EG358329

Overview
NameEG358329
Unique NameEG358329
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length525
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig8110 contig Csv1_Contig8110:954..1478. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of EG358329 vs. ExPASy Swiss-Prot
Match: MTDH_FRAAN (Probable mannitol dehydrogenase OS=Fragaria ananassa GN=CAD PE=2 SV=1)

HSP 1 Score: 140.198 bits (352), Expect = 5.647e-33
Identity = 67/83 (80.72%), Postives = 75/83 (90.36%), Query Frame = 2
Query:    2 LLGAPEKPLELPAFSLLMGRKIVGGSMIGGMKETQEMIDFAAKHNIRADIEVIPADYVNTALERLAKADVRYRFVIDVANTMK 250
            ++GAPEKPLELP F LLMGRK+V GS IGGMKETQEMIDFAA+HNI ADIEVIP DY+NTA+ERL KADVRYRFVID+ NT+K
Sbjct:  274 MVGAPEKPLELPVFPLLMGRKMVAGSGIGGMKETQEMIDFAARHNITADIEVIPIDYLNTAMERLVKADVRYRFVIDIGNTLK 356          
BLAST of EG358329 vs. ExPASy Swiss-Prot
Match: MTDH_PETCR (Mannitol dehydrogenase (Fragment) OS=Petroselinum crispum GN=ELI3 PE=2 SV=1)

HSP 1 Score: 139.813 bits (351), Expect = 7.375e-33
Identity = 65/84 (77.38%), Postives = 77/84 (91.67%), Query Frame = 2
Query:    2 LLGAPEKPLELPAFSLLMGRKIVGGSMIGGMKETQEMIDFAAKHNIRADIEVIPADYVNTALERLAKADVRYRFVIDVANTMKS 253
            ++GAPEKPLELP F LLMGRK++ GS IGG+KETQEM+DFAA+HNI AD+EVIP DYVNTA+ERL K+DVRYRFVIDVANT+K+
Sbjct:  253 MVGAPEKPLELPVFPLLMGRKVLAGSNIGGLKETQEMLDFAAQHNITADVEVIPVDYVNTAMERLVKSDVRYRFVIDVANTIKT 336          
BLAST of EG358329 vs. ExPASy Swiss-Prot
Match: MTDH_APIGR (Mannitol dehydrogenase OS=Apium graveolens GN=MTD PE=1 SV=1)

HSP 1 Score: 137.887 bits (346), Expect = 2.803e-32
Identity = 63/84 (75.00%), Postives = 77/84 (91.67%), Query Frame = 2
Query:    2 LLGAPEKPLELPAFSLLMGRKIVGGSMIGGMKETQEMIDFAAKHNIRADIEVIPADYVNTALERLAKADVRYRFVIDVANTMKS 253
            ++GAPEKP ELP FSLL GRK++GG++ GG+KETQEM+DFAAKHNI AD+EVIP DYVNTA+ERL K+DVRYRFVID+ANTM++
Sbjct:  276 MVGAPEKPFELPVFSLLKGRKLLGGTINGGIKETQEMLDFAAKHNITADVEVIPMDYVNTAMERLVKSDVRYRFVIDIANTMRT 359          
BLAST of EG358329 vs. ExPASy Swiss-Prot
Match: CADH7_ARATH (Cinnamyl alcohol dehydrogenase 7 OS=Arabidopsis thaliana GN=CAD7 PE=1 SV=2)

HSP 1 Score: 137.117 bits (344), Expect = 4.780e-32
Identity = 65/86 (75.58%), Postives = 76/86 (88.37%), Query Frame = 2
Query:    2 LLGAPEKPLELPAFSLLMGRKIVGGSMIGGMKETQEMIDFAAKHNIRADIEVIPADYVNTALERLAKADVRYRFVIDVANTMKSTP 259
            ++GAP +PLELP F L+ GRK+V GSM+GG+KETQEM+D A KHNI ADIE+I ADYVNTA+ERLAKADV+YRFVIDVANTMK TP
Sbjct:  272 MVGAPAEPLELPVFPLIFGRKMVVGSMVGGIKETQEMVDLAGKHNITADIELISADYVNTAMERLAKADVKYRFVIDVANTMKPTP 357          
BLAST of EG358329 vs. ExPASy Swiss-Prot
Match: MTDH_MESCR (Probable mannitol dehydrogenase OS=Mesembryanthemum crystallinum GN=ELI3 PE=2 SV=1)

HSP 1 Score: 136.732 bits (343), Expect = 6.243e-32
Identity = 64/84 (76.19%), Postives = 75/84 (89.29%), Query Frame = 2
Query:    2 LLGAPEKPLELPAFSLLMGRKIVGGSMIGGMKETQEMIDFAAKHNIRADIEVIPADYVNTALERLAKADVRYRFVIDVANTMKS 253
            ++G P+KPLELP F LL GRKI+ GS IGGMKETQEMIDFAAKH+I++DIEV+P DYVNTA+ERL K DVRYRFVIDVANT+K+
Sbjct:  277 MVGVPDKPLELPVFPLLQGRKILAGSCIGGMKETQEMIDFAAKHDIKSDIEVVPMDYVNTAMERLLKGDVRYRFVIDVANTLKA 360          
BLAST of EG358329 vs. ExPASy Swiss-Prot
Match: MTDH3_STYHU (Probable mannitol dehydrogenase 3 OS=Stylosanthes humilis GN=CAD3 PE=2 SV=1)

HSP 1 Score: 133.65 bits (335), Expect = 5.285e-31
Identity = 60/85 (70.59%), Postives = 77/85 (90.59%), Query Frame = 2
Query:    2 LLGAPEKPLELPAFSLLMGRKIVGGSMIGGMKETQEMIDFAAKHNIRADIEVIPADYVNTALERLAKADVRYRFVIDVANTMKST 256
            L+GA EKPLELP F L++GRK+VGG+++GG+KETQEMIDF+ KHN++ +IEV+P DYVN A++RLAKADV+YRFVIDVANT+K T
Sbjct:  278 LIGAIEKPLELPPFPLILGRKLVGGTLVGGLKETQEMIDFSPKHNVKPEIEVVPMDYVNIAMQRLAKADVKYRFVIDVANTLKPT 362          
BLAST of EG358329 vs. ExPASy Swiss-Prot
Match: CADH8_ARATH (Cinnamyl alcohol dehydrogenase 8 OS=Arabidopsis thaliana GN=CAD8 PE=1 SV=1)

HSP 1 Score: 132.494 bits (332), Expect = 1.177e-30
Identity = 65/86 (75.58%), Postives = 73/86 (84.88%), Query Frame = 2
Query:    2 LLGAPEKPLELPAFSLLMGRKIVGGSMIGGMKETQEMIDFAAKHNIRADIEVIPADYVNTALERLAKADVRYRFVIDVANTMKSTP 259
            ++GAPEKPLELP   L+  RK+V GSMIGG+KETQEMID A KHNI ADIE+I ADYVNTA+ERL KADVRYRFVIDVANT+K  P
Sbjct:  272 MVGAPEKPLELPVMPLIFERKMVMGSMIGGIKETQEMIDMAGKHNITADIELISADYVNTAMERLEKADVRYRFVIDVANTLKPNP 357          
BLAST of EG358329 vs. ExPASy Swiss-Prot
Match: CADH9_ARATH (Probable cinnamyl alcohol dehydrogenase 9 OS=Arabidopsis thaliana GN=CAD9 PE=1 SV=2)

HSP 1 Score: 128.642 bits (322), Expect = 1.700e-29
Identity = 61/81 (75.31%), Postives = 72/81 (88.89%), Query Frame = 2
Query:    5 LGAPEKPLELPAFSLLMGRKIVGGSMIGGMKETQEMIDFAAKHNIRADIEVIPADYVNTALERLAKADVRYRFVIDVANTM 247
            LG PEKPLELP F L++GRK+VGGS +GGMKETQEM+DF AKHNI ADIE+I  D +NTA+ERLAK+DVRYRFVIDVAN++
Sbjct:  277 LGLPEKPLELPMFPLVLGRKMVGGSDVGGMKETQEMLDFCAKHNITADIELIKMDEINTAMERLAKSDVRYRFVIDVANSL 357          
BLAST of EG358329 vs. ExPASy Swiss-Prot
Match: CADH6_ARATH (Probable cinnamyl alcohol dehydrogenase 6 OS=Arabidopsis thaliana GN=CAD6 PE=2 SV=1)

HSP 1 Score: 124.79 bits (312), Expect = 2.455e-28
Identity = 58/85 (68.24%), Postives = 74/85 (87.06%), Query Frame = 2
Query:    2 LLGAPEKPLELPAFSLLMGRKIVGGSMIGGMKETQEMIDFAAKHNIRADIEVIPADYVNTALERLAKADVRYRFVIDVANTMKST 256
            LLGA EKP ++ AFSL++GRK + GS IGGM+ETQEMIDFAA+H I+A+IE+I  DYVNTA++RLAK DVRYRFVID++NT+ +T
Sbjct:  277 LLGATEKPFDISAFSLILGRKSIAGSGIGGMQETQEMIDFAAEHGIKAEIEIISMDYVNTAMDRLAKGDVRYRFVIDISNTLAAT 361          
BLAST of EG358329 vs. ExPASy Swiss-Prot
Match: GEDH1_OCIBA (Geraniol dehydrogenase 1 OS=Ocimum basilicum GN=GEDH1 PE=1 SV=1)

HSP 1 Score: 119.783 bits (299), Expect = 7.898e-27
Identity = 54/83 (65.06%), Postives = 71/83 (85.54%), Query Frame = 2
Query:    2 LLGAPEKPLELPAFSLLMGRKIVGGSMIGGMKETQEMIDFAAKHNIRADIEVIPADYVNTALERLAKADVRYRFVIDVANTMK 250
            ++G P+KPL+LP F L+ GR+ + GS IGG+KETQEMIDFAAK+NI AD+EVIP DY+NTA++RL K+DV+YRFVIDV  ++K
Sbjct:  276 VVGLPDKPLQLPVFPLIQGRRTIAGSGIGGLKETQEMIDFAAKNNIVADVEVIPIDYINTAMDRLLKSDVKYRFVIDVEKSLK 358          
The following BLAST results are available for this feature:
BLAST of EG358329 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 50
Match NameE-valueIdentityDescription
MTDH_FRAAN5.647e-3380.72Probable mannitol dehydrogenase OS=Fragaria ananas... [more]
MTDH_PETCR7.375e-3377.38Mannitol dehydrogenase (Fragment) OS=Petroselinum ... [more]
MTDH_APIGR2.803e-3275.00Mannitol dehydrogenase OS=Apium graveolens GN=MTD ... [more]
CADH7_ARATH4.780e-3275.58Cinnamyl alcohol dehydrogenase 7 OS=Arabidopsis th... [more]
MTDH_MESCR6.243e-3276.19Probable mannitol dehydrogenase OS=Mesembryanthemu... [more]
MTDH3_STYHU5.285e-3170.59Probable mannitol dehydrogenase 3 OS=Stylosanthes ... [more]
CADH8_ARATH1.177e-3075.58Cinnamyl alcohol dehydrogenase 8 OS=Arabidopsis th... [more]
CADH9_ARATH1.700e-2975.31Probable cinnamyl alcohol dehydrogenase 9 OS=Arabi... [more]
CADH6_ARATH2.455e-2868.24Probable cinnamyl alcohol dehydrogenase 6 OS=Arabi... [more]
GEDH1_OCIBA7.898e-2765.06Geraniol dehydrogenase 1 OS=Ocimum basilicum GN=GE... [more]

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Properties
Property NameValue
Genbank description2h8 Citrus sinensis flesh suppression subtractive hybridization (SSH) cDNA library Moro nucellare 58-8D-I cultivar Citrus sinensis cDNA clone Cl0002h8, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EG358329 ID=EG358329; Name=EG358329; organism=Citrus sinensis; type=EST; length=525bp
ACTTCTTGGTGCACCAGAGAAGCCACTGGAGCTACCAGCTTTCTCCCTGC
TCATGGGGAGGAAGATAGTTGGTGGCAGCATGATTGGGGGGATGAAGGAG
ACTCAAGAGATGATTGATTTTGCGGCAAAACACAACATCAGAGCTGATAT
TGAGGTCATACCGGCCGACTATGTGAACACAGCCCTGGAGCGCCTTGCTA
AAGCCGATGTTAGATATCGCTTTGTCATCGACGTTGCAAACACAATGAAG
TCCACCCCTTAAAATTTTCTTCCTTTTGAGTTGCGCTTAAAATGAGGAAT
GTGCGTTTATTGTCGAGTCACAACATCGTCTAAGTTTTAGATTATGTTAG
TCTTTTGTTGTGATTTCAAATCTGTTTTTGCTTTTTAAGAATAATAATTT
GGTGACGTATATTCCATCTGTGTGACAAATTTATGTAATAGCGAGCTATA
TGTTAGTTTTTACCGAAATTAATTATTCGGGTTTTGATTTAGTAAAAAAA
AAAAAAAAAAAAAAAAAAAAAAAGG
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