CX672074
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CX672074 vs. ExPASy Swiss-Prot
Match: JMJD5_RAT (JmjC domain-containing protein 5 OS=Rattus norvegicus GN=Jmjd5 PE=2 SV=1) HSP 1 Score: 116.316 bits (290), Expect = 2.109e-25 Identity = 64/136 (47.06%), Postives = 79/136 (58.09%), Query Frame = -2 Query: 211 SIPEYACPVFLAYFINRHVWILVWFVYTITISTDSGFFWLKQSIPLPLHFQVVGKKYIRLYPASLSEELYPYSETMLCNSSQVDLDNIDETKFPKVRDLEFFDCILDEGEMLYIPPKWWHYVRSLSISFSVSFWWS 618 SIP+Y C L + I WF TIS L Q QV+G+KYIRLY SE +YP+ +L N+SQVD++N D KFPK + F CIL G+ L+IP K+WHYVRSL +SFSVSFWWS Sbjct: 288 SIPDYCC---LGNGEEEEITINAWFGPQGTISP------LHQDPQQNFLVQVLGRKYIRLYSPQESEAVYPHETHILHNTSQVDVENPDLEKFPKFTEAPFLSCILSPGDTLFIPAKYWHYVRSLDLSFSVSFWWS 414
BLAST of CX672074 vs. ExPASy Swiss-Prot
Match: JMJD5_MOUSE (JmjC domain-containing protein 5 OS=Mus musculus GN=Jmjd5 PE=2 SV=1) HSP 1 Score: 116.316 bits (290), Expect = 2.109e-25 Identity = 64/136 (47.06%), Postives = 79/136 (58.09%), Query Frame = -2 Query: 211 SIPEYACPVFLAYFINRHVWILVWFVYTITISTDSGFFWLKQSIPLPLHFQVVGKKYIRLYPASLSEELYPYSETMLCNSSQVDLDNIDETKFPKVRDLEFFDCILDEGEMLYIPPKWWHYVRSLSISFSVSFWWS 618 SIP+Y C L + I WF TIS L Q QV+G+KYIRLY SE +YP+ +L N+SQVD++N D KFPK + F CIL G+ L+IP K+WHYVRSL +SFSVSFWWS Sbjct: 288 SIPDYCC---LGNGEEEEITINAWFGPQGTISP------LHQDPQQNFLVQVLGRKYIRLYSPQESEAVYPHETHILHNTSQVDVENPDLEKFPKFTEAPFLSCILSPGDTLFIPAKYWHYVRSLDLSFSVSFWWS 414
BLAST of CX672074 vs. ExPASy Swiss-Prot
Match: JMJD5_BOVIN (JmjC domain-containing protein 5 OS=Bos taurus GN=JMJD5 PE=2 SV=1) HSP 1 Score: 114.005 bits (284), Expect = 1.047e-24 Identity = 62/136 (45.59%), Postives = 79/136 (58.09%), Query Frame = -2 Query: 211 SIPEYACPVFLAYFINRHVWILVWFVYTITISTDSGFFWLKQSIPLPLHFQVVGKKYIRLYPASLSEELYPYSETMLCNSSQVDLDNIDETKFPKVRDLEFFDCILDEGEMLYIPPKWWHYVRSLSISFSVSFWWS 618 SIP+Y C L + I WF T+S L Q QV+G+KYIRLY SE LYP+ +L N+SQVD++N D KFP+ + F C+L GE+L+IP K WHYVR+L +SFSVSFWWS Sbjct: 280 SIPDYCC---LGDGEEEEITINAWFGPQGTVSP------LHQDPQQNFLAQVMGRKYIRLYSPQESEALYPHDTHLLHNTSQVDVENPDLEKFPRFAEAPFLSCVLSPGEVLFIPVKHWHYVRALDLSFSVSFWWS 406
BLAST of CX672074 vs. ExPASy Swiss-Prot
Match: JMJD5_HUMAN (JmjC domain-containing protein 5 OS=Homo sapiens GN=JMJD5 PE=2 SV=1) HSP 1 Score: 110.153 bits (274), Expect = 1.512e-23 Identity = 63/136 (46.32%), Postives = 77/136 (56.62%), Query Frame = -2 Query: 211 SIPEYACPVFLAYFINRHVWILVWFVYTITISTDSGFFWLKQSIPLPLHFQVVGKKYIRLYPASLSEELYPYSETMLCNSSQVDLDNIDETKFPKVRDLEFFDCILDEGEMLYIPPKWWHYVRSLSISFSVSFWWS 618 SIP+Y L + I WF TIS L Q QV+G+KYIRLY S LYP+ +L N+SQVD++N D KFPK F CIL GE+L+IP K+WHYVR+L +SFSVSFWWS Sbjct: 290 SIPDYCS---LGDGEEEEITINAWFGPQGTISP------LHQDPQQNFLVQVMGRKYIRLYSPQESGALYPHDTHLLHNTSQVDVENPDLEKFPKFAKAPFLSCILSPGEILFIPVKYWHYVRALDLSFSVSFWWS 416
BLAST of CX672074 vs. ExPASy Swiss-Prot
Match: JMJCD_DICDI (JmjC domain-containing protein D OS=Dictyostelium discoideum GN=jcdD PE=4 SV=1) HSP 1 Score: 87.8113 bits (216), Expect = 8.035e-17 Identity = 42/94 (44.68%), Postives = 64/94 (68.09%), Query Frame = -2 Query: 226 PLHF--------QVVGKKYIRLYPASLSEELYPYSETMLC-NSSQVDLDNIDETKFPKVRDLEFFDCILDEGEMLYIPPKWWHYVRSLSISFSV 480 PLH+ Q+VG+KYI+L+ S LYP+ + L N+S VD++N D +KFP ++ ++ + IL+ GE+LYIPP +WH+V+SLS SFS+ Sbjct: 353 PLHYDPKHNFLCQIVGRKYIKLFSPKESNNLYPHLNSKLFFNTSMVDVENPDHSKFPLFKNCDYIELILNAGEILYIPPTYWHFVKSLSQSFSI 446
BLAST of CX672074 vs. ExPASy Swiss-Prot
Match: JMJCF_DICDI (JmjC domain-containing protein F OS=Dictyostelium discoideum GN=jcdF PE=4 SV=1) HSP 1 Score: 73.1738 bits (178), Expect = 2.048e-12 Identity = 43/113 (38.05%), Postives = 62/113 (54.87%), Query Frame = -2 Query: 214 PLHF--------QVVGKKYIRLYPASLSEELY--------------PYSETMLCNSSQVDLDNIDETKFP--KVRDLEFFDCILDEGEMLYIPPKWWHYVRSLSISFSVSFWW 480 PLHF Q+VG KY+RLYP + LY S+T N S VD ++ D K+P K+ + + +CIL G++L++P ++HYVRSLS S S+SFW+ Sbjct: 359 PLHFDSYDNFLTQIVGYKYVRLYPQNQISNLYLKKDQGDSDDNNLVKNSKTAQNNISFVDFEDTDFEKYPLLKIANQHYTECILGPGDILFMPSGYFHYVRSLSTSLSLSFWF 471
BLAST of CX672074 vs. ExPASy Swiss-Prot
Match: JMJCC_DICDI (JmjC domain-containing protein C OS=Dictyostelium discoideum GN=jcdC PE=4 SV=2) HSP 1 Score: 72.0182 bits (175), Expect = 4.562e-12 Identity = 33/94 (35.11%), Postives = 57/94 (60.64%), Query Frame = -2 Query: 199 LHFQVVGKKYIRLYPASLSEELYPYS-ETMLCNSSQVDLDNIDETKFPKVRDLEFFDCILDEGEMLYIPPKWWHYVRSLSISFSVSFWWSDGGS 477 LH ++G+K +L+ ++ + E + S+ DLDN D KFP+ ++ + + L++GEML+IP WWH+V++L S S++FW+ GS Sbjct: 199 LHAIIIGRKQFKLFDPIVNVNCFKRKKEWGKFHQSEFDLDNPDFNKFPEAKNFKIIEIQLNQGEMLFIPKLWWHHVKTLEPSISINFWFQHIGS 292
BLAST of CX672074 vs. ExPASy Swiss-Prot
Match: HIF1N_MOUSE (Hypoxia-inducible factor 1-alpha inhibitor OS=Mus musculus GN=Hif1an PE=2 SV=2) HSP 1 Score: 70.8626 bits (172), Expect = 1.016e-11 Identity = 35/89 (39.33%), Postives = 53/89 (59.55%), Query Frame = -2 Query: 214 QVVGKKYIRLYPASLSEELYPYSETMLCN-SSQVDLDNIDETKFPKVRDLEFFDCILDEGEMLYIPPKWWHYVRSL---SISFSVSFWW 468 Q+ G K L+P E LYPY C+ SQVD DN D +FP R++ ++ ++ G++LYIP WWH++ SL I+ +V+FW+ Sbjct: 209 QIKGHKRCILFPPDQFECLYPYPVHHPCDRQSQVDFDNPDYERFPNFRNVVGYETVVGPGDVLYIPMYWWHHIESLLNGGITITVNFWY 297
BLAST of CX672074 vs. ExPASy Swiss-Prot
Match: HIF1N_HUMAN (Hypoxia-inducible factor 1-alpha inhibitor OS=Homo sapiens GN=HIF1AN PE=1 SV=2) HSP 1 Score: 68.9366 bits (167), Expect = 3.862e-11 Identity = 34/89 (38.20%), Postives = 53/89 (59.55%), Query Frame = -2 Query: 214 QVVGKKYIRLYPASLSEELYPYSETMLCN-SSQVDLDNIDETKFPKVRDLEFFDCILDEGEMLYIPPKWWHYVRSL---SISFSVSFWW 468 Q+ G K L+P E LYPY C+ SQVD DN D +FP +++ ++ ++ G++LYIP WWH++ SL I+ +V+FW+ Sbjct: 209 QIKGYKRCILFPPDQFECLYPYPVHHPCDRQSQVDFDNPDYERFPNFQNVVGYETVVGPGDVLYIPMYWWHHIESLLNGGITITVNFWY 297 The following BLAST results are available for this feature:
BLAST of CX672074 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 9
Properties
Sequences
The
following sequences are available for this feature:
EST sequence >CX672074 ID=CX672074; Name=CX672074; organism=Citrus sinensis; type=EST; length=829bpback to top |