CX672062

Overview
NameCX672062
Unique NameCX672062
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length868
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig1648 contig Csv1_Contig1648:1561..2428. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of CX672062 vs. ExPASy Swiss-Prot
Match: PP1R7_DICDI (Protein phosphatase 1 regulatory subunit pprA OS=Dictyostelium discoideum GN=pprA PE=3 SV=1)

HSP 1 Score: 74.7146 bits (182), Expect = 7.531e-13
Identity = 53/155 (34.19%), Postives = 83/155 (53.55%), Query Frame = -1
Query:  389 LRSVNLSNNFIVHIPTGSLPKGLHTLNLSRNKINTIEGLRELTRLRVLDLSYNRIFRIG-HGLSNCTLIKELYLAGNKISDIEGLHRLLKLTVLDMSFNKITTTKALGQLVANYQSLLALNLLGNPIQSNISDDQLRKAVCSLLPKLVYLNKQPI 850
            ++++ L +N +  I        + TL L RNKI  I+G+  L+ LR+L L  NR+  IG  GL     ++ELYL+ N I+DI+GL  L +L  LD+S NKI T   L +L    +     NL+ +    NI + Q+ K++     K +Y  + P+
Sbjct:  162 IKNLELGSNRLREIENLENLVNIETLWLGRNKITEIKGINHLSHLRILSLQSNRLTEIGVKGLVGLNCLEELYLSHNGITDIDGLQSLKQLRTLDISANKIKTLVGLNELPDLDEIWCNDNLVDS--MDNI-EQQVTKSI-----KCLYFERNPV 308          
BLAST of CX672062 vs. ExPASy Swiss-Prot
Match: YNZ9_CAEEL (Uncharacterized protein T09A5.9 OS=Caenorhabditis elegans GN=T09A5.9 PE=2 SV=1)

HSP 1 Score: 73.9442 bits (180), Expect = 1.285e-12
Identity = 63/199 (31.66%), Postives = 93/199 (46.73%), Query Frame = -1
Query:  329 ISHFSSLRSVNLSNNFIVHI-PTGSLPKGLHTLNLSRNKINTIEGLRELTRLRVLDLSYNRIFRIGHGLSNCTLIKELYLAGNKISDIEGLHRLLKLTVLDMSFNKITTTKALGQL------------------VANYQSLLALNLLGNPIQSNISDDQLRKAVCSLLPKLVYLNKQPIKPQRARELLTDSIAKAVLGN 868
            ++ F  +  + + NN +V I PT S    L +L+L  N++  I  L  L  L  LDLSYNRI +I +GL   T ++ LYL  NKI  IE L  L +L +L++  N+I   + +G L                  V   Q L  L+L GN I    + +QL         K +YL+ Q ++     E LT+ +   V  N
Sbjct:   54 LTGFPKIEELRMRNNLLVSISPTISSLVTLTSLDLYENQLTEISHLESLVNLVSLDLSYNRIRQI-NGLDKLTKLETLYLVSNKIEKIENLEALTQLKLLELGDNRIKKIENIGHLVNLDELFIGKNKIRQLEGVETLQKLSVLSLPGNRIVKIENVEQLNNL------KELYLSDQGLQDIHGVEPLTNLLLLDVANN 245          
BLAST of CX672062 vs. ExPASy Swiss-Prot
Match: LRC48_MACFA (Leucine-rich repeat-containing protein 48 OS=Macaca fascicularis GN=LRRC48 PE=2 SV=1)

HSP 1 Score: 72.7886 bits (177), Expect = 2.862e-12
Identity = 55/153 (35.95%), Postives = 76/153 (49.67%), Query Frame = -1
Query:  401 FSSLRSVNLSNNFIVHIPTGSLPKGLHTLNLSRNKINTIEGLRELTRLRVLDLSYNRIFRIGHGLSNCTLIKELYLAGNKISDIEGLHRLLKLTVLDMSFNKITTTKALGQLVANYQSLLALNLLGNPIQSNISDDQLRKAVCSLLPKLVYLN 859
            F  + S+ L    I+ I      + L  L L  N I  I GL  LT L  LDLS+N I  I  GL     +++L L  N+IS I+ L  L+KL VL +  N+I     +  L   +Q L  L+L GNPI      +  +  +C+ LP LVYL+
Sbjct:   42 FKDVLSLQLDFRNILRIDNLWQFENLRKLQLDNNIIEKIGGLENLTHLVWLDLSFNNIETI-EGLDTLVNLEDLSLFNNRISKIDSLDALVKLQVLSLGNNQIDNMMNIVYL-RRFQCLRTLSLSGNPIS---EAEDYKMFICAYLPDLVYLD 189          
BLAST of CX672062 vs. ExPASy Swiss-Prot
Match: PP1R7_PONAB (Protein phosphatase 1 regulatory subunit 7 OS=Pongo abelii GN=PPP1R7 PE=2 SV=1)

HSP 1 Score: 72.0182 bits (175), Expect = 4.882e-12
Identity = 57/171 (33.33%), Postives = 88/171 (51.46%), Query Frame = -1
Query:  362 ISHFSSLRSVNLSNNFIVHIPTGSLPKGLHTLNLSRNKINTIEGLRELTRLRVLDLSYNRIFRIGHGLSNCTLIKELYLAGNKISDIEGLHRLLKLTVLDMSFNKITTTKALGQLVANYQSLLALNLLGNPIQSNISDDQLRKAVCSLLPKLVYLNKQPIK--PQRARELL 868
            +S+   L+ + L +N I  I        L +L L +NKI  ++ L  LT L VL +  NR+ +I  GL N   ++ELYL+ N I  IEGL    KLT+LD++ N+I   + +  L    +  +  NLL      + SD    K   SL  + VYL + P++  PQ  R+++
Sbjct:  182 LSNLHQLQMLELGSNRIRAIENIDTLTNLESLFLGKNKITKLQNLDALTNLTVLSMQSNRLTKI-EGLQNLVNLQELYLSHNGIEVIEGLENNNKLTMLDIASNRIKKIENISHLTEPQEFWMNDNLL-----ESWSDLDELKGARSL--ETVYLERNPLQKDPQYRRKVM 344          
BLAST of CX672062 vs. ExPASy Swiss-Prot
Match: PP1R7_HUMAN (Protein phosphatase 1 regulatory subunit 7 OS=Homo sapiens GN=PPP1R7 PE=1 SV=1)

HSP 1 Score: 72.0182 bits (175), Expect = 4.882e-12
Identity = 57/171 (33.33%), Postives = 88/171 (51.46%), Query Frame = -1
Query:  362 ISHFSSLRSVNLSNNFIVHIPTGSLPKGLHTLNLSRNKINTIEGLRELTRLRVLDLSYNRIFRIGHGLSNCTLIKELYLAGNKISDIEGLHRLLKLTVLDMSFNKITTTKALGQLVANYQSLLALNLLGNPIQSNISDDQLRKAVCSLLPKLVYLNKQPIK--PQRARELL 868
            +S+   L+ + L +N I  I        L +L L +NKI  ++ L  LT L VL +  NR+ +I  GL N   ++ELYL+ N I  IEGL    KLT+LD++ N+I   + +  L    +  +  NLL      + SD    K   SL  + VYL + P++  PQ  R+++
Sbjct:  182 LSNLHQLQMLELGSNRIRAIENIDTLTNLESLFLGKNKITKLQNLDALTNLTVLSMQSNRLTKI-EGLQNLVNLRELYLSHNGIEVIEGLENNNKLTMLDIASNRIKKIENISHLTELQEFWMNDNLL-----ESWSDLDELKGARSL--ETVYLERNPLQKDPQYRRKVM 344          
BLAST of CX672062 vs. ExPASy Swiss-Prot
Match: PP1R7_MOUSE (Protein phosphatase 1 regulatory subunit 7 OS=Mus musculus GN=Ppp1r7 PE=1 SV=2)

HSP 1 Score: 71.2478 bits (173), Expect = 8.327e-12
Identity = 57/171 (33.33%), Postives = 88/171 (51.46%), Query Frame = -1
Query:  362 ISHFSSLRSVNLSNNFIVHIPTGSLPKGLHTLNLSRNKINTIEGLRELTRLRVLDLSYNRIFRIGHGLSNCTLIKELYLAGNKISDIEGLHRLLKLTVLDMSFNKITTTKALGQLVANYQSLLALNLLGNPIQSNISDDQLRKAVCSLLPKLVYLNKQPIK--PQRARELL 868
            IS+   L+ + L +N I  I        L +L L +NKI  ++ L  LT L VL +  NR+ +I  GL +   ++ELYL+ N I  IEGL    KLT+LD++ N+I   + +  L    +  +  NLL      + SD    K   SL  + VYL + P++  PQ  R+++
Sbjct:  183 ISNLHQLQMLELGSNRIRAIENIDTLTNLESLFLGKNKITKLQNLDALTNLTVLSVQSNRLAKI-EGLQSLVNLRELYLSNNGIEVIEGLENNNKLTMLDIASNRIKKIENISHLTELQEFWMNDNLL-----ESWSDLDELKGARSL--ETVYLERNPLQKDPQYRRKVM 345          
BLAST of CX672062 vs. ExPASy Swiss-Prot
Match: TLR11_MOUSE (Toll-like receptor 11 OS=Mus musculus GN=Tlr11 PE=2 SV=1)

HSP 1 Score: 70.8626 bits (172), Expect = 1.088e-11
Identity = 54/142 (38.03%), Postives = 84/142 (59.15%), Query Frame = -1
Query:  470 ISHFSSLRSVNLSNNFIVHIPTG---SLPKGLHTLNLSRNKINTIEGLRE---LTRLRVLDLSYNRIFRIGHG-LSNCTLIKELYLAGNKISDI--EGLHRLLKLTVLDMSFNKITTTKALGQLVANYQSLLALNLLGNPIQ 868
            I  + +L  ++L +N +  +PT    +LP+ L  LNLS NK+  I  L E    T L+VLDLSYN++  + HG LS  + ++EL+L+GN IS +  E L  L +L  LD+S+N+I   K     +++  +L  LNLLG  ++
Sbjct:  308 IPGYKALEFLSLHDNHLQTLPTRFLHTLPQ-LQKLNLSMNKLGPILELPEGLFSTNLKVLDLSYNQLCDVPHGALSLLSQLQELWLSGNNISSLSNESLQGLRQLRTLDLSWNQIKVLKP--GWLSHLPALTTLNLLGTYLE 446          
BLAST of CX672062 vs. ExPASy Swiss-Prot
Match: PP1R7_RAT (Protein phosphatase 1 regulatory subunit 7 OS=Rattus norvegicus GN=Ppp1r7 PE=1 SV=1)

HSP 1 Score: 70.4774 bits (171), Expect = 1.420e-11
Identity = 57/171 (33.33%), Postives = 87/171 (50.88%), Query Frame = -1
Query:  362 ISHFSSLRSVNLSNNFIVHIPTGSLPKGLHTLNLSRNKINTIEGLRELTRLRVLDLSYNRIFRIGHGLSNCTLIKELYLAGNKISDIEGLHRLLKLTVLDMSFNKITTTKALGQLVANYQSLLALNLLGNPIQSNISDDQLRKAVCSLLPKLVYLNKQPIK--PQRARELL 868
            IS    L+ + L +N I  I        L +L L +NKI  ++ L  L+ L VL +  NR+ +I  GL N   ++ELYL+ N I  IEGL    KLT+LD++ N+I   + +  L    +  +  NLL      + SD    K   SL  + VYL + P++  PQ  R+++
Sbjct:  182 ISTLQQLQMLELGSNRIRAIENIDTLTNLESLFLGKNKITKLQNLDALSNLTVLSMQSNRLTKI-EGLQNLVNLRELYLSHNGIEVIEGLENNNKLTMLDIASNRIKKIENISHLTELQEFWMNDNLL-----ESWSDLDELKGARSL--ETVYLERNPLQKDPQYRRKVM 344          
BLAST of CX672062 vs. ExPASy Swiss-Prot
Match: LRC50_PERPL (Leucine-rich repeat-containing protein 50 OS=Peromyscus polionotus GN=Lrrc50 PE=2 SV=1)

HSP 1 Score: 68.9366 bits (167), Expect = 4.133e-11
Identity = 64/230 (27.83%), Postives = 103/230 (44.78%), Query Frame = -1
Query:  242 SSLRSVNLSNNFIVHIPTGSLPKGLHTLNLSRNKINTIEGLRELTRLRVLDLSYNRIFRIGHGLSNCTLIKELYLAGNKISDIEGLHRLLKLTVLDMSFNKITTTKALGQLVANYQSLLALNLLGNPIQSNISDDQLRKAVCSLLPKLVYLNKQPIKPQ-------------------------RARELLTDSIAKAVLGNSSQSSQRKAVKRTGRSGSLPSSNQRSSTS 856
            S LR + L  N +  I      + L  LNLS N I TIE L  L  L  L +++NR+                      ++DI+ L   L+L VLD+S N ++  + L  ++ +   L  LNL+GNP+  +I +   R+ V   L +L YL+ +P+ P+                         R  + +TDS+ +A+     ++ +RK  +  G +  LP S + SSTS
Sbjct:  145 SELRCLFLQVNLLHKIENLEPLQKLDALNLSNNYIKTIENLSCLPVLNTLQMAHNRL--------------------ETVADIQHLRECLRLCVLDLSHNMLSDPEIL-SVLESMPCLRVLNLMGNPVTKHIPN--YRRTVTVRLKQLTYLDDRPVFPKDRACAEAWARGGYAAEKEERLQWESREHKKITDSL-EALAMIKRRAEERKKARDKGET-PLPDSEESSSTS 349          
BLAST of CX672062 vs. ExPASy Swiss-Prot
Match: LRC50_PERLE (Leucine-rich repeat-containing protein 50 OS=Peromyscus leucopus GN=Lrrc50 PE=2 SV=1)

HSP 1 Score: 68.9366 bits (167), Expect = 4.133e-11
Identity = 64/230 (27.83%), Postives = 103/230 (44.78%), Query Frame = -1
Query:  242 SSLRSVNLSNNFIVHIPTGSLPKGLHTLNLSRNKINTIEGLRELTRLRVLDLSYNRIFRIGHGLSNCTLIKELYLAGNKISDIEGLHRLLKLTVLDMSFNKITTTKALGQLVANYQSLLALNLLGNPIQSNISDDQLRKAVCSLLPKLVYLNKQPIKPQ-------------------------RARELLTDSIAKAVLGNSSQSSQRKAVKRTGRSGSLPSSNQRSSTS 856
            S LR + L  N +  I      + L  LNLS N I TIE L  L  L  L +++NR+                      ++DI+ L   L+L VLD+S N ++  + L  ++ +   L  LNL+GNP+  +I +   R+ V   L +L YL+ +P+ P+                         R  + +TDS+ +A+     ++ +RK  +  G +  LP S + SSTS
Sbjct:  145 SELRCLFLQVNLLHKIENLEPLQKLDALNLSNNYIKTIENLSCLPVLNTLQMAHNRL--------------------ETVADIQHLRECLRLCVLDLSHNMLSDPEIL-SVLESMPCLRVLNLMGNPVTKHIPN--YRRTVTVRLKQLTYLDDRPVFPKDRACAEAWARGGYAAEKEERLQWESREHKKITDSL-EALAMIKRRAEERKKARDKGET-PLPDSEESSSTS 349          
The following BLAST results are available for this feature:
BLAST of CX672062 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 14
Match NameE-valueIdentityDescription
PP1R7_DICDI7.531e-1334.19Protein phosphatase 1 regulatory subunit pprA OS=D... [more]
YNZ9_CAEEL1.285e-1231.66Uncharacterized protein T09A5.9 OS=Caenorhabditis ... [more]
LRC48_MACFA2.862e-1235.95Leucine-rich repeat-containing protein 48 OS=Macac... [more]
PP1R7_PONAB4.882e-1233.33Protein phosphatase 1 regulatory subunit 7 OS=Pong... [more]
PP1R7_HUMAN4.882e-1233.33Protein phosphatase 1 regulatory subunit 7 OS=Homo... [more]
PP1R7_MOUSE8.327e-1233.33Protein phosphatase 1 regulatory subunit 7 OS=Mus ... [more]
TLR11_MOUSE1.088e-1138.03Toll-like receptor 11 OS=Mus musculus GN=Tlr11 PE=... [more]
PP1R7_RAT1.420e-1133.33Protein phosphatase 1 regulatory subunit 7 OS=Ratt... [more]
LRC50_PERPL4.133e-1127.83Leucine-rich repeat-containing protein 50 OS=Perom... [more]
LRC50_PERLE4.133e-1127.83Leucine-rich repeat-containing protein 50 OS=Perom... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS10_14G01_b Madame Vinous Sweet Orange Multiple Pathogen-Infected cDNA Library UCRCS10 Citrus sinensis cDNA clone UCRCS10-14G01-M2-6.b, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX672062 ID=CX672062; Name=CX672062; organism=Citrus sinensis; type=EST; length=868bp
TTTTTAAAGGGAAAAAGAATAAGATATTTTCCTTAGTCTCGAGGTGAATA
AGAAGAAAACTTGAGCTTTTAGGCAGTTTACTCAAGGATGCAAAACATCA
AGCCGTAAAAGAAACATGCAAGGTGACACACTACCGAGATGAAGAAGCTT
GTGCAGATGATACCATCTTTGAGACTACCGTCTTCGAGGCCAAATGGCTA
TGATTTCGGGTCTTGGACTTGCTCCTGCTTCTCTGCCCAATGCTCGTACT
GCTCCTTTGATTGCTGGAGGGTAGTGATCCACTTCGGCCTGTTCTCTTTA
CTGCTTTTCTTTGAGAGCTCTGACTACTGTTTCCAAGTACAGCTTTGGCA
ATGCTATCTGTGAGCAACTCTCGTGCTCTTTGTGGTTTGATGGGCTGCTT
GTTTAGATACACAAGTTTAGGAAGGAGACTACAGACTGCCTTGCGCAGCT
GGTCGTCACTGATGTTGCTCTGAATGGGATTACCCAACAGGTTCAGAGCT
AGCAATGACTGGTAATTAGCCACTAGCTGACCAAGAGCTTTTGTAGTAGT
TATCTTGTTGAAGCTCATGTCTAGGACAGTCAACTTCAAAAGCCTATGCA
GTCCCTCAATGTCACTAATCTTGTTCCCAGCAAGATAAAGTTCCTTAATT
AGTGTACAGTTTGACAAGCCATGCCCAATGCGAAAAATACGGTTATAACT
AAGATCAAGGACTCGCAATCGGGTCAGTTCTCGTAGTCCTTCAATAGTGT
TGATCTTGTTTCTTGACAAATTGAGTGTGTGAAGGCCCTTCGGCAGTGAT
CCTGTGGGTATGTGGACTATAAAGTTGTTCGACAAGTTGACAGACCGGAG
ACTGGAGAAATGCGAGAT
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