CX672154

Overview
NameCX672154
Unique NameCX672154
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length797
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CX672154 vs. ExPASy Swiss-Prot
Match: TIR1B_ORYSJ (Transport inhibitor response 1-like protein Os04g0395600 OS=Oryza sativa subsp. japonica GN=Os04g0395600 PE=2 SV=1)

HSP 1 Score: 278.1 bits (710), Expect = 3.905e-74
Identity = 140/236 (59.32%), Postives = 172/236 (72.88%), Query Frame = 1
Query:    1 VFPADPFDEEIIHGVTEEGFVAVSFGCRRLHYVLYFCRQMTNAAVATIVQNCPNFTHFRLCIMTPGLPDYLTNEPMDEAFGAVVKTCSKLQRLSVSGLLTDLTFEYIGKYAKNLETLSVAFAGRSDRGMQCVLEGCPKLRKLEIRDCPFGNEALLSGLEKYESMRSLWMSACNVTMNACRRLAKQMPRLNVEVMKE-DGSDDSQ--------ADKVYIYRTVAGPRRDAPPSVLTL 681
            VFP+D F       VTEEG VAVS GC +L+ +LYFC QMTNAA+ T+ +NCPNFT FRLCI+ PG PD +T++P+DE FGA+V+ C  LQRLS+SGLLTD  F YIGKYAK LE LS+AFAG SD+GM  V+ GC  LRKLEIRD PFG+ ALL    +YE+MRSLWMS+CNVT+  C+ LA +MP LNVEV+ E DGS++ +         +K+Y+YRT AG R DAP  V  L
Sbjct:  341 VFPSD-FYVAGYSAVTEEGLVAVSLGCPKLNSLLYFCHQMTNAALVTVAKNCPNFTRFRLCILEPGKPDVVTSQPLDEGFGAIVRECKGLQRLSISGLLTDKVFMYIGKYAKQLEMLSIAFAGDSDKGMMHVMNGCKNLRKLEIRDSPFGDAALLGNFARYETMRSLWMSSCNVTLKGCQVLASKMPMLNVEVINERDGSNEMEENHGDLPKVEKLYVYRTTAGARDDAPNFVKIL 575          
BLAST of CX672154 vs. ExPASy Swiss-Prot
Match: TIR1_ARATH (Protein TRANSPORT INHIBITOR RESPONSE 1 OS=Arabidopsis thaliana GN=TIR1 PE=1 SV=2)

HSP 1 Score: 276.944 bits (707), Expect = 8.700e-74
Identity = 138/226 (61.06%), Postives = 170/226 (75.22%), Query Frame = 1
Query:    1 VFPADPFDEEIIHGVTEEGFVAVSFGCRRLHYVLYFCRQMTNAAVATIVQNCPNFTHFRLCIMTPGLPDYLTNEPMDEAFGAVVKTCSKLQRLSVSGLLTDLTFEYIGKYAKNLETLSVAFAGRSDRGMQCVLEGCPKLRKLEIRDCPFGNEALLSGLEKYESMRSLWMSACNVTMNACRRLAKQMPRLNVEVMKEDGSDDSQ-----ADKVYIYRTVAGPRRDAP 663
            VFP++PF  E    +TE+G V+VS GC +L  VLYFCRQMTNAA+ TI +N PN T FRLCI+ P  PDYLT EP+D  FGA+V+ C  L+RLS+SGLLTD  FEYIG YAK +E LSVAFAG SD GM  VL GC  LRKLEIRDCPFG++ALL+   K E+MRSLWMS+C+V+  AC+ L ++MP+LNVEV+ E G+ DS+      ++V+IYRTVAGPR D P
Sbjct:  345 VFPSEPFVMEPNVALTEQGLVSVSMGCPKLESVLYFCRQMTNAALITIARNRPNMTRFRLCIIEPKAPDYLTLEPLDIGFGAIVEHCKDLRRLSLSGLLTDKVFEYIGTYAKKMEMLSVAFAGDSDLGMHHVLSGCDSLRKLEIRDCPFGDKALLANASKLETMRSLWMSSCSVSFGACKLLGQKMPKLNVEVIDERGAPDSRPESCPVERVFIYRTVAGPRFDMP 570          
BLAST of CX672154 vs. ExPASy Swiss-Prot
Match: AFB2_ARATH (Protein AUXIN SIGNALING F-BOX 2 OS=Arabidopsis thaliana GN=AFB2 PE=1 SV=1)

HSP 1 Score: 273.863 bits (699), Expect = 7.365e-73
Identity = 136/240 (56.67%), Postives = 176/240 (73.33%), Query Frame = 1
Query:    1 VFPADPFDEEIIHG----VTEEGFVAVSFGCRRLHYVLYFCRQMTNAAVATIVQNCPNFTHFRLCIMTPGLPDYLTNEPMDEAFGAVVKTCSKLQRLSVSGLLTDLTFEYIGKYAKNLETLSVAFAGRSDRGMQCVLEGCPKLRKLEIRDCPFGNEALLSGLEKYESMRSLWMSACNVTMNACRRLAKQMPRLNVEV--------MKEDGSDDSQ-ADKVYIYRTVAGPRRDAPPSVLTL 681
            VFP+D     ++ G    VTEEG VA+S GC +LH +LYFC+QMTNAA+ T+ +NCPNF  FRLCI+ P  PD++T++P+DE FGA+VK C  L+RLS+SGLLTD  F YIG YA  LE LS+AFAG +D+GM  VL GC K++KLEIRD PFG+ ALL+ + KYE+MRSLWMS+C VT++ C+RLA++ P LNVE+        M+E+G +  Q  DK+Y+YRTV G R DAPP V  L
Sbjct:  341 VFPSD-----LLGGGNTAVTEEGLVAISAGCPKLHSILYFCQQMTNAALVTVAKNCPNFIRFRLCILEPNKPDHVTSQPLDEGFGAIVKACKSLRRLSLSGLLTDQVFLYIGMYANQLEMLSIAFAGDTDKGMLYVLNGCKKMKKLEIRDSPFGDTALLADVSKYETMRSLWMSSCEVTLSGCKRLAEKAPWLNVEIINENDNNRMEENGHEGRQKVDKLYLYRTVVGTRMDAPPFVWIL 575          
BLAST of CX672154 vs. ExPASy Swiss-Prot
Match: AFB3_ARATH (Protein AUXIN SIGNALING F-BOX 3 OS=Arabidopsis thaliana GN=AFB3 PE=1 SV=1)

HSP 1 Score: 271.166 bits (692), Expect = 4.774e-72
Identity = 133/237 (56.12%), Postives = 171/237 (72.15%), Query Frame = 1
Query:    1 VFPADPFDEEIIHG-VTEEGFVAVSFGCRRLHYVLYFCRQMTNAAVATIVQNCPNFTHFRLCIMTPGLPDYLTNEPMDEAFGAVVKTCSKLQRLSVSGLLTDLTFEYIGKYAKNLETLSVAFAGRSDRGMQCVLEGCPKLRKLEIRDCPFGNEALLSGLEKYESMRSLWMSACNVTMNACRRLAKQMPRLNVEVMKE---------DGSDDSQADKVYIYRTVAGPRRDAPPSVLTL 681
            VFP+D   EE  +  VTE G VA+S GC +LH +LYFC+QMTNAA+  + +NCPNF  FRLCI+ P  PD++T + +DE FGA+V+ C  L+RLSVSGLLTD  F YIG YA+ LE LS+AFAG +D+GM  VL GC K+RKLEIRD PFGN ALL+ + +YE+MRSLWMS+C VT+  C+RLA+  PRLNVE++ E         +  +  + DK+Y+YRTV G R+DAPP V  L
Sbjct:  341 VFPSDVHGEEDNNASVTEVGLVAISAGCPKLHSILYFCKQMTNAALIAVAKNCPNFIRFRLCILEPHKPDHITFQSLDEGFGAIVQACKGLRRLSVSGLLTDQVFLYIGMYAEQLEMLSIAFAGDTDKGMLYVLNGCKKMRKLEIRDSPFGNAALLADVGRYETMRSLWMSSCEVTLGGCKRLAQNSPRLNVEIINENENNGMEQNEEDEREKVDKLYLYRTVVGTRKDAPPYVRIL 577          
BLAST of CX672154 vs. ExPASy Swiss-Prot
Match: TIRC_ORYSJ (Transport inhibitor response 1-like protein Os11g0515500 OS=Oryza sativa subsp. japonica GN=Os11g0515500 PE=2 SV=1)

HSP 1 Score: 259.61 bits (662), Expect = 1.437e-68
Identity = 123/220 (55.91%), Postives = 161/220 (73.18%), Query Frame = 1
Query:   43 VTEEGFVAVSFGCRRLHYVLYFCRQMTNAAVATIVQNCPNFTHFRLCIMTPGLPDYLTNEPMDEAFGAVVKTCSKLQRLSVSGLLTDLTFEYIGKYAKNLETLSVAFAGRSDRGMQCVLEGCPKLRKLEIRDCPFGNEALLSGLEKYESMRSLWMSACNVTMNACRRLAKQMPRLNVEVMK--------EDGSDDSQADKVYIYRTVAGPRRDAPPSVLT 678
            VTEEG VA+S GC +L  VLYFC++MTN+A+ T+ +NCP FT FRLC++ PG  D +T +P+DE +GA+V++C  L+RL +SGLLTD  F YIG YA+ LE LSVAFAG +D GM  VL GC  L+KLEIRD PFG+ ALL+G+ +YE+MRSLW+S+CNVT+  C+ LA  M  LN+EVM         ++ +D  +  K+YIYRTVAGPR DAP  + T
Sbjct:  348 VTEEGLVAISAGCNKLQSVLYFCQRMTNSALITVAKNCPRFTSFRLCVLDPGSADAVTGQPLDEGYGAIVQSCKGLRRLCLSGLLTDTVFLYIGMYAERLEMLSVAFAGDTDDGMTYVLNGCKNLKKLEIRDSPFGDSALLAGMHQYEAMRSLWLSSCNVTLGGCKSLAASMANLNIEVMNRAASINEADNANDAKKVKKLYIYRTVAGPRGDAPEFIST 567          
BLAST of CX672154 vs. ExPASy Swiss-Prot
Match: TIR1A_ORYSJ (Transport inhibitor response 1-like protein Os05g0150500 OS=Oryza sativa subsp. japonica GN=Os05g0150500 PE=2 SV=1)

HSP 1 Score: 255.373 bits (651), Expect = 2.711e-67
Identity = 124/225 (55.11%), Postives = 162/225 (72.00%), Query Frame = 1
Query:    1 VFPADPFDEEIIHGVTEEGFVAVSFGCRRLHYVLYFCRQMTNAAVATIVQNCPNFTHFRLCIMTPGLPDYLTNEPMDEAFGAVVKTCSKLQRLSVSGLLTDLTFEYIGKYAKNLETLSVAFAGRSDRGMQCVLEGCPKLRKLEIRDCPFGNEALLSGLEKYESMRSLWMSACNVTMNACRRLAKQMPRLNVEVMKEDG--------SDDSQADKVYIYRTVAGPR 651
            VFP+DPF    +   TE G V VS  C  L  VLYFCR+MTN A+ TI +N PNFT FRLCI+ P  PDY+T EP+D  F A+V++C  L+RLS+SGLLTDL F+ IG +A  LE LS+AFAG SD G+  +L GC  L+KLEIRDCPFG++ LL+   K E+MRSLWMS+C +T+ ACR+LA++MPRL+VE+M + G         D++  +K+Y+YRT+AGPR
Sbjct:  359 VFPSDPFGAGFL---TERGLVDVSASCPMLESVLYFCRRMTNEALITIAKNRPNFTCFRLCILEPHTPDYITREPLDAGFSAIVESCRGLRRLSISGLLTDLVFKSIGAHADRLEMLSIAFAGNSDLGLHYILSGCKSLKKLEIRDCPFGDKPLLANAAKLETMRSLWMSSCLLTLGACRQLARKMPRLSVEIMNDPGRSCPLDSLPDETPVEKLYVYRTIAGPR 580          
BLAST of CX672154 vs. ExPASy Swiss-Prot
Match: TIR1L_ARATH (Transport inhibitor response 1-like protein OS=Arabidopsis thaliana GN=At5g49980 PE=1 SV=1)

HSP 1 Score: 248.44 bits (633), Expect = 3.314e-65
Identity = 123/229 (53.71%), Postives = 164/229 (71.62%), Query Frame = 1
Query:    1 VFPADPFDEEIIHGVTEEGFVAVSFGCRRLHYVLYFCRQMTNAAVATIVQNCPNFTHFRLCIMTPGLPDYLTNEPMDEAFGAVVKTCSKLQRLSVSGLLTDLTFEYIGKYAKNLETLSVAFAGRSDRGMQCVLEGCPKLRKLEIRDCPFGNEALLSGLEKYESMRSLWMSACNVTMNACRRLAKQMPRLNVEVMKEDGSDDSQ--ADKVYIYRTVAGPRRDAPPSVLTL 681
            +FP DP  E+    V+E G  A+S GCR+L  +LYFC++MTNAAV  + +NCP  T FRLCIM    PD++T +PMDE FGA+VK C KL RL+VSGLLTD  F Y+G+Y K + TLSVAFAG SD  ++ VLEGCP+L+KLEIRD PFG+ AL SG+ +Y +MR +WMSAC+++   C+ +A+ MP L VEV+  D  DD++   + +Y+YR++ GPR DAP  V  L
Sbjct:  392 IFPFDP-REDSEGPVSELGLQAISEGCRKLESILYFCQRMTNAAVIAMSENCPELTVFRLCIMGRHRPDHVTGKPMDEGFGAIVKNCKKLTRLAVSGLLTDQAFRYMGEYGKLVRTLSVAFAGDSDMALRHVLEGCPRLQKLEIRDSPFGDVALRSGMHRYYNMRFVWMSACSLSKGCCKDIARAMPNLVVEVIGSDDDDDNRDYVETLYMYRSLDGPRNDAPKFVTIL 619          
BLAST of CX672154 vs. ExPASy Swiss-Prot
Match: GRH1_ARATH (GRR1-like protein 1 OS=Arabidopsis thaliana GN=GRH1 PE=1 SV=1)

HSP 1 Score: 244.973 bits (624), Expect = 3.664e-64
Identity = 124/231 (53.68%), Postives = 161/231 (69.70%), Query Frame = 1
Query:    1 VFPADPFDEEIIHGVTEEGFVAVSFGCRRLHYVLYFCRQMTNAAVATIVQNCPNFTHFRLCIMTPGLPDYLTNEPMDEAFGAVVKTCSKLQRLSVSGLLTDLTFEYIGKYAKNLETLSVAFAGRSDRGMQCVLEGCPKLRKLEIRDCPFGNEALLSGLEKYESMRSLWMSACNVTMNACRRLAKQMPRLNVEVM----KEDGSDDSQADKVYIYRTVAGPRRDAPPSVLTL 681
            VFP++P  +     +TE+G V VS GCR+L  VLYFC Q TNAA+ TI +  PN   FRLC++ P  PDY TNEP+D+ F A+ + C  L+RLSVSGLL+D  F+YIGK+AK +  LS+AFAG SD  +  +L GC  L+KLEIRDCPFG+ ALL    K E+MRSLWMS+C V+  AC+ L+++MPRLNVEV+     E   + S  +++YIYRTVAGPR D P  V T+
Sbjct:  341 VFPSEPDLDATNIPLTEQGLVFVSKGCRKLESVLYFCVQFTNAALFTIARKRPNLKCFRLCVIEPFAPDYKTNEPLDKGFKAIAEGCRDLRRLSVSGLLSDKAFKYIGKHAKKVRMLSIAFAGDSDLMLHHLLSGCESLKKLEIRDCPFGDTALLEHAAKLETMRSLWMSSCFVSFGACKLLSQKMPRLNVEVIDEHPPESRPESSPVERIYIYRTVAGPRMDTPEFVWTI 571          
BLAST of CX672154 vs. ExPASy Swiss-Prot
Match: FBX14_ARATH (F-box protein FBX14 OS=Arabidopsis thaliana GN=FBX14 PE=1 SV=1)

HSP 1 Score: 241.121 bits (614), Expect = 5.290e-63
Identity = 118/233 (50.64%), Postives = 158/233 (67.81%), Query Frame = 1
Query:    1 VFPADPFDEEIIHGVTEEGFVAVSFGCRRLHYVLYFCRQMTNAAVATIVQNCPNFTHFRLCIMTPGLPDYLTNEPMDEAFGAVVKTCSKLQRLSVSGLLTDLTFEYIGKYAKNLETLSVAFAGRSDRGMQCVLEGCPKLRKLEIRDCPFGNEALLSGLEKYESMRSLWMSACNVTMNACRRLAKQMPRLNVEVMKEDGSDDSQ------ADKVYIYRTVAGPRRDAPPSVLTL 681
            +FP DP  E+    V+  G  A+S GCR+L  +LYFC+ MTN AV  + +NCP  T FRLCIM    PD++T +PMD+ FGA+VK C KL RL+VSGLLTD  F YIG+Y K + TLSVAFAG SD+ ++ VLEGCPKL+KLEIRD PFG+  L SG+ +Y +MR +W+S+C ++   CR ++  +P + VEV   DG DD         + +Y+YR++ GPR+DAP  V  L
Sbjct:  392 IFPFDP-REDSEGPVSGVGLQAISEGCRKLESILYFCQNMTNGAVTAMSENCPQLTVFRLCIMGRHRPDHVTGKPMDDGFGAIVKNCKKLTRLAVSGLLTDEAFSYIGEYGKLIRTLSVAFAGNSDKALRYVLEGCPKLQKLEIRDSPFGDVGLRSGMHRYSNMRFVWLSSCLISRGGCRGVSHALPNVVVEVFGADGDDDEDTVTGDYVETLYLYRSLDGPRKDAPKFVTIL 623          
BLAST of CX672154 vs. ExPASy Swiss-Prot
Match: COI1_ARATH (Coronatine-insensitive protein 1 OS=Arabidopsis thaliana GN=COI1 PE=1 SV=1)

HSP 1 Score: 110.538 bits (275), Expect = 1.078e-23
Identity = 68/233 (29.18%), Postives = 116/233 (49.79%), Query Frame = 1
Query:   22 DEEIIHGVTEEGFVAVSFGCRRLHYVLYFCRQMTNAAVATIVQNCPNFTHFRLCIMTPGLPDYLTNEPMDEAFGAVVKTCSKLQRLSV---SGLLTDLTFEYIGKYAKNLETLSVAFAGRSDRGMQCVLEGCPKLRKLEIRDCPFGNEALLSGLEKYESMRSLWMSACNVTMNACRRLAKQMPRLNVEV--------MKEDGSDDSQADKVYI--YRTVAGPRRDAPPSVLTL 681
            DEE +  V++ G +A++ GC+ L Y+  +   +TN ++ +I     N   FRL ++     + +T+ P+D    +++  C KL+R +     G LTDL   YIG+Y+ N+  + + + G SD G+     GCP L+KLE+R C F   A+ + + K  S+R LW+     +M     +    P  N+E+        + + G         +I  Y ++AG R D P +V  L
Sbjct:  360 DEEGL--VSQRGLIALAQGCQELEYMAVYVSDITNESLESIGTYLKNLCDFRLVLLDR--EERITDLPLDNGVRSLLIGCKKLRRFAFYLRQGGLTDLGLSYIGQYSPNVRWMLLGYVGESDEGLMEFSRGCPNLQKLEMRGCCFSERAIAAAVTKLPSLRYLWVQGYRASMTGQDLMQMARPYWNIELIPSRRVPEVNQQGEIREMEHPAHILAYYSLAGQRTDCPTTVRVL 588          
The following BLAST results are available for this feature:
BLAST of CX672154 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 10
Match NameE-valueIdentityDescription
TIR1B_ORYSJ3.905e-7459.32Transport inhibitor response 1-like protein Os04g0... [more]
TIR1_ARATH8.700e-7461.06Protein TRANSPORT INHIBITOR RESPONSE 1 OS=Arabidop... [more]
AFB2_ARATH7.365e-7356.67Protein AUXIN SIGNALING F-BOX 2 OS=Arabidopsis tha... [more]
AFB3_ARATH4.774e-7256.12Protein AUXIN SIGNALING F-BOX 3 OS=Arabidopsis tha... [more]
TIRC_ORYSJ1.437e-6855.91Transport inhibitor response 1-like protein Os11g0... [more]
TIR1A_ORYSJ2.711e-6755.11Transport inhibitor response 1-like protein Os05g0... [more]
TIR1L_ARATH3.314e-6553.71Transport inhibitor response 1-like protein OS=Ara... [more]
GRH1_ARATH3.664e-6453.68GRR1-like protein 1 OS=Arabidopsis thaliana GN=GRH... [more]
FBX14_ARATH5.290e-6350.64F-box protein FBX14 OS=Arabidopsis thaliana GN=FBX... [more]
COI1_ARATH1.078e-2329.18Coronatine-insensitive protein 1 OS=Arabidopsis th... [more]
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Properties
Property NameValue
Genbank descriptionUCRCS10_15C08_g Madame Vinous Sweet Orange Multiple Pathogen-Infected cDNA Library UCRCS10 Citrus sinensis cDNA clone UCRCS10-15C08-F15-5.g, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX672154 ID=CX672154; Name=CX672154; organism=Citrus sinensis; type=EST; length=797bp
GTTTTCCCTGCTGATCCCTTTGACGAGGAAATCATCCATGGGGTTACTGA
AGAAGGGTTTGTTGCTGTTTCTTTTGGCTGTCGGAGACTCCACTATGTTC
TTTACTTTTGTCGGCAGATGACCAATGCTGCTGTGGCAACAATTGTGCAG
AATTGCCCCAATTTCACCCACTTCCGTCTCTGCATAATGACTCCAGGACT
ACCTGATTACCTGACCAATGAACCCATGGATGAGGCTTTTGGTGCAGTGG
TGAAGACTTGCAGTAAACTCCAACGACTTTCAGTTTCAGGTCTCTTAACT
GACCTGACATTTGAGTACATTGGAAAGTATGCCAAAAATTTGGAAACCCT
CTCAGTAGCTTTTGCTGGGAGGAGTGATAGGGGGATGCAGTGTGTGCTGG
AAGGCTGTCCAAAGCTAAGGAAACTTGAGATAAGGGATTGCCCATTTGGG
AATGAAGCACTGCTGTCAGGTTTGGAGAAGTACGAATCTATGAGATCACT
TTGGATGTCAGCCTGCAATGTGACGATGAATGCTTGTAGGCGATTGGCAA
AGCAGATGCCCAGGTTGAATGTTGAGGTGATGAAGGAAGATGGAAGTGAT
GACAGTCAAGCTGATAAGGTTTACATATATCGAACTGTTGCTGGGCCAAG
AAGGGATGCCCCTCCATCTGTGCTCACTCTCTGATGTATCAGAAATAATA
AGTCGGCTTTCCAGCTTTCGCGGAGTACAAGTTTCCCTCATCCAGACGCG
GGGTCAAGTTCATACTATTGAATATATGATGAGGGTGAGGAAAAGGA
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