CX672064

Overview
NameCX672064
Unique NameCX672064
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length875
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
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BLAST of CX672064 vs. ExPASy Swiss-Prot
Match: UMP1_ARATH (Uncharacterized protein At3g15000, mitochondrial OS=Arabidopsis thaliana GN=At3g15000 PE=1 SV=1)

HSP 1 Score: 172.17 bits (435), Expect = 3.506e-42
Identity = 79/130 (60.77%), Postives = 104/130 (80.00%), Query Frame = -3 
Query:  478 SPLNDPSPNWSNRPPKETIMLDGCDYQHWLIVMEFPNPSGLSEEEMINAYVKTLAAVVGSEEEAKKKIYSVCTTTYTGFGALIDEELSYKVKGQPGVLWVLPDSYIDVPNKDYGGDLFVDGKVI-HRPQY 864
            S LNDP+PNWSNRPPKETI+LDGCD++HWL+V+E P     + +E+I++Y+KTLA +VGSE+EA+ KIYSV T  Y  FGAL+ E+LS+K+K    V WVLPDSY+DV NKDYGG+ F+DGK + + P+Y
Sbjct:   72 SSLNDPNPNWSNRPPKETILLDGCDFEHWLVVVEPPQGEP-TRDEIIDSYIKTLAQIVGSEDEARMKIYSVSTRCYYAFGALVSEDLSHKLKELSNVRWVLPDSYLDVRNKDYGGEPFIDGKAVPYDPKY 200
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BLAST of CX672064 vs. ExPASy Swiss-Prot
Match: DAG_ANTMA (DAG protein, chloroplastic OS=Antirrhinum majus GN=DAG PE=2 SV=1)

HSP 1 Score: 152.91 bits (385), Expect = 2.201e-36
Identity = 71/109 (65.14%), Postives = 84/109 (77.06%), Query Frame = -3 
Query:  493 KETIMLDGCDYQHWLIVMEFPNPSGLSEEEMINAYVKTLAAVVGSEEEAKKKIYSVCTTTYTGFGALIDEELSYKVKGQPGVLWVLPDSYIDVPNKDYGGDLFVDGKVI 819
            +ETIML GCDY HWLIVMEFP     + E+MI+ Y+ TLA V+GS EEAKK +Y+  TTTYTGF   + EE S K KG PGVLWVLPDSYIDV NKDYGGD +V+G++I
Sbjct:   76 RETIMLPGCDYNHWLIVMEFPKDPAPTREQMIDTYLNTLATVLGSMEEAKKNMYAFSTTTYTGFQCTVTEETSEKFKGLPGVLWVLPDSYIDVKNKDYGGDKYVNGEII 184
The following BLAST results are available for this feature:
BLAST of CX672064 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 2
Match NameE-valueIdentityDescription
UMP1_ARATH3.506e-4260.77Uncharacterized protein At3g15000, mitochondrial O... [more]
DAG_ANTMA2.201e-3665.14DAG protein, chloroplastic OS=Antirrhinum majus GN... [more]
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Properties
Property NameValue
Genbank descriptionUCRCS10_14G02_b Madame Vinous Sweet Orange Multiple Pathogen-Infected cDNA Library UCRCS10 Citrus sinensis cDNA clone UCRCS10-14G02-M4-6.b, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX672064 ID=CX672064; Name=CX672064; organism=Citrus sinensis; type=EST; length=875bp
TTTGAAACAACCATATATAAAGAAATATAATGCATTTTAGTTGCAAGAGC
TGTTCTTCTTCATTAAAACATAACAAATAACATTTCAAGTCTCCCACAAC
ATCATCTCCTATTTGATTTTTCAATAATTCCTCAATAACTATATTCACAT
ATGTTCATGACTTGAAATATGCATATAATTGCCATGGAACATAAAAAGCA
AGGGAACTCAGTAATTATCCACCGAATAAGAAATGCCACTGACAACACAA
ACCCAATAGCCCCATAACTATACTGTGAATTCTCAAGCACTCTTCTGGTT
ATTTTGTCCTTGGTTTATAGAGAAATTTGTCCCACCAGCTTGAGCAGGAT
TCTGGTTACTCATTGAGGTTGGTTGCTGCGATGGAGCACTCTGGTTCTGA
GCCCAGAGCCTTCTCCTGTCGGCCTGTGTTGTTTCTCGACGCCGTGTGCG
TGGCCTTTGCTGCCTCTCAGTGAATCTATATTGTGGTCTATGGATAACTT
TGCCATCAACAAACAAATCCCCTCCATAATCTTTGTTGGGAACATCAATA
TATGAATCCGGCAAAACCCAAAGAACTCCAGGCTGACCTTTAACTTTGTA
AGAAAGCTCCTCATCAATAAGTGCACCAAACCCAGTATATGTCGTCGTAC
AGACTGAGTATATCTTCTTCTTCGCTTCCTCCTCACTGCCAACAACAGCA
GCGAGTGTTTTGACATAAGCGTTGATCATTTCCTCCTCACTGAGCCCTGA
GGGATTAGGAAACTCCATAACAATCAGCCAATGCTGGTAATCGCACCCGT
CGAGCATTATTGTCTCTTTCGGCGGCCGGTTGCTCCAATTCGGAGACGGG
TCGTTGAGGGGCGAGTAGCTCGAAC
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