CX672094

Overview
NameCX672094
Unique NameCX672094
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length741
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
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BLAST of CX672094 vs. ExPASy Swiss-Prot
Match: PP199_ARATH (Pentatricopeptide repeat-containing protein At2g41720 OS=Arabidopsis thaliana GN=EMB2654 PE=2 SV=1)

HSP 1 Score: 166.392 bits (420), Expect = 1.475e-40
Identity = 76/152 (50.00%), Postives = 111/152 (73.03%), Query Frame = -1 
Query:  286 LVAEFMREQDITFSDSIFFEMVLACSLLRDWKTTIDLIKQMEPSFHVVSIGXXXXXXXXLGKSGRIESMMKLFFKIVSSGAEANFNTYSILLKNLLAAGNWRKYMEVLQWMEDAGIQPSYGMFRDIVSFAQTRGGAEYAAIIQERIESLRMK 741
            ++ + MRE++I F+ ++FFE+  AC+ L++WK  IDLI+ M+P    +SIG         GKSG++E+MMKLF+KI++SG   N  TY+ILL++LLA GNWRKY+EVL+WM  AGIQPS  M+RDI+SF +   G E+  +I++++ESLR K
Sbjct:  656 VLMDLMREKEIPFTGAVFFEIFSACNTLQEWKRAIDLIQMMDPYLPSLSIGLTNQMLHLFGKSGKVEAMMKLFYKIIASGVGINLKTYAILLEHLLAVGNWRKYIEVLEWMSGAGIQPSNQMYRDIISFGERSAGIEFEPLIRQKLESLRNK 807
The following BLAST results are available for this feature:
BLAST of CX672094 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 1
Match NameE-valueIdentityDescription
PP199_ARATH1.475e-4050.00Pentatricopeptide repeat-containing protein At2g41... [more]
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Properties
Property NameValue
Genbank descriptionUCRCS10_14H08_g Madame Vinous Sweet Orange Multiple Pathogen-Infected cDNA Library UCRCS10 Citrus sinensis cDNA clone UCRCS10-14H08-O16-5.g, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX672094 ID=CX672094; Name=CX672094; organism=Citrus sinensis; type=EST; length=741bp
AAGACATCATTGATACAAATAATTATGTAAAAGTCCCACTTTGTATTGTC
CCTTATGAATTCTGTTATTGCTGTACAAAATACAAGTTCAAAAATTTAGG
AAAAAAATTACTTTGAATTAATATAATGCTTAGGGAATGCCGAGCTCCAA
CTTTTATTCCCTCCAATTCTCAGGACTGGAGATTGCTGTAATAAGGAGTG
TCCTTACACTTCTGGTCTAGCTATCAACTGTGACGATGGAAGAAGAGGAA
CTCGTGGATTGTTGGTCAAAACTTGGATCCCCAGATTTCATTCTCAAGGA
TTCTATTCTTTCTTGAATAATAGCTGCATATTCAGCTCCGCCCCTTGTTT
GTGCAAAAGAAACTATATCACGAAACATTCCATAAGAAGGTTGAATTCCA
GCATCCTCCATCCACTGCAGGACCTCCATATACTTTCTCCAATTTCCAGC
AGCCAAAAGATTTTTCAGCAAAATGGAATAAGTATTGAAGTTGGCTTCAG
CACCTGATGATACTATCTTGAAGAACAACTTCATCATAGATTCAATTCTC
CCACTTTTGCCGAGCAGATGCAGAAGTTGATTCAGAAGTCCTATTGAAAC
TACATGGAATGATGGTTCCATCTGTTTGATCAGGTCAATTGTTGTCTTCC
AATCTCGCAACAGGCTACAAGCTAATACCATTTCAAAGAAAATAGAATCA
GAAAAGGTGATATCTTGTTCTCTCATAAACTCCGCAACAAG
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