CX672078
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of CX672078 vs. ExPASy Swiss-Prot
Match: AFR_ARATH (F-box protein AFR OS=Arabidopsis thaliana GN=AFR PE=1 SV=2) HSP 1 Score: 184.496 bits (467), Expect = 6.229e-46 Identity = 91/151 (60.26%), Postives = 112/151 (74.17%), Query Frame = 1 Query: 376 TQPLIPGLPDEIGELCLLHVPYPYQALVRSVSYSWNKAITDPGFALCKKSLSLSLPYLFIFSFHKPTARIQWQALDPRSGRWFVLPPMP--CPKAVCPQAFACTSLPRQGKLFVLGGMRSDTETPMQSTIMYRATTNQWRLASPMLTPRSF 822 +QPLI GLP++I ELCLL +PYPY AL RSVS SWNK IT+P F K+SLS+S PYLF+F+F+K TARIQWQ+LD SGRWFVLPPMP K P A +C S+PRQGKLFVLGG D +S ++Y A TN+W SPM++PR++ Sbjct: 25 SQPLISGLPNDIAELCLLRLPYPYHALYRSVSSSWNKTITNPRFLFSKQSLSISSPYLFVFAFNKSTARIQWQSLDLASGRWFVLPPMPNSFTKISSPHALSCASMPRQGKLFVLGG--GDVN---RSAVVYTALTNRWSCISPMMSPRTY 170
BLAST of CX672078 vs. ExPASy Swiss-Prot
Match: FBK17_ARATH (F-box/kelch-repeat protein At1g30090 OS=Arabidopsis thaliana GN=At1g30090 PE=2 SV=1) HSP 1 Score: 122.865 bits (307), Expect = 2.226e-27 Identity = 59/149 (39.60%), Postives = 82/149 (55.03%), Query Frame = 1 Query: 379 QPLIPGLPDEIGELCLLHVPYPYQALVRSVSYSWNKAI-TDPGFALCKKSLSLSLPYLFIFSFHKPTARIQWQALDPRSGRWFVLPPMPCPKAVCPQAFACTSLPRQGKLFVLGGMRSDTETPMQSTIMYRATTNQWRLASPMLTPRSF 822 +PLIPGLPD++ CLL VP +SV W+ T F +K P+LF+ F + T +IQW+ LD R+ W +P MPC VCP F S+PR+G +FV GGM SD++ P+ + Y N W + + M+T RSF Sbjct: 51 EPLIPGLPDDVALNCLLRVPVQSHVSSKSVCKRWHLLFGTKETFFAKRKEFGFKDPWLFVVGFSRCTGKIQWKVLDLRNLTWHEIPAMPCRDKVCPHGFRSVSMPREGTMFVCGGMVSDSDCPLDLVLKYDMVKNHWTVTNKMITARSF 199
BLAST of CX672078 vs. ExPASy Swiss-Prot
Match: FBK22_ARATH (F-box/kelch-repeat protein At1g55270 OS=Arabidopsis thaliana GN=At1g55270 PE=2 SV=1) HSP 1 Score: 74.3294 bits (181), Expect = 9.079e-13 Identity = 47/147 (31.97%), Postives = 67/147 (45.58%), Query Frame = 1 Query: 382 PLIPGLPDEIGELCLLHVPYPYQALVRSVSYSWNKAITDPGFALCKKSLSLSLPYLFIFSFHKPTARIQWQALDPRSGRWFVLPPMPCPKAVCPQAFACTSLPRQGKLFVLGGMRSDTETPMQSTIMYRATTNQWRLASPMLTPRSF 822 PL+PGLPD++ CL+ VP +R V W + + F +K L +S ++++F + +I W DP S W LPP+P + F C L G L G + M+ I Y A TN+W A ML R F Sbjct: 77 PLLPGLPDDLAVACLIRVPRAEHRKLRLVCKRWYRLASGNFFYSQRKLLGMSEEWVYVFKRDR-DGKISWNTFDPISQLWQPLPPVPREYSEA-VGFGCAVL--SGCHLYLFGGKDPLRGSMRRVIFYNARTNKWHRAPDMLRKRHF 219 The following BLAST results are available for this feature:
BLAST of CX672078 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 3
Properties
Sequences
The
following sequences are available for this feature:
EST sequence >CX672078 ID=CX672078; Name=CX672078; organism=Citrus sinensis; type=EST; length=823bpback to top |