CX672154
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CX672154 vs. ExPASy Swiss-Prot
Match: TIR1B_ORYSJ (Transport inhibitor response 1-like protein Os04g0395600 OS=Oryza sativa subsp. japonica GN=Os04g0395600 PE=2 SV=1) HSP 1 Score: 278.1 bits (710), Expect = 3.905e-74 Identity = 140/236 (59.32%), Postives = 172/236 (72.88%), Query Frame = 1 Query: 1 VFPADPFDEEIIHGVTEEGFVAVSFGCRRLHYVLYFCRQMTNAAVATIVQNCPNFTHFRLCIMTPGLPDYLTNEPMDEAFGAVVKTCSKLQRLSVSGLLTDLTFEYIGKYAKNLETLSVAFAGRSDRGMQCVLEGCPKLRKLEIRDCPFGNEALLSGLEKYESMRSLWMSACNVTMNACRRLAKQMPRLNVEVMKE-DGSDDSQ--------ADKVYIYRTVAGPRRDAPPSVLTL 681 VFP+D F VTEEG VAVS GC +L+ +LYFC QMTNAA+ T+ +NCPNFT FRLCI+ PG PD +T++P+DE FGA+V+ C LQRLS+SGLLTD F YIGKYAK LE LS+AFAG SD+GM V+ GC LRKLEIRD PFG+ ALL +YE+MRSLWMS+CNVT+ C+ LA +MP LNVEV+ E DGS++ + +K+Y+YRT AG R DAP V L Sbjct: 341 VFPSD-FYVAGYSAVTEEGLVAVSLGCPKLNSLLYFCHQMTNAALVTVAKNCPNFTRFRLCILEPGKPDVVTSQPLDEGFGAIVRECKGLQRLSISGLLTDKVFMYIGKYAKQLEMLSIAFAGDSDKGMMHVMNGCKNLRKLEIRDSPFGDAALLGNFARYETMRSLWMSSCNVTLKGCQVLASKMPMLNVEVINERDGSNEMEENHGDLPKVEKLYVYRTTAGARDDAPNFVKIL 575
BLAST of CX672154 vs. ExPASy Swiss-Prot
Match: TIR1_ARATH (Protein TRANSPORT INHIBITOR RESPONSE 1 OS=Arabidopsis thaliana GN=TIR1 PE=1 SV=2) HSP 1 Score: 276.944 bits (707), Expect = 8.700e-74 Identity = 138/226 (61.06%), Postives = 170/226 (75.22%), Query Frame = 1 Query: 1 VFPADPFDEEIIHGVTEEGFVAVSFGCRRLHYVLYFCRQMTNAAVATIVQNCPNFTHFRLCIMTPGLPDYLTNEPMDEAFGAVVKTCSKLQRLSVSGLLTDLTFEYIGKYAKNLETLSVAFAGRSDRGMQCVLEGCPKLRKLEIRDCPFGNEALLSGLEKYESMRSLWMSACNVTMNACRRLAKQMPRLNVEVMKEDGSDDSQ-----ADKVYIYRTVAGPRRDAP 663 VFP++PF E +TE+G V+VS GC +L VLYFCRQMTNAA+ TI +N PN T FRLCI+ P PDYLT EP+D FGA+V+ C L+RLS+SGLLTD FEYIG YAK +E LSVAFAG SD GM VL GC LRKLEIRDCPFG++ALL+ K E+MRSLWMS+C+V+ AC+ L ++MP+LNVEV+ E G+ DS+ ++V+IYRTVAGPR D P Sbjct: 345 VFPSEPFVMEPNVALTEQGLVSVSMGCPKLESVLYFCRQMTNAALITIARNRPNMTRFRLCIIEPKAPDYLTLEPLDIGFGAIVEHCKDLRRLSLSGLLTDKVFEYIGTYAKKMEMLSVAFAGDSDLGMHHVLSGCDSLRKLEIRDCPFGDKALLANASKLETMRSLWMSSCSVSFGACKLLGQKMPKLNVEVIDERGAPDSRPESCPVERVFIYRTVAGPRFDMP 570
BLAST of CX672154 vs. ExPASy Swiss-Prot
Match: AFB2_ARATH (Protein AUXIN SIGNALING F-BOX 2 OS=Arabidopsis thaliana GN=AFB2 PE=1 SV=1) HSP 1 Score: 273.863 bits (699), Expect = 7.365e-73 Identity = 136/240 (56.67%), Postives = 176/240 (73.33%), Query Frame = 1 Query: 1 VFPADPFDEEIIHG----VTEEGFVAVSFGCRRLHYVLYFCRQMTNAAVATIVQNCPNFTHFRLCIMTPGLPDYLTNEPMDEAFGAVVKTCSKLQRLSVSGLLTDLTFEYIGKYAKNLETLSVAFAGRSDRGMQCVLEGCPKLRKLEIRDCPFGNEALLSGLEKYESMRSLWMSACNVTMNACRRLAKQMPRLNVEV--------MKEDGSDDSQ-ADKVYIYRTVAGPRRDAPPSVLTL 681 VFP+D ++ G VTEEG VA+S GC +LH +LYFC+QMTNAA+ T+ +NCPNF FRLCI+ P PD++T++P+DE FGA+VK C L+RLS+SGLLTD F YIG YA LE LS+AFAG +D+GM VL GC K++KLEIRD PFG+ ALL+ + KYE+MRSLWMS+C VT++ C+RLA++ P LNVE+ M+E+G + Q DK+Y+YRTV G R DAPP V L Sbjct: 341 VFPSD-----LLGGGNTAVTEEGLVAISAGCPKLHSILYFCQQMTNAALVTVAKNCPNFIRFRLCILEPNKPDHVTSQPLDEGFGAIVKACKSLRRLSLSGLLTDQVFLYIGMYANQLEMLSIAFAGDTDKGMLYVLNGCKKMKKLEIRDSPFGDTALLADVSKYETMRSLWMSSCEVTLSGCKRLAEKAPWLNVEIINENDNNRMEENGHEGRQKVDKLYLYRTVVGTRMDAPPFVWIL 575
BLAST of CX672154 vs. ExPASy Swiss-Prot
Match: AFB3_ARATH (Protein AUXIN SIGNALING F-BOX 3 OS=Arabidopsis thaliana GN=AFB3 PE=1 SV=1) HSP 1 Score: 271.166 bits (692), Expect = 4.774e-72 Identity = 133/237 (56.12%), Postives = 171/237 (72.15%), Query Frame = 1 Query: 1 VFPADPFDEEIIHG-VTEEGFVAVSFGCRRLHYVLYFCRQMTNAAVATIVQNCPNFTHFRLCIMTPGLPDYLTNEPMDEAFGAVVKTCSKLQRLSVSGLLTDLTFEYIGKYAKNLETLSVAFAGRSDRGMQCVLEGCPKLRKLEIRDCPFGNEALLSGLEKYESMRSLWMSACNVTMNACRRLAKQMPRLNVEVMKE---------DGSDDSQADKVYIYRTVAGPRRDAPPSVLTL 681 VFP+D EE + VTE G VA+S GC +LH +LYFC+QMTNAA+ + +NCPNF FRLCI+ P PD++T + +DE FGA+V+ C L+RLSVSGLLTD F YIG YA+ LE LS+AFAG +D+GM VL GC K+RKLEIRD PFGN ALL+ + +YE+MRSLWMS+C VT+ C+RLA+ PRLNVE++ E + + + DK+Y+YRTV G R+DAPP V L Sbjct: 341 VFPSDVHGEEDNNASVTEVGLVAISAGCPKLHSILYFCKQMTNAALIAVAKNCPNFIRFRLCILEPHKPDHITFQSLDEGFGAIVQACKGLRRLSVSGLLTDQVFLYIGMYAEQLEMLSIAFAGDTDKGMLYVLNGCKKMRKLEIRDSPFGNAALLADVGRYETMRSLWMSSCEVTLGGCKRLAQNSPRLNVEIINENENNGMEQNEEDEREKVDKLYLYRTVVGTRKDAPPYVRIL 577
BLAST of CX672154 vs. ExPASy Swiss-Prot
Match: TIRC_ORYSJ (Transport inhibitor response 1-like protein Os11g0515500 OS=Oryza sativa subsp. japonica GN=Os11g0515500 PE=2 SV=1) HSP 1 Score: 259.61 bits (662), Expect = 1.437e-68 Identity = 123/220 (55.91%), Postives = 161/220 (73.18%), Query Frame = 1 Query: 43 VTEEGFVAVSFGCRRLHYVLYFCRQMTNAAVATIVQNCPNFTHFRLCIMTPGLPDYLTNEPMDEAFGAVVKTCSKLQRLSVSGLLTDLTFEYIGKYAKNLETLSVAFAGRSDRGMQCVLEGCPKLRKLEIRDCPFGNEALLSGLEKYESMRSLWMSACNVTMNACRRLAKQMPRLNVEVMK--------EDGSDDSQADKVYIYRTVAGPRRDAPPSVLT 678 VTEEG VA+S GC +L VLYFC++MTN+A+ T+ +NCP FT FRLC++ PG D +T +P+DE +GA+V++C L+RL +SGLLTD F YIG YA+ LE LSVAFAG +D GM VL GC L+KLEIRD PFG+ ALL+G+ +YE+MRSLW+S+CNVT+ C+ LA M LN+EVM ++ +D + K+YIYRTVAGPR DAP + T Sbjct: 348 VTEEGLVAISAGCNKLQSVLYFCQRMTNSALITVAKNCPRFTSFRLCVLDPGSADAVTGQPLDEGYGAIVQSCKGLRRLCLSGLLTDTVFLYIGMYAERLEMLSVAFAGDTDDGMTYVLNGCKNLKKLEIRDSPFGDSALLAGMHQYEAMRSLWLSSCNVTLGGCKSLAASMANLNIEVMNRAASINEADNANDAKKVKKLYIYRTVAGPRGDAPEFIST 567
BLAST of CX672154 vs. ExPASy Swiss-Prot
Match: TIR1A_ORYSJ (Transport inhibitor response 1-like protein Os05g0150500 OS=Oryza sativa subsp. japonica GN=Os05g0150500 PE=2 SV=1) HSP 1 Score: 255.373 bits (651), Expect = 2.711e-67 Identity = 124/225 (55.11%), Postives = 162/225 (72.00%), Query Frame = 1 Query: 1 VFPADPFDEEIIHGVTEEGFVAVSFGCRRLHYVLYFCRQMTNAAVATIVQNCPNFTHFRLCIMTPGLPDYLTNEPMDEAFGAVVKTCSKLQRLSVSGLLTDLTFEYIGKYAKNLETLSVAFAGRSDRGMQCVLEGCPKLRKLEIRDCPFGNEALLSGLEKYESMRSLWMSACNVTMNACRRLAKQMPRLNVEVMKEDG--------SDDSQADKVYIYRTVAGPR 651 VFP+DPF + TE G V VS C L VLYFCR+MTN A+ TI +N PNFT FRLCI+ P PDY+T EP+D F A+V++C L+RLS+SGLLTDL F+ IG +A LE LS+AFAG SD G+ +L GC L+KLEIRDCPFG++ LL+ K E+MRSLWMS+C +T+ ACR+LA++MPRL+VE+M + G D++ +K+Y+YRT+AGPR Sbjct: 359 VFPSDPFGAGFL---TERGLVDVSASCPMLESVLYFCRRMTNEALITIAKNRPNFTCFRLCILEPHTPDYITREPLDAGFSAIVESCRGLRRLSISGLLTDLVFKSIGAHADRLEMLSIAFAGNSDLGLHYILSGCKSLKKLEIRDCPFGDKPLLANAAKLETMRSLWMSSCLLTLGACRQLARKMPRLSVEIMNDPGRSCPLDSLPDETPVEKLYVYRTIAGPR 580
BLAST of CX672154 vs. ExPASy Swiss-Prot
Match: TIR1L_ARATH (Transport inhibitor response 1-like protein OS=Arabidopsis thaliana GN=At5g49980 PE=1 SV=1) HSP 1 Score: 248.44 bits (633), Expect = 3.314e-65 Identity = 123/229 (53.71%), Postives = 164/229 (71.62%), Query Frame = 1 Query: 1 VFPADPFDEEIIHGVTEEGFVAVSFGCRRLHYVLYFCRQMTNAAVATIVQNCPNFTHFRLCIMTPGLPDYLTNEPMDEAFGAVVKTCSKLQRLSVSGLLTDLTFEYIGKYAKNLETLSVAFAGRSDRGMQCVLEGCPKLRKLEIRDCPFGNEALLSGLEKYESMRSLWMSACNVTMNACRRLAKQMPRLNVEVMKEDGSDDSQ--ADKVYIYRTVAGPRRDAPPSVLTL 681 +FP DP E+ V+E G A+S GCR+L +LYFC++MTNAAV + +NCP T FRLCIM PD++T +PMDE FGA+VK C KL RL+VSGLLTD F Y+G+Y K + TLSVAFAG SD ++ VLEGCP+L+KLEIRD PFG+ AL SG+ +Y +MR +WMSAC+++ C+ +A+ MP L VEV+ D DD++ + +Y+YR++ GPR DAP V L Sbjct: 392 IFPFDP-REDSEGPVSELGLQAISEGCRKLESILYFCQRMTNAAVIAMSENCPELTVFRLCIMGRHRPDHVTGKPMDEGFGAIVKNCKKLTRLAVSGLLTDQAFRYMGEYGKLVRTLSVAFAGDSDMALRHVLEGCPRLQKLEIRDSPFGDVALRSGMHRYYNMRFVWMSACSLSKGCCKDIARAMPNLVVEVIGSDDDDDNRDYVETLYMYRSLDGPRNDAPKFVTIL 619
BLAST of CX672154 vs. ExPASy Swiss-Prot
Match: GRH1_ARATH (GRR1-like protein 1 OS=Arabidopsis thaliana GN=GRH1 PE=1 SV=1) HSP 1 Score: 244.973 bits (624), Expect = 3.664e-64 Identity = 124/231 (53.68%), Postives = 161/231 (69.70%), Query Frame = 1 Query: 1 VFPADPFDEEIIHGVTEEGFVAVSFGCRRLHYVLYFCRQMTNAAVATIVQNCPNFTHFRLCIMTPGLPDYLTNEPMDEAFGAVVKTCSKLQRLSVSGLLTDLTFEYIGKYAKNLETLSVAFAGRSDRGMQCVLEGCPKLRKLEIRDCPFGNEALLSGLEKYESMRSLWMSACNVTMNACRRLAKQMPRLNVEVM----KEDGSDDSQADKVYIYRTVAGPRRDAPPSVLTL 681 VFP++P + +TE+G V VS GCR+L VLYFC Q TNAA+ TI + PN FRLC++ P PDY TNEP+D+ F A+ + C L+RLSVSGLL+D F+YIGK+AK + LS+AFAG SD + +L GC L+KLEIRDCPFG+ ALL K E+MRSLWMS+C V+ AC+ L+++MPRLNVEV+ E + S +++YIYRTVAGPR D P V T+ Sbjct: 341 VFPSEPDLDATNIPLTEQGLVFVSKGCRKLESVLYFCVQFTNAALFTIARKRPNLKCFRLCVIEPFAPDYKTNEPLDKGFKAIAEGCRDLRRLSVSGLLSDKAFKYIGKHAKKVRMLSIAFAGDSDLMLHHLLSGCESLKKLEIRDCPFGDTALLEHAAKLETMRSLWMSSCFVSFGACKLLSQKMPRLNVEVIDEHPPESRPESSPVERIYIYRTVAGPRMDTPEFVWTI 571
BLAST of CX672154 vs. ExPASy Swiss-Prot
Match: FBX14_ARATH (F-box protein FBX14 OS=Arabidopsis thaliana GN=FBX14 PE=1 SV=1) HSP 1 Score: 241.121 bits (614), Expect = 5.290e-63 Identity = 118/233 (50.64%), Postives = 158/233 (67.81%), Query Frame = 1 Query: 1 VFPADPFDEEIIHGVTEEGFVAVSFGCRRLHYVLYFCRQMTNAAVATIVQNCPNFTHFRLCIMTPGLPDYLTNEPMDEAFGAVVKTCSKLQRLSVSGLLTDLTFEYIGKYAKNLETLSVAFAGRSDRGMQCVLEGCPKLRKLEIRDCPFGNEALLSGLEKYESMRSLWMSACNVTMNACRRLAKQMPRLNVEVMKEDGSDDSQ------ADKVYIYRTVAGPRRDAPPSVLTL 681 +FP DP E+ V+ G A+S GCR+L +LYFC+ MTN AV + +NCP T FRLCIM PD++T +PMD+ FGA+VK C KL RL+VSGLLTD F YIG+Y K + TLSVAFAG SD+ ++ VLEGCPKL+KLEIRD PFG+ L SG+ +Y +MR +W+S+C ++ CR ++ +P + VEV DG DD + +Y+YR++ GPR+DAP V L Sbjct: 392 IFPFDP-REDSEGPVSGVGLQAISEGCRKLESILYFCQNMTNGAVTAMSENCPQLTVFRLCIMGRHRPDHVTGKPMDDGFGAIVKNCKKLTRLAVSGLLTDEAFSYIGEYGKLIRTLSVAFAGNSDKALRYVLEGCPKLQKLEIRDSPFGDVGLRSGMHRYSNMRFVWLSSCLISRGGCRGVSHALPNVVVEVFGADGDDDEDTVTGDYVETLYLYRSLDGPRKDAPKFVTIL 623
BLAST of CX672154 vs. ExPASy Swiss-Prot
Match: COI1_ARATH (Coronatine-insensitive protein 1 OS=Arabidopsis thaliana GN=COI1 PE=1 SV=1) HSP 1 Score: 110.538 bits (275), Expect = 1.078e-23 Identity = 68/233 (29.18%), Postives = 116/233 (49.79%), Query Frame = 1 Query: 22 DEEIIHGVTEEGFVAVSFGCRRLHYVLYFCRQMTNAAVATIVQNCPNFTHFRLCIMTPGLPDYLTNEPMDEAFGAVVKTCSKLQRLSV---SGLLTDLTFEYIGKYAKNLETLSVAFAGRSDRGMQCVLEGCPKLRKLEIRDCPFGNEALLSGLEKYESMRSLWMSACNVTMNACRRLAKQMPRLNVEV--------MKEDGSDDSQADKVYI--YRTVAGPRRDAPPSVLTL 681 DEE + V++ G +A++ GC+ L Y+ + +TN ++ +I N FRL ++ + +T+ P+D +++ C KL+R + G LTDL YIG+Y+ N+ + + + G SD G+ GCP L+KLE+R C F A+ + + K S+R LW+ +M + P N+E+ + + G +I Y ++AG R D P +V L Sbjct: 360 DEEGL--VSQRGLIALAQGCQELEYMAVYVSDITNESLESIGTYLKNLCDFRLVLLDR--EERITDLPLDNGVRSLLIGCKKLRRFAFYLRQGGLTDLGLSYIGQYSPNVRWMLLGYVGESDEGLMEFSRGCPNLQKLEMRGCCFSERAIAAAVTKLPSLRYLWVQGYRASMTGQDLMQMARPYWNIELIPSRRVPEVNQQGEIREMEHPAHILAYYSLAGQRTDCPTTVRVL 588 The following BLAST results are available for this feature:
BLAST of CX672154 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 10
Properties
Sequences
The
following sequences are available for this feature:
EST sequence >CX672154 ID=CX672154; Name=CX672154; organism=Citrus sinensis; type=EST; length=797bpback to top |