CX672112
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of CX672112 vs. ExPASy Swiss-Prot
Match: ANL2_ARATH (Homeobox-leucine zipper protein ANTHOCYANINLESS 2 OS=Arabidopsis thaliana GN=ANL2 PE=2 SV=1) HSP 1 Score: 282.722 bits (722), Expect = 1.501e-75 Identity = 133/177 (75.14%), Postives = 157/177 (88.70%), Query Frame = 3 Query: 3 VDVSIDTIRETSGAPAFVNCRRLPSGCVVQDMPNGYSKVTWVEHAEYDESQVHQLYKPLIISGMGFGAQRWVATLQRQCECLAILMSTSVSARDHTAITAGGRRSMLKLAQRMTDNFCAGVCASTVHKWNKLNAGNVDEDVRVMTRKSVDDPGEPPGIVLSAATSVWLPVSPQRLFN 533 VDVSID +RE SG + RRLPSGCVVQD+ NGYSKVTWVEHAEYDE+Q+HQLY+PL+ SG+GFG+QRW+ATLQRQCECLAIL+S+SV++ D+T+IT GGR+SMLKLAQRMT NFC+G+ A +VH W+KL GNVD DVRVMTRKSVDDPGEPPGIVLSAATSVWLP +PQRL++ Sbjct: 465 VDVSIDPVRENSGGAPVI--RRLPSGCVVQDVSNGYSKVTWVEHAEYDENQIHQLYRPLLRSGLGFGSQRWLATLQRQCECLAILISSSVTSHDNTSITPGGRKSMLKLAQRMTFNFCSGISAPSVHNWSKLTVGNVDPDVRVMTRKSVDDPGEPPGIVLSAATSVWLPAAPQRLYD 639
BLAST of CX672112 vs. ExPASy Swiss-Prot
Match: HDG1_ARATH (Homeobox-leucine zipper protein HDG1 OS=Arabidopsis thaliana GN=HDG1 PE=2 SV=1) HSP 1 Score: 263.848 bits (673), Expect = 7.215e-70 Identity = 123/178 (69.10%), Postives = 152/178 (85.39%), Query Frame = 3 Query: 3 VDVSIDTIRETSGAPAFVNCRRLPSGCVVQDMPNGYSKVTWVEHAEYDESQVHQLYKPLIISGMGFGAQRWVATLQRQCECLAILMSTSVSARDHTA-ITAGGRRSMLKLAQRMTDNFCAGVCASTVHKWNKLNAGNVDEDVRVMTRKSVDDPGEPPGIVLSAATSVWLPVSPQRLFN 533 VDVSID+IRE S + +CRRLPSGC+VQDM NGYSKVTW+EH EYDE+ +H+LY+PL+ G+ FGA RW+A LQRQCECL ILMS++VS + + I GR+SMLKLA+RMTDNFC GVCAS++ KW+KLN GNVDEDVR+MTRKSV++PGEPPGI+L+AATSVW+PVSP+RLF+ Sbjct: 462 VDVSIDSIREGSSS----SCRRLPSGCLVQDMANGYSKVTWIEHTEYDENHIHRLYRPLLRCGLAFGAHRWMAALQRQCECLTILMSSTVSTSTNPSPINCNGRKSMLKLAKRMTDNFCGGVCASSLQKWSKLNVGNVDEDVRIMTRKSVNNPGEPPGIILNAATSVWMPVSPRRLFD 635
BLAST of CX672112 vs. ExPASy Swiss-Prot
Match: ROC5_ORYSJ (Homeobox-leucine zipper protein ROC5 OS=Oryza sativa subsp. japonica GN=ROC5 PE=2 SV=1) HSP 1 Score: 249.98 bits (637), Expect = 1.078e-65 Identity = 124/189 (65.61%), Postives = 154/189 (81.48%), Query Frame = 3 Query: 3 VDVSID-TIRETSGAPA----FVNCRRLPSGCVVQDMPNGYSKVTWVEHAEYDESQVHQLYKPLIISGMGFGAQRWVATLQRQCECLAILMST-SVSARDHTAITAGGRRSMLKLAQRMTDNFCAGVCASTVHKWNKLN--AGNVDEDVRVMTRKSVDDPGEPPGIVLSAATSVWLPVSPQRLFNVKAD 545 VDVSID +R+ + A V CRR+PSGCV+QD PNGY KVTWVEH EYDE+ VHQLY+PL+ SG+ FGA+RW+ATLQRQCECLAILMS+ +V+A D TAI+ G+RSMLKLA+RMT+NFCAGV AS+ +W+KL+ G++ EDVRVM RKSV +PGEPPG+VLSAATSVW+PV+P++LFN D Sbjct: 461 VDVSIDGLVRDHNSGTAPTGGNVKCRRVPSGCVMQDTPNGYCKVTWVEHTEYDEASVHQLYRPLLRSGLAFGARRWLATLQRQCECLAILMSSATVTANDSTAISQEGKRSMLKLARRMTENFCAGVSASSAREWSKLDGATGSIGEDVRVMARKSVSEPGEPPGVVLSAATSVWVPVAPEKLFNFLRD 649
BLAST of CX672112 vs. ExPASy Swiss-Prot
Match: ROC4_ORYSJ (Homeobox-leucine zipper protein ROC4 OS=Oryza sativa subsp. japonica GN=ROC4 PE=2 SV=2) HSP 1 Score: 238.039 bits (606), Expect = 4.240e-62 Identity = 117/185 (63.24%), Postives = 142/185 (76.76%), Query Frame = 3 Query: 3 VDVSIDTIRETSG-----APAFVNCRRLPSGCVVQDMPNGYSKVTWVEHAEYDESQVHQLYKPLIISGMGFGAQRWVATLQRQCECLAILMST-SVSARDHTAITAGGRRSMLKLAQRMTDNFCAGVCASTVHKWNKL--NAGNVDEDVRVMTRKSVDDPGEPPGIVLSAATSVWLPVSPQRLFN 533 VDVS D + G + A +NCRRLPSGCV+QD PNG+ KVTWVEH EYDE+ VH LY+PL+ SG+ GA RW+ATLQRQCECLA+LMS+ ++ D +AI G+RSMLKLA+RMTDNFCAGV S+ +W+KL GN+ EDV VM RKSVD+PG PPG+VLSAATSVW+PV P+RLFN Sbjct: 471 VDVSADELMRDQGITSASSTANMNCRRLPSGCVLQDTPNGFVKVTWVEHTEYDEASVHPLYRPLLRSGLALGAGRWIATLQRQCECLALLMSSIALPENDSSAIHPEGKRSMLKLARRMTDNFCAGVSTSSTREWSKLVGLTGNIGEDVHVMARKSVDEPGTPPGVVLSAATSVWMPVMPERLFN 655
BLAST of CX672112 vs. ExPASy Swiss-Prot
Match: ROC6_ORYSJ (Homeobox-leucine zipper protein ROC6 OS=Oryza sativa subsp. japonica GN=ROC6 PE=2 SV=2) HSP 1 Score: 222.631 bits (566), Expect = 1.843e-57 Identity = 115/202 (56.93%), Postives = 140/202 (69.31%), Query Frame = 3 Query: 3 VDVSIDTIRET-------SGAPAFVNCRRLPSGCVVQDMPNGYSKVTWVEHAEYDESQVHQLYKPLIISGMGFGAQRWVATLQRQCECLAILMSTSVSARDHTAITAGGRRSMLKLAQRMTDNFCAGVCASTVHKWNKLN-------------AGNVDEDVRVMTRKSVDDPGEPPGIVLSAATSVWLP-VSPQRLFNVKAD 545 VDVS+D + S + +++ CR LP+GC+VQDM NGYSKVTWV HAEYDE+ HQLY+PL+ SG GA+RW+A+LQRQC+ LAIL S S+ ARDH AIT GRRSMLKLAQRMTDNFCAGVCAS KW +L+ G+ ++ VR+M R SV PGEPPG+VLSA TSV LP PQR+F+ D Sbjct: 493 VDVSVDAVLRPDQNGGGGSSSSSYMGCRLLPTGCIVQDMNNGYSKVTWVVHAEYDETAAHQLYRPLLRSGQALGARRWLASLQRQCQYLAILCSNSLPARDHAAITPVGRRSMLKLAQRMTDNFCAGVCASAAQKWRRLDEWRGEGGGGGGGGGGDGEDKVRMMARHSVGAPGEPPGVVLSATTSVRLPGTLPQRVFDYLRD 694
BLAST of CX672112 vs. ExPASy Swiss-Prot
Match: ROC7_ORYSI (Homeobox-leucine zipper protein ROC7 OS=Oryza sativa subsp. indica GN=ROC7 PE=3 SV=1) HSP 1 Score: 219.935 bits (559), Expect = 1.195e-56 Identity = 112/187 (59.89%), Postives = 138/187 (73.80%), Query Frame = 3 Query: 3 VDVSIDTIRETSGA----PAFVNCRRLPSGCVVQDMPNGYSKVTWVEHAEYDESQVHQLYKPLIISGMGFGAQRWVATLQRQCECLAILMSTSVSARDHTAI--TAGGRRSMLKLAQRMTDNFCAGVCASTVHKWNKLNAGNVDEDVRVMTRKSVDDPGEPPGIVLSAATSVWLPVSPQRLFNVKAD 545 VDVS+D +R +G A RR PSGC++Q+MPNGYSKVTWVEH E D+ VH LYKP++ SGM FGA+RWVATL+RQCE LA M+++V++ + T+ GRRSMLKLA+RM +FC GV AST H+W L +G+ EDVRVMTRKSVDDPG PPGIVL+AATS WLPV P R+F+ D Sbjct: 407 VDVSLDGLRAGAGGGCQPAAARGHRRRPSGCLIQEMPNGYSKVTWVEHVEADDQMVHNLYKPVVNSGMAFGARRWVATLERQCERLASAMASNVASSGDAGVITTSEGRRSMLKLAERMVASFCGGVTASTTHQWTTL-SGSGAEDVRVMTRKSVDDPGRPPGIVLNAATSFWLPVPPSRVFDFLRD 592
BLAST of CX672112 vs. ExPASy Swiss-Prot
Match: ROC7_ORYSJ (Homeobox-leucine zipper protein ROC7 OS=Oryza sativa subsp. japonica GN=ROC7 PE=2 SV=1) HSP 1 Score: 219.55 bits (558), Expect = 1.560e-56 Identity = 111/187 (59.36%), Postives = 138/187 (73.80%), Query Frame = 3 Query: 3 VDVSIDTIRETSGA----PAFVNCRRLPSGCVVQDMPNGYSKVTWVEHAEYDESQVHQLYKPLIISGMGFGAQRWVATLQRQCECLAILMSTSVSARDHTAI--TAGGRRSMLKLAQRMTDNFCAGVCASTVHKWNKLNAGNVDEDVRVMTRKSVDDPGEPPGIVLSAATSVWLPVSPQRLFNVKAD 545 VDVS+D +R +G A RR PSGC++Q+MPNGYSKVTWVEH E D+ VH LYKP++ SGM FGA+RWVATL+RQCE LA M+++V++ + T+ GRRSMLKLA+RM +FC GV AST H+W L +G+ EDVRVMTRKSVDDPG PPGI+L+AATS WLPV P R+F+ D Sbjct: 407 VDVSLDGLRAGAGGGCQPAAARGHRRRPSGCLIQEMPNGYSKVTWVEHVEADDQMVHNLYKPVVNSGMAFGARRWVATLERQCERLASAMASNVASSGDAGVITTSEGRRSMLKLAERMVASFCGGVTASTTHQWTTL-SGSGAEDVRVMTRKSVDDPGRPPGIILNAATSFWLPVPPSRVFDFLRD 592
BLAST of CX672112 vs. ExPASy Swiss-Prot
Match: ROC2_ORYSJ (Homeobox-leucine zipper protein ROC2 OS=Oryza sativa subsp. japonica GN=ROC2 PE=2 SV=1) HSP 1 Score: 216.468 bits (550), Expect = 1.321e-55 Identity = 107/182 (58.79%), Postives = 136/182 (74.73%), Query Frame = 3 Query: 3 VDVSIDTIRETSGAPAFVNCRRLPSGCVVQDMPNGYSKVTWVEHAEYDESQVHQLYKPLIISGMGFGAQRWVATLQRQCECLAILMSTSVSARDHTAITAG-GRRSMLKLAQRMTDNFCAGVCASTVHKWNKLNAGNVDEDVRVMTRKSVDDPGEPPGIVLSAATSVWLPVSPQRLFNVKAD 545 VDVS+D++R + + CRR PSGC++Q+MPNGYSKVTWVEH E D+ VH +YK L+ SG+ FGA+RWV TL RQCE LA +M++++ D IT+ GR+SMLKLA+RM +FC GV AS H+W L +G+ EDVRVMTRKSVDDPG PPGIVL+AATS WLPV P+R+F+ D Sbjct: 444 VDVSLDSLRPSP----VLKCRRRPSGCLIQEMPNGYSKVTWVEHVEVDDRSVHNIYKLLVNSGLAFGARRWVGTLDRQCERLASVMASNIPTSDIGVITSSEGRKSMLKLAERMVVSFCGGVTASVAHQWTTL-SGSGAEDVRVMTRKSVDDPGRPPGIVLNAATSFWLPVPPKRVFDFLRD 620
BLAST of CX672112 vs. ExPASy Swiss-Prot
Match: ROC1_ORYSJ (Homeobox-leucine zipper protein ROC1 OS=Oryza sativa subsp. japonica GN=ROC1 PE=2 SV=1) HSP 1 Score: 215.698 bits (548), Expect = 2.253e-55 Identity = 108/182 (59.34%), Postives = 134/182 (73.63%), Query Frame = 3 Query: 3 VDVSIDTIRETSGAPAFVNCRRLPSGCVVQDMPNGYSKVTWVEHAEYDESQVHQLYKPLIISGMGFGAQRWVATLQRQCECLAILMSTSVSARDHTAITA-GGRRSMLKLAQRMTDNFCAGVCASTVHKWNKLNAGNVDEDVRVMTRKSVDDPGEPPGIVLSAATSVWLPVSPQRLFNVKAD 545 VDVS+D++R + CRR PSGC++Q+MPNGYSKVTWVEH E D+S VH +YKPL+ SG+ FGA+RWV TL RQCE LA M++++ D IT+ GR+SMLKLA+RM +FC GV AS H+W L +G+ EDVRVMTRKSVDDPG PPGIVL+AATS WLPV P +F+ D Sbjct: 443 VDVSLDSLRPSP----VQKCRRRPSGCLIQEMPNGYSKVTWVEHVEVDDSSVHNIYKPLVNSGLAFGAKRWVGTLDRQCERLASAMASNIPNGDLGVITSVEGRKSMLKLAERMVASFCGGVTASVAHQWTTL-SGSGAEDVRVMTRKSVDDPGRPPGIVLNAATSFWLPVPPAAVFDFLRD 619
BLAST of CX672112 vs. ExPASy Swiss-Prot
Match: PDF2_ARATH (Homeobox-leucine zipper protein PROTODERMAL FACTOR 2 OS=Arabidopsis thaliana GN=PDF2 PE=2 SV=1) HSP 1 Score: 211.46 bits (537), Expect = 4.250e-54 Identity = 101/181 (55.80%), Postives = 135/181 (74.59%), Query Frame = 3 Query: 3 VDVSIDTIRETSGAPAFVNCRRLPSGCVVQDMPNGYSKVTWVEHAEYDESQVHQLYKPLIISGMGFGAQRWVATLQRQCECLAILMSTSVSARDHTAITAGGRRSMLKLAQRMTDNFCAGVCASTVHKWNKLNAGNVDEDVRVMTRKSVDDPGEPPGIVLSAATSVWLPVSPQRLFNVKAD 545 VDVS+D++R ++ + RR PSGC++Q++PNGYSKVTW+EH E D+ VH +YKPL+ SG+ FGA+RWVATL+RQCE LA M++++ + GR+SMLKLA+RM +FC+GV AST H W ++ D DVRVMTRKS+DDPG PPGIVLSAATS W+PV+P+R+F+ D Sbjct: 396 VDVSLDSLRPST---PILRTRRRPSGCLIQELPNGYSKVTWIEHMEVDDRSVHNMYKPLVQSGLAFGAKRWVATLERQCERLASSMASNIPGDLSVITSPEGRKSMLKLAERMVMSFCSGVGASTAHAWTTMSTTGSD-DVRVMTRKSMDDPGRPPGIVLSAATSFWIPVAPKRVFDFLRD 572 The following BLAST results are available for this feature:
BLAST of CX672112 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 28
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Sequences
The
following sequences are available for this feature:
EST sequence >CX672112 ID=CX672112; Name=CX672112; organism=Citrus sinensis; type=EST; length=775bpback to top |