRGSDIIIVGRGIIKAADPALAAREYRLQGWEAYLAK 740
            G  RI +WA IIN  I+ G GIV+                      AEM+S G+LA G YT+A+V IA  +  FV+GF+S   +       AP +  F+  T GV +   GD LGQQY TP S +  RG+D II GRGI  AADP  AA++Y+ QGWEAYLA+
Sbjct:  113 GTLRISEWAHIINCSILPGEGIVEALAQTAQATDFPYGSERGLLILAEMTSKGSLATGAYTSASVDIARKYPSFVLGFVSTRSLGEVESTEAPASEDFVVFTTGVNLSSKGDKLGQQYQTPQSAV-GRGADFIISGRGIYAAADPVEAAKQYQQQGWEAYLAR 274          
BLAST of CX672163 vs. ExPASy Swiss-Prot
Match: PYRF_PENNA (Orotidine 5'-phosphate decarboxylase OS=Penicillium nalgiovense GN=pyrG PE=3 SV=1)

HSP 1 Score: 120.168 bits (300), Expect = 1.212e-26
Identity = 72/164 (43.90%), Postives = 91/164 (55.49%), Query Frame = -1
Query:  279 GIFRILDWADIINAHIISGPGIVDXXXXXXXXXXXXXXXL------AEMSSAGNLAKGDYTAAAVKIAEDHSDFVIGFISVNPASWPGAPVNPA----FIQATPGVQMVKGGDDLGQQYNTPYSVIYDRGSDIIIVGRGIIKAADPALAAREYRLQGWEAYLAK 740
            G  RI +WA IIN  I+ G GIV+                      AEM+S G+LA G YT+A+V IA  +  FV+GF+S        +   PA    F+  T GV +   GD LGQQY TP S +  RG+D II GRGI  AADP  AA++Y+ QGWEAYLA+
Sbjct:  110 GTLRISEWAHIINCSILPGEGIVEALAQTAQATDFPYGSERGLLILAEMTSKGSLATGAYTSASVDIARKYPSFVLGFVSTRSLGEVESTEAPAQGEDFVVFTTGVNLSSKGDKLGQQYQTPQSAV-GRGADFIISGRGIYAAADPVEAAKQYQQQGWEAYLAR 272          
BLAST of CX672163 vs. ExPASy Swiss-Prot
Match: PYRF_PENCA (Orotidine 5'-phosphate decarboxylase OS=Penicillium camembertii GN=pyrG PE=3 SV=1)

HSP 1 Score: 120.168 bits (300), Expect = 1.212e-26
Identity = 72/164 (43.90%), Postives = 90/164 (54.88%), Query Frame = -1
Query:  279 GIFRILDWADIINAHIISGPGIVDXXXXXXXXXXXXXXXL------AEMSSAGNLAKGDYTAAAVKIAEDHSDFVIGFISVNPASWPGAPVNPA----FIQATPGVQMVKGGDDLGQQYNTPYSVIYDRGSDIIIVGRGIIKAADPALAAREYRLQGWEAYLAK 740
            G  RI +WA IIN  ++ G GIV                       AEM+S G+LA G YT+A+V IA  +  FV+GF+S        +   PA    F+  T GV +   GD LGQQY TP S I  RG+D II GRGI  AADP  AA++Y+ QGWEAYLA+
Sbjct:  110 GTLRISEWAHIINCSVLPGEGIVQALAQTAQATDFPYGSERGLLILAEMTSKGSLATGSYTSASVDIARKYPSFVLGFVSTRSLGEVESTEAPAQGEDFVVFTTGVNLSSKGDKLGQQYQTPQSAI-GRGADFIISGRGIYAAADPVEAAKQYQQQGWEAYLAR 272          
BLAST of CX672163 vs. ExPASy Swiss-Prot
Match: PYRF_AURPU (Orotidine 5'-phosphate decarboxylase OS=Aureobasidium pullulans GN=URA3 PE=3 SV=1)

HSP 1 Score: 119.013 bits (297), Expect = 2.700e-26
Identity = 71/152 (46.71%), Postives = 87/152 (57.24%), Query Frame = -1
Query:  288 GIFRILDWADIINAHIISGPGIVDXXXXXXXXXXXXXXXLAEMSSAGNLAKGDYTAAAVKIAEDHSDFVIGFISVNPAS-WPGAPVNPAFIQATPGVQMVKGGDDLGQQYNTPYSVIYDRGSDIIIVGRGIIKAADPALAAREYRLQGWEAY 740
            G  +I+ WA+IINAHI  GP I+                 AEMSSAGNL  G YT   V  A  + +FV+GFI+    +  PG      FI  TPGVQ+   GD LGQQYNTP  VI + G+DIIIVGRG+  A D    A EYR++ W+AY
Sbjct:  113 GPLQIVRWANIINAHIFPGPAIITALSQARPRCRQLLIL-AEMSSAGNLMTGSYTEQCVVEARKNPEFVMGFIAQRTLNEQPG----DNFITMTPGVQIGATGDGLGQQYNTPEKVIGEAGTDIIIVGRGVYGAQDKRAKAEEYRVRAWKAY 259          
The following BLAST results are available for this feature:
BLAST of CX672163 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 65
Match NameE-valueIdentityDescription
PYR5_TOBAC1.160e-6177.56Uridine 5'-monophosphate synthase (Fragment) OS=Ni... [more]
PYR5_ARATH2.048e-5873.25Uridine 5'-monophosphate synthase OS=Arabidopsis t... [more]
PYR5_HUMAN5.603e-4054.19Uridine 5'-monophosphate synthase OS=Homo sapiens ... [more]
PYR5_PONAB9.558e-4053.55Uridine 5'-monophosphate synthase OS=Pongo abelii ... [more]
PYR5_BOVIN8.946e-3852.26Uridine 5'-monophosphate synthase OS=Bos taurus GN... [more]
PYR5_MOUSE1.292e-3651.95Uridine 5'-monophosphate synthase OS=Mus musculus ... [more]
PYRF_PENCH2.442e-2744.17Orotidine 5'-phosphate decarboxylase OS=Penicilliu... [more]
PYRF_PENNA1.212e-2643.90Orotidine 5'-phosphate decarboxylase OS=Penicilliu... [more]
PYRF_PENCA1.212e-2643.90Orotidine 5'-phosphate decarboxylase OS=Penicilliu... [more]
PYRF_AURPU2.700e-2646.71Orotidine 5'-phosphate decarboxylase OS=Aureobasid... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS10_15D04_b Madame Vinous Sweet Orange Multiple Pathogen-Infected cDNA Library UCRCS10 Citrus sinensis cDNA clone UCRCS10-15D04-H7-6.b, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX672163 ID=CX672163; Name=CX672163; organism=Citrus sinensis; type=EST; length=743bp
TTTTTTTAACTCCAAACACCACGTTCATAAATTTCATATATTGTTGATAA
CACAACACTCAGAAATCTTGGAACCATGTTTCATTGGGAAAACCAGACAA
GCAGCATTACCAGACTTGAGAAGTTACTATAAGTACAATGCAGCCAAAAG
CTTCAAACTCTCTCGGTTTCATAAGACATACCAATGCATGGTATATTAAA
CAGAACTTGACTCATCTGTTCATTATCGCAACCGTTGAAGCGAGCAGAAG
TCCAGACCTAAATGGAGGATCAGCTGCACTTAGCCAAGTAGGCCTCCCAT
CCTTGAAGCCGGTACTCACGGGCTGCCAATGCAGGGTCTGCTGCCTTTAT
AATTCCACGACCCACAATAATTATGTCACTACCCCTATCGTAGATGACCG
AGTATGGAGTGTTATATTGTTGGCCTAGATCATCACCTCCCTTTACCATT
TGAACTCCAGGGGTTGCTTGAATAAAGGCTGGATTGACTGGTGCCCCTGG
CCATGATGCTGGATTAACTGAGATGAATCCAATGACAAAATCAGAATGAT
CCTCGGCAATTTTCACAGCTGCTGCTGTATAGTCTCCCTTTGCTAGGTTA
CCAGCTGAGCTCATCTCAGCCAGCAGCAACAGACCCCTACCACGAGGCAA
TCCCTTTAATTTCAGACCATCCACAATTCCCGGTCCAGAGATTATGTGAG
CATTTATTATATCGGCCCAATCCAATATACGAAATATACCACC
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