CX672149

Overview
NameCX672149
Unique NameCX672149
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length920
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CX672149 vs. ExPASy Swiss-Prot
Match: MAN7_ARATH (Mannan endo-1,4-beta-mannosidase 7 OS=Arabidopsis thaliana GN=MAN7 PE=2 SV=1)

HSP 1 Score: 260.381 bits (664), Expect = 1.053e-68
Identity = 125/210 (59.52%), Postives = 157/210 (74.76%), Query Frame = -1
Query:  297 ADPSGKTIQDWITEMASYVKSIDGNHLLEAGLEGFYGPSSSEKQQYNPNFQVGTDFIANNQIPGIDFATLHSYPDQWLPSSSDESQTSFLNNWLYNHIQDAQDTLRKPILLAEFGKSLKTSGAN--QRDQLFDTVYSAIYXXXXXXXXXXXGMFWQLFTEGLDSYRDGYEVIFSENPSTATIITDQSQKLNRIRKMYVRLRNVQKWKRAR 920
            +DPSG+ IQ WITEMA++VKS+D NHLLEAGLEGFYG SS + +  NP  Q GTDFIANN+IPGIDF T+HSYPD+W P SS++SQ  FLN WL  HIQDAQ+ L KPI+LAEFGKS+K  G    QRD +F+TVYS IY           G+FWQL   G+D+++DGY +I S++ ST  +I+ QS+KL  IRK++ R+ NV+KWKRAR
Sbjct:  208 SDPSGRAIQAWITEMAAHVKSLDRNHLLEAGLEGFYGQSSPQSKTLNPPGQFGTDFIANNRIPGIDFVTVHSYPDEWFPDSSEQSQMDFLNKWLDAHIQDAQNVLHKPIILAEFGKSMKKPGYTPAQRDIVFNTVYSKIYGSAKRGGAAAGGLFWQLLVNGIDNFQDGYGIILSQSSSTVNVISQQSRKLTLIRKIFARMINVEKWKRAR 417          
BLAST of CX672149 vs. ExPASy Swiss-Prot
Match: MAN1_ORYSJ (Mannan endo-1,4-beta-mannosidase 1 OS=Oryza sativa subsp. japonica GN=MAN1 PE=2 SV=2)

HSP 1 Score: 234.187 bits (596), Expect = 8.080e-61
Identity = 116/206 (56.31%), Postives = 144/206 (69.90%), Query Frame = -1
Query:  315 ADPSGKTIQDWITEMASYVKSIDGNHLLEAGLEGFYGPSSSEK-QQYNPN-FQVGTDFIANNQIPGIDFATLHSYPDQWLPSSSDESQTSFLNNWLYNHIQDAQDTLRKPILLAEFGKSLKTSG--ANQRDQLFDTVYSAIYXXXXXXXXXXXGMFWQLFTEGLDSYRDGYEVIFSENPSTATIITDQSQKLNRIRKMYVRLRNVQ 920
            +D SG+T+Q WITEMA++VKSID NH+LE GLEGFYG SS  +    NP+ +Q+GTDFIANNQ+PGIDFAT+HSYPDQWL    D++Q  F+  WL  HI DAQ  LRKP+L+AEFGKS K  G  + QRD L+ TVY+ IY           G+FWQL   G+DSYRDGYEV+F E PST  +IT  S++L  + K + R R  Q
Sbjct:  215 SDLSGRTVQSWITEMAAHVKSIDRNHMLEVGLEGFYGASSPSRIAAVNPSGYQLGTDFIANNQVPGIDFATVHSYPDQWLSGKDDQAQLGFMGRWLDAHIADAQAVLRKPLLIAEFGKSWKDPGYSSGQRDALYGTVYAKIYESARRGGATVGGLFWQLLVPGMDSYRDGYEVVFGETPSTTGVITTNSRRLRFLSKAFARARQAQ 420          
BLAST of CX672149 vs. ExPASy Swiss-Prot
Match: MAN5_SOLLC (Mannan endo-1,4-beta-mannosidase 5 OS=Solanum lycopersicum GN=MAN5 PE=2 SV=1)

HSP 1 Score: 199.134 bits (505), Expect = 2.880e-50
Identity = 94/193 (48.70%), Postives = 127/193 (65.80%), Query Frame = -1
Query:  348 ADPSGKTIQDWITEMASYVKSIDGNHLLEAGLEGFYGPSSSEKQQYNPNFQVGTDFIANNQIPGIDFATLHSYPDQWLPSSSDESQTSFLNNWLYNHIQDAQDTLRKPILLAEFGKSLKTSGANQ--RDQLFDTVYSAIYXXXXXXXXXXXGMFWQLFTEGLDSYRDGYEVIFSENPSTATIITDQSQKLNRI 920
            AD SG T+  W+ EMAS+VKS+D  HLLE G+EGFYG S  E++  NP +QVGTDFI+N+ I  IDFAT+H+Y DQWL   SD++Q  F+  W+ +H QDA++ L+KP++LAEFGKS +  G NQ  RD    T+Y  IY            + WQL  +G+++Y DGY +   +NPSTA IIT QS  +  +
Sbjct:  216 ADYSGNTLNAWVQEMASFVKSLDNKHLLEIGMEGFYGDSVPERKSINPGYQVGTDFISNHLIKEIDFATIHAYTDQWLSGQSDDAQMIFMQKWMTSHWQDAKNILKKPLVLAEFGKSSRDPGYNQNIRDTFMSTIYRNIYSLAKDGGTMGGSLIWQLVAQGMENYEDGYCIELGKNPSTAGIITSQSHAMTAL 408          
BLAST of CX672149 vs. ExPASy Swiss-Prot
Match: MAN2_SOLLC (Mannan endo-1,4-beta-mannosidase 2 OS=Solanum lycopersicum GN=MAN2 PE=2 SV=2)

HSP 1 Score: 199.134 bits (505), Expect = 2.880e-50
Identity = 94/193 (48.70%), Postives = 127/193 (65.80%), Query Frame = -1
Query:  348 ADPSGKTIQDWITEMASYVKSIDGNHLLEAGLEGFYGPSSSEKQQYNPNFQVGTDFIANNQIPGIDFATLHSYPDQWLPSSSDESQTSFLNNWLYNHIQDAQDTLRKPILLAEFGKSLKTSGANQ--RDQLFDTVYSAIYXXXXXXXXXXXGMFWQLFTEGLDSYRDGYEVIFSENPSTATIITDQSQKLNRI 920
            AD SG T+  W+ EMAS+VKS+D  HLLE G+EGFYG S  E++  NP +QVGTDFI+N+ I  IDFAT+H+Y DQWL   SD++Q  F+  W+ +H QDA++ L+KP++LAEFGKS +  G NQ  RD    T+Y  IY            + WQL  +G+++Y DGY +   +NPSTA IIT QS  +  +
Sbjct:  216 ADYSGNTLNAWVQEMASFVKSLDNKHLLEIGMEGFYGDSVPERKSINPGYQVGTDFISNHLIKEIDFATIHAYTDQWLSGQSDDAQMIFMQKWMTSHWQDAKNILKKPLVLAEFGKSSRDPGYNQNIRDTFMSTIYRNIYSLAKDGGTMGGSLIWQLVAQGMENYEDGYCIELGKNPSTAGIITSQSHAMTAL 408          
BLAST of CX672149 vs. ExPASy Swiss-Prot
Match: MAN9_ORYSJ (Putative mannan endo-1,4-beta-mannosidase 9 OS=Oryza sativa subsp. japonica GN=MAN9 PE=2 SV=2)

HSP 1 Score: 197.208 bits (500), Expect = 1.095e-49
Identity = 90/190 (47.37%), Postives = 128/190 (67.37%), Query Frame = -1
Query:  357 ADPSGKTIQDWITEMASYVKSIDGNHLLEAGLEGFYGPSSSEKQQYNPNFQVGTDFIANNQIPGIDFATLHSYPDQWLPSSSDESQTSFLNNWLYNHIQDAQDTLRKPILLAEFGKSLKTSG--ANQRDQLFDTVYSAIYXXXXXXXXXXXGMFWQLFTEGLDSYRDGYEVIFSENPSTATIITDQSQKL 920
            +D SGKT+Q W+TEMA YVKS+D NH++E GLEGFYG S  +   +NP + VGTDFIANN +P +DFAT+HSYPDQW+  +S + Q +F+  W+ +HI+D+   LRKP+L+ EFG S +++G     RD  F TVY A+Y           G+FWQ+   G++S+ DGYEV+   + STA ++  Q  ++
Sbjct:  214 SDLSGKTLQAWVTEMAGYVKSVDPNHMVEIGLEGFYGESMHKN--FNPGYTVGTDFIANNLVPAVDFATIHSYPDQWVSGASSDEQVAFMRKWMADHIRDSAAVLRKPLLVTEFGWSARSNGYTVAARDAYFRTVYDAVYASAREGGACAGGLFWQVMAPGMESWTDGYEVVLERSKSTADVVAHQCARI 401          
BLAST of CX672149 vs. ExPASy Swiss-Prot
Match: MAN4_SOLLC (Mannan endo-1,4-beta-mannosidase 4 OS=Solanum lycopersicum GN=MAN4 PE=1 SV=2)

HSP 1 Score: 193.356 bits (490), Expect = 1.581e-48
Identity = 93/194 (47.94%), Postives = 134/194 (69.07%), Query Frame = -1
Query:  348 ADPSGKTIQDWITEMASYVKSIDGNHLLEAGLEGFYGPSSSEKQQYNPNFQV-GTDFIANNQIPGIDFATLHSYPDQWLPSSSDESQTSFLNNWLYNHIQDAQDTLRKPILLAEFGKSLKTSG--ANQRDQLFDTVYSAIYXXXXXXXXXXXGMFWQLFTEGLDSYRDGYEVIFSENPSTATIITDQSQKLNRI 920
            +D SGKT Q+W+ EMA Y+KSID NHLLE GLEGFYG   ++ +QYNPN  + GT+FI+NNQ+ GIDF T+H YP+QWLP  + E+Q  + + W+  HI D++  L+KP+L+AEFGKS KT G    +RD  F+ +Y  I+           G+FWQ+  +G+ S+ DGY+V+  E+PST+ +I  QS +L+++
Sbjct:  209 SDLSGKTFQNWVLEMAGYLKSIDSNHLLEIGLEGFYG---NDMRQYNPNSYIFGTNFISNNQVQGIDFTTIHMYPNQWLPGLTQEAQDKWASQWIQVHIDDSK-MLKKPLLIAEFGKSTKTPGYTVAKRDNYFEKIYGTIFNCAKSGGPCGGGLFWQVLGQGMSSFDDGYQVVLQESPSTSRVILLQSLRLSKL 398          
BLAST of CX672149 vs. ExPASy Swiss-Prot
Match: MAN1_SOLLC (Mannan endo-1,4-beta-mannosidase 1 OS=Solanum lycopersicum GN=MAN1 PE=1 SV=2)

HSP 1 Score: 189.504 bits (480), Expect = 2.282e-47
Identity = 86/193 (44.56%), Postives = 126/193 (65.28%), Query Frame = -1
Query:  342 ADPSGKTIQDWITEMASYVKSIDGNHLLEAGLEGFYGPSSSEKQQYNPNFQVGTDFIANNQIPGIDFATLHSYPDQWLPSSSDESQTSFLNNWLYNHIQDAQDTLRKPILLAEFGKSLKTSGANQRDQLFDTVYSAIYXXXXXXXXXXXGMFWQLFTEGLDSYRDGYEVIFSENPSTATIITDQSQKLNRIRK 920
            AD SGKT+  W+ EMAS+VKS+D  HLLE G+EGFYG S  E++  NP +QVGTDFI+N+ I  IDFAT+H+Y DQW+   SD++Q  ++  W+ +H +DA++ L+KP++LAEFGKS  + G   RD    +VY  +Y            + WQL   G+++Y DGY ++  + PST  II+DQ+  +  + +
Sbjct:  204 ADYSGKTVNGWVQEMASFVKSLDNKHLLEVGMEGFYGDSIPERKSVNPGYQVGTDFISNHLINEIDFATIHAYTDQWVSGQSDDAQLVWMEKWITSHWEDARNILKKPLVLAEFGKS--SRGQGSRDIFMSSVYRNVYNLAKEGGTMAGSLVWQLMAHGMENYDDGYCIVLGQTPSTTQIISDQAHVMTALAR 394          
BLAST of CX672149 vs. ExPASy Swiss-Prot
Match: MAN3_SOLLC (Mannan endo-1,4-beta-mannosidase 3 OS=Solanum lycopersicum GN=MAN3 PE=3 SV=1)

HSP 1 Score: 188.734 bits (478), Expect = 3.893e-47
Identity = 89/186 (47.85%), Postives = 125/186 (67.20%), Query Frame = -1
Query:  366 ADPSGKTIQ-DWITEMASYVKSIDGNHLLEAGLEGFYGPSSSEKQQYNPNFQVGTDFIANNQIPGIDFATLHSYPDQWLPSSSDESQTSFLNNWLYNHIQDAQDTLRKPILLAEFGKSLKTSGANQRDQLFDTVYSAIYXXXXXXXXXXXGMFWQLFTEGLDSYRDGYEVIFSENPSTATIITDQS 920
            AD SGKT+   W+ EMAS+VKS+D  HLLE G+EGFYG S  E++  NP +QVGTDFI+N+ I  IDFAT+H+Y DQWL   SDE+Q +++  W+ +H +DA++ L+KP++LAEFGKS + SG   RD    +VY  +Y            + WQL   G+++Y DGY ++   NPST  II++Q+
Sbjct:  204 ADYSGKTVNVGWVQEMASFVKSLDNKHLLEVGMEGFYGDSIPERKLVNPGYQVGTDFISNHLINEIDFATIHAYTDQWLSGQSDEAQLAWMEKWIRSHWEDARNILKKPLVLAEFGKSSR-SGEGSRDIFMSSVYRNVYNLAKEGGTMGGSLVWQLMAHGMENYDDGYSIVLGLNPSTTQIISNQA 388          
BLAST of CX672149 vs. ExPASy Swiss-Prot
Match: MAN3_ARATH (Mannan endo-1,4-beta-mannosidase 3 OS=Arabidopsis thaliana GN=MAN3 PE=2 SV=1)

HSP 1 Score: 185.267 bits (469), Expect = 4.304e-46
Identity = 89/197 (45.18%), Postives = 128/197 (64.97%), Query Frame = -1
Query:  345 ADPSGKTIQDWITEMASYVKSIDGNHLLEAGLEGFYGPSSSE-KQQYNPNFQ--VGTDFIANNQIPGIDFATLHSYPDQWLPSSSDESQTSFLNNWLYNHIQDAQDTLRKPILLAEFGKSLKTSGAN--QRDQLFDTVYSAIYXXXXXXXXXXXGMFWQLFTEGLDSYRDGYEVIFSENPSTATIITDQSQKLNRIR 920
            ADPSGKT+  W+ EMA YVKS+D  HLL  GLEGFYG SS + K   NP     +GTDFIAN+++  IDFA++HSYPD W P+  ++S+ + L  WL  H++DAQ+ L+KP++L EFGK   T G    QRD +F+  +  IY            +FW + ++G+++++D   ++ SEN +T  IIT++S+KL  IR
Sbjct:  208 ADPSGKTLTAWMNEMALYVKSVDSKHLLSTGLEGFYGDSSPQRKTSLNPVAANVLGTDFIANHKLDAIDFASIHSYPDLWFPNLDEKSRLNLLRKWLECHLEDAQNILKKPLILGEFGKPTNTPGYTQAQRDAVFNATFDTIYESAEKGGPAAGALFWHVISDGMNNFKDPLSIVLSENSTTVNIITEESRKLGLIR 404          
BLAST of CX672149 vs. ExPASy Swiss-Prot
Match: MAN1_ARATH (Mannan endo-1,4-beta-mannosidase 1 OS=Arabidopsis thaliana GN=MAN1 PE=2 SV=1)

HSP 1 Score: 183.726 bits (465), Expect = 1.252e-45
Identity = 97/192 (50.52%), Postives = 120/192 (62.50%), Query Frame = -1
Query:  345 IQDWITEMASYVKSIDGNHLLEAGLEGFYGPSSSEKQQYNPNFQV--GTDFIANNQIPGIDFATLHSYPDQWLP--SSSDESQTSFLNNWLYNHIQDAQDTLRKPILLAEFGKSLKTSG--ANQRDQLFDTVYSAIYXXXXXXXXXXXGMFWQLFTEGLDSYRDGYEVIFSENP-STATIITDQSQKLNRIR 899
            +QDW+ EMASYVKSID NHLLE GLEGFYG S  E+  YNP  +V  GTDFI NNQIP IDFAT+H YPD WLP  SS    Q +F++ W+  HI+D  + ++KP+L+ EFGKS K  G    +R++ F  VY  IY           G+FWQL T       DGYEV     P +TA +I DQS KL  ++
Sbjct:  210 LQDWVKEMASYVKSIDSNHLLEIGLEGFYGESIPERTVYNPGGRVLTGTDFITNNQIPDIDFATIHIYPDSWLPLQSSRTGEQDTFVDRWIGAHIEDCDNIIKKPLLITEFGKSSKYPGFSLEKRNKFFQRVYDVIYDSARAGGSCTGGVFWQLTTNRTGLLGDGYEVFMQAGPNTTAQLIADQSSKLKNLK 401          
The following BLAST results are available for this feature:
BLAST of CX672149 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 22
Match NameE-valueIdentityDescription
MAN7_ARATH1.053e-6859.52Mannan endo-1,4-beta-mannosidase 7 OS=Arabidopsis ... [more]
MAN1_ORYSJ8.080e-6156.31Mannan endo-1,4-beta-mannosidase 1 OS=Oryza sativa... [more]
MAN5_SOLLC2.880e-5048.70Mannan endo-1,4-beta-mannosidase 5 OS=Solanum lyco... [more]
MAN2_SOLLC2.880e-5048.70Mannan endo-1,4-beta-mannosidase 2 OS=Solanum lyco... [more]
MAN9_ORYSJ1.095e-4947.37Putative mannan endo-1,4-beta-mannosidase 9 OS=Ory... [more]
MAN4_SOLLC1.581e-4847.94Mannan endo-1,4-beta-mannosidase 4 OS=Solanum lyco... [more]
MAN1_SOLLC2.282e-4744.56Mannan endo-1,4-beta-mannosidase 1 OS=Solanum lyco... [more]
MAN3_SOLLC3.893e-4747.85Mannan endo-1,4-beta-mannosidase 3 OS=Solanum lyco... [more]
MAN3_ARATH4.304e-4645.18Mannan endo-1,4-beta-mannosidase 3 OS=Arabidopsis ... [more]
MAN1_ARATH1.252e-4550.52Mannan endo-1,4-beta-mannosidase 1 OS=Arabidopsis ... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS10_15C06_b Madame Vinous Sweet Orange Multiple Pathogen-Infected cDNA Library UCRCS10 Citrus sinensis cDNA clone UCRCS10-15C06-F11-6.b, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX672149 ID=CX672149; Name=CX672149; organism=Citrus sinensis; type=EST; length=920bp
TTTTTTTTTTTTTTTTTAAAAAAATGGGTAAACTCCATACAATTTATAAA
TAACACAATCCAATTAATCGTACTTTCGATAAACTCGCATAGAATTTATA
AATAACACAATTCTATTAATCATACTTTCTTGGACAAACCAAATCCATCT
CTAAGAGAGAATTCACTTCCTCAGGACACTATGAAATTTCAGTAGCATTC
AAGTTAGGAAACATCAAATTATCAAGCCTATTTGTTTTGTCAGTTGCCGG
TGCCATTGCTGCCGTTCCCAGCCCACCATTGAGCTCTTCTGATATCCCTG
GCTCTCTTCCATTTCTGAACGTTTCTCAGTCTGACATACATCTTTCGAAT
TCGATTGAGCTTCTGAGATTGGTCAGTGATGATGGTTGCAGTCGAGGGGT
TCTCACTGAAGATCACCTCATACCCATCACGGTAAGAGTCTAATCCTTCG
GTAAAAAGTTGCCAGAACATGCCACCAACAGCTGCACCGCCACTCCTGGC
TGACGAATAAATTGCCGAGTAGACCGTATCAAACAGCTGGTCCCTTTGGT
TGGCACCAGAGGTTTTCAAAGATTTTCCAAACTCCGCTAAGAGAATTGGC
TTCCGAAGAGTGTCCTGTGCATCTTGGATATGATTGTAGAGCCAATTGTT
CAAGAATGAAGTTTGGCTTTCATCACTGGAGCTGGGAAGCCATTGATCTG
GATAAGAATGAAGTGTAGCAAAATCAATGCCGGGAATTTGATTGTTTGCA
ATGAAATCTGTTCCTACTTGAAAATTTGGATTGTATTGCTGCTTCTCAGA
TGACGATGGTCCATAGAACCCTTCTAAACCAGCTTCTAATAAGTGATTTC
CATCAATTGATTTTACATAAGAAGCCATCTCTGTAATCCAATCCTGAATG
GTTTTTCCCGATGGATCTGC
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