CX672150

Overview
NameCX672150
Unique NameCX672150
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length836
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CX672150 vs. ExPASy Swiss-Prot
Match: MAN7_ARATH (Mannan endo-1,4-beta-mannosidase 7 OS=Arabidopsis thaliana GN=MAN7 PE=2 SV=1)

HSP 1 Score: 330.102 bits (845), Expect = 9.410e-90
Identity = 149/220 (67.73%), Postives = 181/220 (82.27%), Query Frame = 3
Query:  174 GFITAKGVHLMLNGSPFYANGFNAYWLMNTGANPYLKDKVSSVFQQAKEHGLSMARTWAFSDGGDSPLQYSPGSYNEQMFQGLDFVISEARKYGIKLVLSMVNNYDQFGGKKQYVNWARGQGQSISSDDDFFTNSVVKQYYKNHIKTVLTRINTVTGVAYKDEPTIMAWELMNEPRCYADPSGKTIQDWITEMASYVKSIDGNHLLEAGLEGFYGPSSSE 833
            GF+  KGV   LNG P+YANGFNAYWLM   ++P  + K+S+ FQ A  HGL++ARTWAFSDGG   LQYSPGSYNE MFQGLDF ++EAR++GIK++LS  NNY+ FGG+KQYV+WAR +G+ +SS+DDFFT+S+VK +YKNHIK VL R NT T V YKD+PTIMAWELMNEPRC +DPSG+ IQ WITEMA++VKS+D NHLLEAGLEGFYG SS +
Sbjct:   30 GFVRTKGVQFSLNGYPYYANGFNAYWLMYVASDPSQRSKISTAFQDASRHGLTVARTWAFSDGGYRALQYSPGSYNEDMFQGLDFALAEARRHGIKIILSFANNYESFGGRKQYVDWARSRGRPVSSEDDFFTDSLVKDFYKNHIKAVLNRFNTFTKVHYKDDPTIMAWELMNEPRCPSDPSGRAIQAWITEMAAHVKSLDRNHLLEAGLEGFYGQSSPQ 249          
BLAST of CX672150 vs. ExPASy Swiss-Prot
Match: MAN1_ORYSJ (Mannan endo-1,4-beta-mannosidase 1 OS=Oryza sativa subsp. japonica GN=MAN1 PE=2 SV=2)

HSP 1 Score: 328.946 bits (842), Expect = 2.096e-89
Identity = 151/222 (68.02%), Postives = 186/222 (83.78%), Query Frame = 3
Query:  174 GFITAKGVHLMLNGSPFYANGFNAYWLMNTGANPYLKDKVSSVFQQAKEHGLSMARTWAFSDGGD-SPLQYSPGSYNEQMFQGLDFVISEARKYGIKLVLSMVNNYDQFGGKKQYVNWARGQGQSISSDDDFFTNSVVKQYYKNHIKTVLTRINTVTGVAYKDEPTIMAWELMNEPRCYADPSGKTIQDWITEMASYVKSIDGNHLLEAGLEGFYGPSSSEK 836
            GF+ A+G   +L+G+P+YANGFNAYWLM   A+P  + KVS+   +A  HGL++ARTWAFSDGG  + LQ SPG+YNE  F+GLDFV+SEARKYGIK++LS+V+NYD FGG+KQYVNWAR QGQ I SDD+FFTN VVK +YKNH+KTVLTR NT+TGVAY+D+PTI+AWELMNEPRC +D SG+T+Q WITEMA++VKSID NH+LE GLEGFYG SS  +
Sbjct:   36 GFVRAQGTRFVLDGNPYYANGFNAYWLMLLAADPSQRGKVSAALGEAAGHGLTVARTWAFSDGGGGNALQLSPGNYNENTFKGLDFVLSEARKYGIKVILSLVDNYDSFGGRKQYVNWARAQGQGIGSDDEFFTNPVVKGFYKNHVKTVLTRKNTITGVAYRDDPTILAWELMNEPRCQSDLSGRTVQSWITEMAAHVKSIDRNHMLEVGLEGFYGASSPSR 257          
BLAST of CX672150 vs. ExPASy Swiss-Prot
Match: MAN4_ORYSJ (Mannan endo-1,4-beta-mannosidase 4 OS=Oryza sativa subsp. japonica GN=MAN4 PE=2 SV=2)

HSP 1 Score: 310.071 bits (793), Expect = 1.008e-83
Identity = 140/226 (61.95%), Postives = 175/226 (77.43%), Query Frame = 3
Query:  159 VKADDGFITAKGVHLMLN-GSPFYANGFNAYWLMNTGANPYLKDKVSSVFQQAKEHGLSMARTWAFSDGGDSPLQYSPGSYNEQMFQGLDFVISEARKYGIKLVLSMVNNYDQFGGKKQYVNWARGQGQSISSDDDFFTNSVVKQYYKNHIKTVLTRINTVTGVAYKDEPTIMAWELMNEPRCYADPSGKTIQDWITEMASYVKSIDGNHLLEAGLEGFYGPSSSE 833
            V   DG +   G   +++ G   + +GFNAYWLM   A+P L+  V++ FQQA  HGL++ARTWAFSDGGD PLQ SPG YNE MFQGLDFVI+EAR++GI L+L + NN+D FGGK+QYV WA   G +++SDDDFFT+++VK Y+KNH+KTVLTR+NT+TGVAYKD+PTI AWELMNEPRCYADP+G  +Q W+ EMA YVKS+DG HL+  GLEGFYG    E
Sbjct:   17 VAPGDGMVAVDGTQFVVDCGRTIFFSGFNAYWLMMMAADPALRGAVATAFQQASAHGLNLARTWAFSDGGDQPLQSSPGVYNETMFQGLDFVIAEARRHGIYLLLCLTNNFDNFGGKRQYVRWAGDAGHNLTSDDDFFTSTIVKSYFKNHVKTVLTRVNTLTGVAYKDDPTIFAWELMNEPRCYADPTGAMVQAWVEEMAPYVKSVDGRHLVTPGLEGFYGAGEHE 242          
BLAST of CX672150 vs. ExPASy Swiss-Prot
Match: MAN5_SOLLC (Mannan endo-1,4-beta-mannosidase 5 OS=Solanum lycopersicum GN=MAN5 PE=2 SV=1)

HSP 1 Score: 307.76 bits (787), Expect = 5.001e-83
Identity = 142/223 (63.68%), Postives = 169/223 (75.78%), Query Frame = 3
Query:  168 DDGFITAKGVHLMLNGSPFYANGFNAYWLMNTGANPYLKDKVSSVFQQAKEHGLSMARTWAFSDGGDSPLQYSPGSYNEQMFQGLDFVISEARKYGIKLVLSMVNNYDQFGGKKQYVNWARGQGQSISSDDDFFTNSVVKQYYKNHIKTVLTRINTVTGVAYKDEPTIMAWELMNEPRCYADPSGKTIQDWITEMASYVKSIDGNHLLEAGLEGFYGPSSSEK 836
            D GF+   G H  LNGSPF  NGFN+YWLM+  A P  + KVS V ++A   GLS+ RTWAFSDGGD  LQ SPG Y+E++FQGLDFVISEA+KYGI+L+LS VNNY+ FGGK QYV WAR  G  I+ DDDF+TN + K YYKNHIK V+TR NT+TG+ YKD+ TIMAWELMNEPR  AD SG T+  W+ EMAS+VKS+D  HLLE G+EGFYG S  E+
Sbjct:   36 DQGFVRVNGAHFELNGSPFLFNGFNSYWLMHVAAEPSERYKVSEVLREASSAGLSVCRTWAFSDGGDRALQISPGVYDERVFQGLDFVISEAKKYGIRLILSFVNNYNDFGGKAQYVQWARNAGAQINGDDDFYTNYITKNYYKNHIKKVVTRFNTITGMTYKDDSTIMAWELMNEPRNQADYSGNTLNAWVQEMASFVKSLDNKHLLEIGMEGFYGDSVPER 258          
BLAST of CX672150 vs. ExPASy Swiss-Prot
Match: MAN4_SOLLC (Mannan endo-1,4-beta-mannosidase 4 OS=Solanum lycopersicum GN=MAN4 PE=1 SV=2)

HSP 1 Score: 307.76 bits (787), Expect = 5.001e-83
Identity = 139/218 (63.76%), Postives = 175/218 (80.28%), Query Frame = 3
Query:  165 ADDGFITAKGVHLMLNGSPFYANGFNAYWLMNTGANPYLKDKVSSVFQQAKEHGLSMARTWAFSDGGDSPLQYSPGSYNEQMFQGLDFVISEARKYGIKLVLSMVNNYDQFGGKKQYVNWARGQGQSISSDDDFFTNSVVKQYYKNHIKTVLTRINTVTGVAYKDEPTIMAWELMNEPRCYADPSGKTIQDWITEMASYVKSIDGNHLLEAGLEGFYG 818
            +++ F+   G H  LNG   Y NGFNAYWLM    +P  + KV++ FQQA ++ +++ARTWAFS GG  PLQ +PG YNEQMFQGLDFVISEA+KYGI L++S+VNN+D FGGKKQYV WA  +GQ ++SDDDFFTN +VK +YKN++K VLTR+NT+T VAYKD+PTI++WEL+NEPRC +D SGKT Q+W+ EMA Y+KSID NHLLE GLEGFYG
Sbjct:   28 SNNNFVYTDGTHFALNGKSLYINGFNAYWLMYIAYDPSTRIKVTNTFQQASKYKMNVARTWAFSHGGSRPLQSAPGVYNEQMFQGLDFVISEAKKYGIHLIMSLVNNWDAFGGKKQYVEWAVQRGQKLTSDDDFFTNPMVKGFYKNNVKVVLTRVNTITKVAYKDDPTILSWELINEPRCPSDLSGKTFQNWVLEMAGYLKSIDSNHLLEIGLEGFYG 245          
BLAST of CX672150 vs. ExPASy Swiss-Prot
Match: MAN2_SOLLC (Mannan endo-1,4-beta-mannosidase 2 OS=Solanum lycopersicum GN=MAN2 PE=2 SV=2)

HSP 1 Score: 307.76 bits (787), Expect = 5.001e-83
Identity = 142/223 (63.68%), Postives = 169/223 (75.78%), Query Frame = 3
Query:  168 DDGFITAKGVHLMLNGSPFYANGFNAYWLMNTGANPYLKDKVSSVFQQAKEHGLSMARTWAFSDGGDSPLQYSPGSYNEQMFQGLDFVISEARKYGIKLVLSMVNNYDQFGGKKQYVNWARGQGQSISSDDDFFTNSVVKQYYKNHIKTVLTRINTVTGVAYKDEPTIMAWELMNEPRCYADPSGKTIQDWITEMASYVKSIDGNHLLEAGLEGFYGPSSSEK 836
            D GF+   G H  LNGSPF  NGFN+YWLM+  A P  + KVS V ++A   GLS+ RTWAFSDGGD  LQ SPG Y+E++FQGLDFVISEA+KYGI+L+LS VNNY+ FGGK QYV WAR  G  I+ DDDF+TN + K YYKNHIK V+TR NT+TG+ YKD+ TIMAWELMNEPR  AD SG T+  W+ EMAS+VKS+D  HLLE G+EGFYG S  E+
Sbjct:   36 DQGFVRVNGAHFELNGSPFLFNGFNSYWLMHVAAEPSERYKVSEVLREASSAGLSVCRTWAFSDGGDRALQISPGVYDERVFQGLDFVISEAKKYGIRLILSFVNNYNDFGGKAQYVQWARNAGAQINGDDDFYTNYITKNYYKNHIKKVVTRFNTITGMTYKDDSTIMAWELMNEPRNQADYSGNTLNAWVQEMASFVKSLDNKHLLEIGMEGFYGDSVPER 258          
BLAST of CX672150 vs. ExPASy Swiss-Prot
Match: MAN3_ARATH (Mannan endo-1,4-beta-mannosidase 3 OS=Arabidopsis thaliana GN=MAN3 PE=2 SV=1)

HSP 1 Score: 304.679 bits (779), Expect = 4.234e-82
Identity = 135/228 (59.21%), Postives = 174/228 (76.32%), Query Frame = 3
Query:  153 IQVKADDGFITAKGVHLMLNGSPFYANGFNAYWLMNTGANPYLKDKVSSVFQQAKEHGLSMARTWAFSDGGDSPLQYSPGSYNEQMFQGLDFVISEARKYGIKLVLSMVNNYDQFGGKKQYVNWARGQGQSISSDDDFFTNSVVKQYYKNHIKTVLTRINTVTGVAYKDEPTIMAWELMNEPRCYADPSGKTIQDWITEMASYVKSIDGNHLLEAGLEGFYGPSSSEK 836
            ++  + DGF++ KGV  +LNG PFYANGFNAYWL     +   + K++ VFQ A  H L++ RTW F DGG   LQ +PG Y+E+ FQGLDF I+EA++ GIK++++ VNNY  FGG+KQYV+WA+  GQ++SSDDDF+TN +VKQYYKNH+KT++ R+NT T V YKDEPTIM WELMNEP+C ADPSGKT+  W+ EMA YVKS+D  HLL  GLEGFYG SS ++
Sbjct:   23 VKSASSDGFVSRKGVQFILNGKPFYANGFNAYWLAYEATDSTTRFKITYVFQNATIHDLTIVRTWGFRDGGYRALQIAPGVYDEKTFQGLDFAIAEAKRLGIKMIITFVNNYSDFGGRKQYVDWAKNTGQNVSSDDDFYTNPLVKQYYKNHVKTMVNRVNTFTKVEYKDEPTIMGWELMNEPQCRADPSGKTLTAWMNEMALYVKSVDSKHLLSTGLEGFYGDSSPQR 250          
BLAST of CX672150 vs. ExPASy Swiss-Prot
Match: MAN4_ARATH (Putative mannan endo-1,4-beta-mannosidase 4 OS=Arabidopsis thaliana GN=MAN4 PE=3 SV=1)

HSP 1 Score: 302.753 bits (774), Expect = 1.609e-81
Identity = 138/229 (60.26%), Postives = 175/229 (76.42%), Query Frame = 3
Query:  153 IQVKADDGFITAKGVHLMLNGSPFYANGFNAYWLMNTGANPYLKDKVSSVFQQAKEHGLSMARTWAFSDGGD-SPLQYSPGSYNEQMFQGLDFVISEARKYGIKLVLSMVNNYDQFGGKKQYVNWARGQGQSISSDDDFFTNSVVKQYYKNHIKTVLTRINTVTGVAYKDEPTIMAWELMNEPRCYADPSGKTIQDWITEMASYVKSIDGNHLLEAGLEGFYGPSSSEK 836
            ++    DGF++  GV  +LNG PFYANGFNAYWL     +P  + K+++VFQ A   GL++ARTW F DG     LQ +PGSY+EQ FQGLDFVI+EA++ GIKL++ +VNN+D +GGKKQYV+WAR +G+ +SS+DDF+ N V+K +YKNH+KTVL R+NT T VAYKDEP IMAW+LMNEPRC  D SGKT+ DWI EMA +VKS+D NHLL  G EGFYG SS E+
Sbjct:   21 VEAAPSDGFVSRNGVQFILNGKPFYANGFNAYWLAYEATDPTTRFKITNVFQNATSLGLTIARTWGFRDGAIYRALQTAPGSYDEQTFQGLDFVIAEAKRIGIKLIILLVNNWDDYGGKKQYVDWARSKGEVVSSNDDFYRNPVIKDFYKNHVKTVLNRVNTFTKVAYKDEPAIMAWQLMNEPRCGVDKSGKTLMDWINEMAPFVKSVDPNHLLSTGHEGFYGDSSPER 249          
BLAST of CX672150 vs. ExPASy Swiss-Prot
Match: MAN1_SOLLC (Mannan endo-1,4-beta-mannosidase 1 OS=Solanum lycopersicum GN=MAN1 PE=1 SV=2)

HSP 1 Score: 302.368 bits (773), Expect = 2.101e-81
Identity = 141/235 (60.00%), Postives = 181/235 (77.02%), Query Frame = 3
Query:  132 VFFIFLLIQVKADDGFITAKGVHLMLNGSPFYANGFNAYWLMNTGANPYLKDKVSSVFQQAKEHGLSMARTWAFSDGGDSPLQYSPGSYNEQMFQGLDFVISEARKYGIKLVLSMVNNYDQFGGKKQYVNWARGQGQSISSDDDFFTNSVVKQYYKNHIKTVLTRINTVTGVAYKDEPTIMAWELMNEPRCYADPSGKTIQDWITEMASYVKSIDGNHLLEAGLEGFYGPSSSEK 836
            +F +FL +  +A+ GFI  K  H  LNGSPF  NGFN+YWLM+  A+P  + KV+ V + A   GLS+ RTWAFSDGGD  LQ SPG Y+E++FQGLDFVI+EA+KYGI+L+LS VN ++ FGGK QYV WAR  G  IS+DD+F+T+ ++K+Y KNHI+ V+TR+N++T VAYKD+PTIMAWELMNEPR  AD SGKT+  W+ EMAS+VKS+D  HLLE G+EGFYG S  E+
Sbjct:   12 LFLLFLALVCEANSGFIGVKDSHFELNGSPFLFNGFNSYWLMHVAADPTERYKVTEVLKDASVAGLSVCRTWAFSDGGDRALQISPGIYDERVFQGLDFVIAEAKKYGIRLILSFVNQWNDFGGKAQYVWWARNAGAQISNDDEFYTHPMLKKYLKNHIEKVVTRLNSITKVAYKDDPTIMAWELMNEPRDQADYSGKTVNGWVQEMASFVKSLDNKHLLEVGMEGFYGDSIPER 246          
BLAST of CX672150 vs. ExPASy Swiss-Prot
Match: MAN9_ORYSJ (Putative mannan endo-1,4-beta-mannosidase 9 OS=Oryza sativa subsp. japonica GN=MAN9 PE=2 SV=2)

HSP 1 Score: 293.123 bits (749), Expect = 1.275e-78
Identity = 137/220 (62.27%), Postives = 166/220 (75.45%), Query Frame = 3
Query:  165 ADDGFITAKGVHLMLNGSPFYANGFNAYWLMNTGANPYLKDKVSSVFQQAKEHGLSMARTWAFSDGGDSPLQYSPGSYNEQMFQGLDFVISEARKYGIKLVLSMVNNYDQFGGKKQYVNWARGQGQSISSDDDFFTNSVVKQYYKNHIKTVLTRINTVTGVAYKDEPTIMAWELMNEPRCYADPSGKTIQDWITEMASYVKSIDGNHLLEAGLEGFYGPS 824
            A+  F  A G    + G PFY+NGFNAYWLM   ++P  + K + V QQA     ++ RTWAFSDGG  PLQ SPG YNE MF GLDFVI+EA+K G+ L+LS+VNN+D FGGKKQYV WAR QG ++ SDDDFF + V KQ+YKNH   VLTR+N +TGVAYKD+PTI AWEL+NEPRC +D SGKT+Q W+TEMA YVKS+D NH++E GLEGFYG S
Sbjct:   35 ANGQFARASGTRFTVGGRPFYSNGFNAYWLMYMASDPGDRSKAAGVLQQAASLRATLVRTWAFSDGGYRPLQKSPGVYNEDMFMGLDFVIAEAKKRGLYLILSLVNNWDGFGGKKQYVQWARDQGHNLGSDDDFFRSDVTKQFYKNH--AVLTRVNKITGVAYKDDPTIFAWELINEPRCQSDLSGKTLQAWVTEMAGYVKSVDPNHMVEIGLEGFYGES 252          
The following BLAST results are available for this feature:
BLAST of CX672150 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 22
Match NameE-valueIdentityDescription
MAN7_ARATH9.410e-9067.73Mannan endo-1,4-beta-mannosidase 7 OS=Arabidopsis ... [more]
MAN1_ORYSJ2.096e-8968.02Mannan endo-1,4-beta-mannosidase 1 OS=Oryza sativa... [more]
MAN4_ORYSJ1.008e-8361.95Mannan endo-1,4-beta-mannosidase 4 OS=Oryza sativa... [more]
MAN5_SOLLC5.001e-8363.68Mannan endo-1,4-beta-mannosidase 5 OS=Solanum lyco... [more]
MAN4_SOLLC5.001e-8363.76Mannan endo-1,4-beta-mannosidase 4 OS=Solanum lyco... [more]
MAN2_SOLLC5.001e-8363.68Mannan endo-1,4-beta-mannosidase 2 OS=Solanum lyco... [more]
MAN3_ARATH4.234e-8259.21Mannan endo-1,4-beta-mannosidase 3 OS=Arabidopsis ... [more]
MAN4_ARATH1.609e-8160.26Putative mannan endo-1,4-beta-mannosidase 4 OS=Ara... [more]
MAN1_SOLLC2.101e-8160.00Mannan endo-1,4-beta-mannosidase 1 OS=Solanum lyco... [more]
MAN9_ORYSJ1.275e-7862.27Putative mannan endo-1,4-beta-mannosidase 9 OS=Ory... [more]

Pages

back to top
Properties
Property NameValue
Genbank descriptionUCRCS10_15C06_g Madame Vinous Sweet Orange Multiple Pathogen-Infected cDNA Library UCRCS10 Citrus sinensis cDNA clone UCRCS10-15C06-F11-5.g, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX672150 ID=CX672150; Name=CX672150; organism=Citrus sinensis; type=EST; length=836bp
TACAAGCCTACACAAGCTAAGCATCTGAAAATCTTTGTTAGTTTGCTTGT
GGGAAGAAGAGGAAAGGAAAAAGGGAGGAAAAAAAGAAGAAGAAGAAGAA
GAAGAAAGAAATGATCAAGAAGTGGAGTCTGGTTTTCTTCATCTTTCTGT
TGATCCAAGTGAAAGCAGATGATGGGTTCATCACAGCCAAAGGAGTGCAC
CTAATGTTAAATGGAAGTCCATTTTATGCAAATGGATTCAATGCTTACTG
GCTCATGAACACTGGGGCTAATCCATATCTGAAAGACAAAGTTTCTTCCG
TGTTTCAACAAGCAAAAGAGCATGGCCTCTCAATGGCAAGAACTTGGGCT
TTTAGTGATGGTGGTGACAGCCCCCTGCAGTACTCTCCAGGGTCATATAA
CGAACAAATGTTCCAGGGATTGGATTTTGTAATATCTGAAGCAAGGAAAT
ATGGGATTAAGCTAGTACTGAGTATGGTGAATAATTATGATCAATTTGGA
GGGAAGAAGCAGTATGTGAATTGGGCAAGAGGTCAGGGGCAGTCTATTTC
AAGTGATGATGACTTCTTTACCAACTCTGTGGTGAAGCAATACTACAAGA
ATCATATCAAGACTGTTCTTACGAGAATAAACACTGTGACCGGAGTTGCT
TACAAAGATGAACCAACGATTATGGCTTGGGAGCTTATGAATGAGCCAAG
ATGTTATGCAGATCCATCGGGAAAAACCATTCAGGATTGGATTACAGAGA
TGGCTTCTTATGTAAAATCAATTGATGGAAATCACTTATTAGAAGCTGGT
TTAGAAGGGTTCTATGGACCATCGTCATCTGAGAAG
back to top