EY664670

Overview
NameEY664670
Unique NameEY664670
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length520
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of EY664670 vs. ExPASy Swiss-Prot
Match: USP_PEA (UDP-sugar pyrophospharylase OS=Pisum sativum GN=USP PE=1 SV=1)

HSP 1 Score: 112.464 bits (280), Expect = 1.242e-24
Identity = 51/72 (70.83%), Postives = 61/72 (84.72%), Query Frame = 2
Query:    2 ENLSLNGALIIDSVDDAEVRVGGKVQNKGWTLEPVDHKDTSVPEEIRIRGFKINKLEQLERSYSEPGKFSLK 217
            ENLS++GALI+D+VDDAEV V G VQN GW LEPVD+KD+S PE +RIRGFK NK+EQ+E+ YSEPGKF  K
Sbjct:  528 ENLSVDGALIVDAVDDAEVNVSGSVQNNGWALEPVDYKDSSEPEVLRIRGFKFNKVEQVEKKYSEPGKFDFK 599          
BLAST of EY664670 vs. ExPASy Swiss-Prot
Match: USP1_SOYBN (UDP-sugar pyrophosphorylase 1 OS=Glycine max GN=USP1 PE=1 SV=1)

HSP 1 Score: 110.923 bits (276), Expect = 3.612e-24
Identity = 53/72 (73.61%), Postives = 59/72 (81.94%), Query Frame = 2
Query:    2 ENLSLNGALIIDSVDDAEVRVGGKVQNKGWTLEPVDHKDTSVPEEIRIRGFKINKLEQLERSYSEPGKFSLK 217
            ENLS++GALIID+VDDAEV V G VQN GW LE VD+KD S PE +RIRGFK NK+EQLE  YSEPGKF LK
Sbjct:  528 ENLSVDGALIIDAVDDAEVNVSGSVQNNGWVLETVDYKDASEPEVLRIRGFKFNKIEQLETKYSEPGKFHLK 599          
BLAST of EY664670 vs. ExPASy Swiss-Prot
Match: USP_ARATH (UDP-sugar pyrophosphorylase OS=Arabidopsis thaliana GN=USP PE=1 SV=1)

HSP 1 Score: 110.538 bits (275), Expect = 4.718e-24
Identity = 48/72 (66.67%), Postives = 66/72 (91.67%), Query Frame = 2
Query:    2 ENLSLNGALIIDSVDDAEVRVGGKVQNKGWTLEPVDHKDTSVPEEIRIRGFKINKLEQLERSYSEPGKFSLK 217
            ++LSL+GALI+DS+DDAEV++GG ++N GWT+E VD+KDTSVPEEIRIRGF+ NK+EQLE+  ++PGKFS++
Sbjct:  542 KDLSLDGALIVDSIDDAEVKLGGLIKNNGWTMESVDYKDTSVPEEIRIRGFRFNKVEQLEKKLTQPGKFSVE 613          
BLAST of EY664670 vs. ExPASy Swiss-Prot
Match: USP_CUCME (UDP-sugar pyrophospharylase OS=Cucumis melo GN=USP PE=1 SV=1)

HSP 1 Score: 95.1301 bits (235), Expect = 2.051e-19
Identity = 44/62 (70.97%), Postives = 56/62 (90.32%), Query Frame = 2
Query:    2 ENLSLNGALIIDSVDDAEVRVGGKVQNKGWTLEPVDHKDTSVPEEIRIRGFKINKLEQLERS 187
            ++LSL+G LI+++ +DAEV+V G V NKGWTLEPVD+KDTSVPEEIRIRGF+INK+EQ ER+
Sbjct:  553 KDLSLDGTLIVNADEDAEVKVEGSVHNKGWTLEPVDYKDTSVPEEIRIRGFRINKIEQEERN 614          
BLAST of EY664670 vs. ExPASy Swiss-Prot
Match: USP_ORYSJ (UDP-sugar pyrophosphorylase OS=Oryza sativa subsp. japonica GN=USP PE=2 SV=1)

HSP 1 Score: 84.7297 bits (208), Expect = 2.772e-16
Identity = 38/63 (60.32%), Postives = 51/63 (80.95%), Query Frame = 2
Query:    2 ENLSLNGALIIDSVDDAEVRVGGKVQNKGWTLEPVDHKDTSVPEEIRIRGFKINKLEQLERSY 190
            + LSL+G LI+++ D+A+  V G ++NKGWT++ VDHKDTS  EEIRIRGFK NK+EQLE +Y
Sbjct:  554 QGLSLDGTLIVNAKDEAKFNVTGHIENKGWTIQHVDHKDTSEKEEIRIRGFKFNKVEQLELNY 616          
BLAST of EY664670 vs. ExPASy Swiss-Prot
Match: USP_ORYSI (UDP-sugar pyrophosphorylase OS=Oryza sativa subsp. indica GN=USP PE=3 SV=2)

HSP 1 Score: 84.7297 bits (208), Expect = 2.772e-16
Identity = 38/63 (60.32%), Postives = 51/63 (80.95%), Query Frame = 2
Query:    2 ENLSLNGALIIDSVDDAEVRVGGKVQNKGWTLEPVDHKDTSVPEEIRIRGFKINKLEQLERSY 190
            + LSL+G LI+++ D+A+  V G ++NKGWT++ VDHKDTS  EEIRIRGFK NK+EQLE +Y
Sbjct:  554 QGLSLDGTLIVNAKDEAKFNVTGHIENKGWTIQHVDHKDTSEKEEIRIRGFKFNKVEQLELNY 616          
The following BLAST results are available for this feature:
BLAST of EY664670 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 6
Match NameE-valueIdentityDescription
USP_PEA1.242e-2470.83UDP-sugar pyrophospharylase OS=Pisum sativum GN=US... [more]
USP1_SOYBN3.612e-2473.61UDP-sugar pyrophosphorylase 1 OS=Glycine max GN=US... [more]
USP_ARATH4.718e-2466.67UDP-sugar pyrophosphorylase OS=Arabidopsis thalian... [more]
USP_CUCME2.051e-1970.97UDP-sugar pyrophospharylase OS=Cucumis melo GN=USP... [more]
USP_ORYSJ2.772e-1660.32UDP-sugar pyrophosphorylase OS=Oryza sativa subsp.... [more]
USP_ORYSI2.772e-1660.32UDP-sugar pyrophosphorylase OS=Oryza sativa subsp.... [more]
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Properties
Property NameValue
Genbank descriptionCS00-C1-101-069-B04-CT.F Sweet orange leaf, infected with Xylella fastidiosa (stage 1 of 2) Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY664670 ID=EY664670; Name=EY664670; organism=Citrus sinensis; type=EST; length=520bp
AGAAAATCTTTCTTTGAATGGAGCTCTTATCATTGATTCTGTTGACGATG
CAGAGGTGAGAGTAGGAGGTAAAGTGCAGAACAAGGGCTGGACACTTGAA
CCTGTTGACCACAAAGATACTTCAGTGCCCGAGGAAATACGGATCCGGGG
TTTCAAGATCAACAAACTTGAGCAGCTGGAAAGGAGTTACAGTGAGCCCG
GCAAGTTTAGCTTGAAGCCTTGAAGGTTAACATGTACATTACAACTATTC
ATCTGACCTTTTGGGTCCAATTACTCTTTTAACTTGTAATGAGTTTTTAA
TCCCGTCACTCCCGGTGCCGGGATTAATGCCTTATTTCCCTGAGTAGTTA
TTCTGTAAAAGTTTGTCTTCGAACCAGTTTTCCTTCTGGAGATTATGGTA
TGCGTCTATTTAGGCTAAAAATGTTGCATACTCTTCATTTTTTCGATTCT
TTCTCATTCTAGACAAAGAATAAAATCTGTTCATAGTGTCAGATATTATA
TTCAAAAAAAAAAAAAAAAA
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