CX672147

Overview
NameCX672147
Unique NameCX672147
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length520
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CX672147 vs. ExPASy Swiss-Prot
Match: GSTF3_ARATH (Glutathione S-transferase ERD13 OS=Arabidopsis thaliana GN=ERD13 PE=1 SV=3)

HSP 1 Score: 117.087 bits (292), Expect = 5.041e-26
Identity = 57/100 (57.00%), Postives = 69/100 (69.00%), Query Frame = -2
Query:  217 PPIYQRTTQIFFFGKRGLPADENLIKERGEKLGKVFDVYGGGLFKSKYLAGDFFSRGDLSPLPFTQYLVGPMGKGFLFRDRKHVSAWGDDFSNRPSWKKV 516
            PP+   T  I F    G PADE +IKE  EKL +V DVY   L K++YLAGDF S  DL+ LPFT+YLVGP+GK  L +DRKHVSAW D  S+R +WK+V
Sbjct:  108 PPLLALTLNIVFAPLMGFPADEKVIKESEEKLAEVLDVYEAQLSKNEYLAGDFVSLADLAHLPFTEYLVGPIGKAHLIKDRKHVSAWWDKISSRAAWKEV 207          
BLAST of CX672147 vs. ExPASy Swiss-Prot
Match: GST11_ARATH (Glutathione S-transferase 11 OS=Arabidopsis thaliana GN=GST11 PE=1 SV=3)

HSP 1 Score: 73.9442 bits (180), Expect = 4.893e-13
Identity = 41/84 (48.81%), Postives = 53/84 (63.10%), Query Frame = -2
Query:  217 GLPADENLIKERGEKLGKVFDVYGGGLFKSKYLAGDFFSRGDLSPLPFTQYLVGPMGKGFLFRDRKHVSAWGDDFSNRPSWKKV 468
            G+  D+ +++E   KL KV DVY   L +SKYLA D F+  DL  +P  QYL+G   K  LF +R HVSAW  D ++RPS KKV
Sbjct:  126 GMTTDKTVVEEEEAKLAKVLDVYEHRLGESKYLASDKFTLVDLHTIPVIQYLLGTPTKK-LFDERPHVSAWVADITSRPSAKKV 208          
BLAST of CX672147 vs. ExPASy Swiss-Prot
Match: GSTF_HYOMU (Glutathione S-transferase OS=Hyoscyamus muticus PE=1 SV=1)

HSP 1 Score: 73.559 bits (179), Expect = 6.391e-13
Identity = 43/99 (43.43%), Postives = 51/99 (51.52%), Query Frame = -2
Query:  220 PPIYQRTTQIFFFGKRGLPADENLIKERGEKLGKVFDVYGGGLFKSKYLAGDFFSRGDLSPLPFTQYLVGPMGKGFLFRDRKHVSAWGDDFSNRPSWKK 516
            P   + T +I      G+  D+  + E  EKLGKV DVY   L  SKYL GD F+  DL   P   YL+G   K  LF  R HVSAW  D   RP+W K
Sbjct:  109 PVASKLTFEIVIKPMLGMVTDDAAVAENEEKLGKVLDVYESRLKDSKYLGGDSFTLADLHHAPAMNYLMGTKVKS-LFDSRPHVSAWCADILARPAWSK 206          
BLAST of CX672147 vs. ExPASy Swiss-Prot
Match: GSTF1_ARATH (Glutathione S-transferase 1 OS=Arabidopsis thaliana GN=GST1 PE=1 SV=2)

HSP 1 Score: 73.1738 bits (178), Expect = 8.347e-13
Identity = 40/84 (47.62%), Postives = 53/84 (63.10%), Query Frame = -2
Query:  217 GLPADENLIKERGEKLGKVFDVYGGGLFKSKYLAGDFFSRGDLSPLPFTQYLVGPMGKGFLFRDRKHVSAWGDDFSNRPSWKKV 468
            G+  D+ +++E   KL KV DVY   L +SKYLA D F+  DL  +P  QYL+G   K  LF +R HVSAW  D ++RPS +KV
Sbjct:  125 GMTTDKTVVEEEEAKLAKVLDVYEHRLGESKYLASDHFTLVDLHTIPVIQYLLGTPTKK-LFDERPHVSAWVADITSRPSAQKV 207          
BLAST of CX672147 vs. ExPASy Swiss-Prot
Match: GSTF1_ORYSJ (Probable glutathione S-transferase GSTF1 OS=Oryza sativa subsp. japonica GN=GSTF1 PE=1 SV=2)

HSP 1 Score: 68.5514 bits (166), Expect = 2.056e-11
Identity = 37/85 (43.53%), Postives = 49/85 (57.65%), Query Frame = -2
Query:  217 RGLPADENLIKERGEKLGKVFDVYGGGLFKSKYLAGDFFSRGDLSPLPFTQYLVGPMGKGFLFRDRKHVSAWGDDFSNRPSWKKV 471
            RG+P ++ ++ E  EKL KV +VY   L +S YLAGDF S  DL+  P+T Y +G      LF    HV AW +    RPS KK+
Sbjct:  127 RGIPTNQKVVDESAEKLKKVLEVYEARLSQSTYLAGDFVSFADLNHFPYTFYFMG-TPYASLFDSYPHVKAWWERLMARPSVKKL 210          
BLAST of CX672147 vs. ExPASy Swiss-Prot
Match: GSTF_SILCU (Glutathione S-transferase OS=Silene cucubalus GN=GST PE=1 SV=3)

HSP 1 Score: 67.781 bits (164), Expect = 3.507e-11
Identity = 40/92 (43.48%), Postives = 52/92 (56.52%), Query Frame = -2
Query:  220 QIFFFGKRGLPADENLIKERGEKLGKVFDVYGGGLFKSKYL-AGDFFSRGDLSPLPFTQYLVGPMGKGFLFRDRKHVSAWGDDFSNRPSWKK 492
            ++ F G  G+  D  +++E   KL KV DVY   L +S+YL A D F+  DL  LP   YL+G   K  LF +R HVSAW      RPSW+K
Sbjct:  119 ELVFKGIFGMQTDTTVVEENEAKLAKVLDVYEARLTESEYLGANDSFTLVDLHHLPLLGYLMGTQVKK-LFEERAHVSAWCKKILARPSWEK 209          
BLAST of CX672147 vs. ExPASy Swiss-Prot
Match: GSTF7_ARATH (Glutathione S-transferase OS=Arabidopsis thaliana GN=At3g03190 PE=2 SV=1)

HSP 1 Score: 67.0106 bits (162), Expect = 5.982e-11
Identity = 33/91 (36.26%), Postives = 51/91 (56.04%), Query Frame = -2
Query:  217 IFFFGKRGLPADENLIKERGEKLGKVFDVYGGGLFKSKYLAGDFFSRGDLSPLPFTQYLVGPMGKGFLFRDRKHVSAWGDDFSNRPSWKKV 489
            + F  K G P D  L++E   K  KV DVY   L  ++YL GD F+  DLS +P  +Y++       L   R++++ W ++ S RP+WKK+
Sbjct:  118 VVFKPKSGKPCDVALVEELKVKFDKVLDVYENRLATNRYLGGDEFTLADLSHMPGMRYIMNETSLSGLVTSRENLNRWWNEISARPAWKKL 208          
BLAST of CX672147 vs. ExPASy Swiss-Prot
Match: GSTF6_ARATH (Glutathione S-transferase 6, chloroplastic OS=Arabidopsis thaliana GN=GST6 PE=1 SV=3)

HSP 1 Score: 67.0106 bits (162), Expect = 5.982e-11
Identity = 40/89 (44.94%), Postives = 48/89 (53.93%), Query Frame = -2
Query:  217 FFGKRGLPADENLIKERGEKLGKVFDVYGGGLFKSKYLAGDFFSRGDLSPLPFTQYLVGPMGKGFLFRDRKHVSAWGDDFSNRPSWKKV 483
            F G  G+  D   ++E   KL KV DVY   L KS++LAGD F+  DL  LP   YL+G   K  LF  R  VS W    S RP+W KV
Sbjct:  170 FKGMFGMTTDPAAVQELEGKLQKVLDVYEARLAKSEFLAGDSFTLADLHHLPAIHYLLGTDSK-VLFDSRPKVSEWIKKISARPAWAKV 257          
The following BLAST results are available for this feature:
BLAST of CX672147 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 8
Match NameE-valueIdentityDescription
GSTF3_ARATH5.041e-2657.00Glutathione S-transferase ERD13 OS=Arabidopsis tha... [more]
GST11_ARATH4.893e-1348.81Glutathione S-transferase 11 OS=Arabidopsis thalia... [more]
GSTF_HYOMU6.391e-1343.43Glutathione S-transferase OS=Hyoscyamus muticus PE... [more]
GSTF1_ARATH8.347e-1347.62Glutathione S-transferase 1 OS=Arabidopsis thalian... [more]
GSTF1_ORYSJ2.056e-1143.53Probable glutathione S-transferase GSTF1 OS=Oryza ... [more]
GSTF_SILCU3.507e-1143.48Glutathione S-transferase OS=Silene cucubalus GN=G... [more]
GSTF7_ARATH5.982e-1136.26Glutathione S-transferase OS=Arabidopsis thaliana ... [more]
GSTF6_ARATH5.982e-1144.94Glutathione S-transferase 6, chloroplastic OS=Arab... [more]
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Properties
Property NameValue
Genbank descriptionUCRCS10_15C05_b Madame Vinous Sweet Orange Multiple Pathogen-Infected cDNA Library UCRCS10 Citrus sinensis cDNA clone UCRCS10-15C05-F9-6.b, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX672147 ID=CX672147; Name=CX672147; organism=Citrus sinensis; type=EST; length=520bp
TTTTTTTTTTTTTTTTTACATTCCACAAGGGCGACAACAAAAAATCCCCC
CCCTCCCACCATTTTTTTATTAAAACCAAAACACTGAAAAAACCCATCCC
CAAAACACAAAAACAAACCAAGTAGTAAAAAAATAAAACCCAACCCCCAG
GATTAAAAAACTCACCCAAAGGCAAAAACTTATTCAACACAAATTAAGTA
GCTAATAAAGCTCAAGGACTTTCTTCCAGGATGGCCTGTTGCTAAAATCA
TCCCCCCAGGCACTCACATGCTTCCTGTCCCTAAACAAAAACCCCTTCCC
CATCGGCCCAACCAAGTATTGAGTAAATGGAAGGGGACTCAAATCACCCC
GGCTGAAAAAATCCCCGGCCAAATACTTGCTCTTAAACAGCCCCCCCCCG
TAAACGTCAAAAACTTTTCCAAGCTTTTCCCCCCTCTCCTTTATCAAATT
CTCATCGGCAGGAAGTCCCCTCTTCCCAAAAAAAAAAATTTGCGTGGTCC
TCTGGTAAATTGGGGGGGGA
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