EG358314

Overview
NameEG358314
Unique NameEG358314
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length577
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig6864 contig Csv1_Contig6864:1..577. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of EG358314 vs. ExPASy Swiss-Prot
Match: TT12_ARATH (Protein TRANSPARENT TESTA 12 OS=Arabidopsis thaliana GN=TT12 PE=2 SV=1)

HSP 1 Score: 173.711 bits (439), Expect = 5.626e-43
Identity = 90/187 (48.13%), Postives = 120/187 (64.17%), Query Frame = 3
Query:    6 QILVLLAGLLPNPELALDSLSICMTISGWVFMISVGFNAAASVRVSNELGAANPKSASFSVVMVTLVSFVISVMAAIIILALRDVISYAFTGGEAVAAAVSDLCPLLALTLILNGIQPVLSGVAVGCGWQTFXXXXXXXXXXXXXXXXXSLLGFYFNLGAKGIWSGMIGGTVMQTLILIWVTFRTDW 566
            Q LV+++GLL NP ++LD++SICM    W     +G +AA SVRVSNELGA NP+ A  SVV+V + + +IS +  +I+L  R  +S AFT    V AAVSDL PLLA+++ LNGIQP+LSGVA+G GWQ                    +LGF  +LG  GIW GMI G ++QTL LI +T +T+W
Sbjct:  295 QGLVIISGLLSNPTISLDAISICMYYLNWDMQFMLGLSAAISVRVSNELGAGNPRVAMLSVVVVNITTVLISSVLCVIVLVFRVGLSKAFTSDAEVIAAVSDLFPLLAVSIFLNGIQPILSGVAIGSGWQAVVAYVNLVTYYVIGLPIGCVLGFKTSLGVAGIWWGMIAGVILQTLTLIVLTLKTNW 481          
BLAST of EG358314 vs. ExPASy Swiss-Prot
Match: S47A1_DANRE (Multidrug and toxin extrusion protein 1 OS=Danio rerio GN=slc47a1 PE=2 SV=1)

HSP 1 Score: 88.1965 bits (217), Expect = 3.108e-17
Identity = 54/189 (28.57%), Postives = 87/189 (46.03%), Query Frame = 3
Query:    3 FQILVLLAGLLPNPELALDSLSICMTISGWVFMISVGFNAAASVRVSNELGAANPKSASFSVVMVTLVSFVISVMAAIIILALRDVISYAFTGGEAVAAAVSDLCPLLALTLILNGIQPVLSGVAVGCGWQTFXXXXXXXXXXXXXXXXXSLLGFYFNLGAKGIWSGMIGGTVMQTLILIWVTFRTDWK 569
            ++I   LAGL+   EL   S  +   ++   +M  +GF  AASVRV N LGA N + A  S  +  +   ++S + A +I   +DVI+Y FT  E + + VS +  +     + + I  +  G+  G G Q                     L F  ++G  G+W G  G   +Q+L  I + ++ DWK
Sbjct:  295 YEIGGFLAGLISETELGAQS--VVYELATIAYMFPLGFAVAASVRVGNALGAGNTERAKLSAKVALVCGVLVSCVVATLIGCTKDVIAYIFTTEEEIVSRVSQVMIMYGFFHLFDAIAGITGGIVRGAGKQLLGALCNIVGYYFVGFPTGVSLMFALSMGIIGLWIGFFGCVFLQSLFFIILIYKLDWK 481          
BLAST of EG358314 vs. ExPASy Swiss-Prot
Match: S47A2_MOUSE (Multidrug and toxin extrusion protein 2 OS=Mus musculus GN=Slc47a2 PE=1 SV=1)

HSP 1 Score: 86.6557 bits (213), Expect = 9.044e-17
Identity = 56/188 (29.79%), Postives = 86/188 (45.74%), Query Frame = 3
Query:    3 FQILVLLAGLLPNPELALDSLSICMTISGWVFMISVGFNAAASVRVSNELGAANPKSASFSVVMVTLVSFVISVMAAIIILALRDVISYAFTGGEAVAAAVSDLCPLLALTLILNGIQPVLSGVAVGCGWQTFXXXXXXXXXXXXXXXXXSLLGFYFNLGAKGIWSGMIGGTVMQTLILIWVTFRTDW 566
            F+I   LAGL+   EL   +  +   ++   +M+  GF  AASVRV N LGA N   A  S   V L + V +++  I++ AL+DV++Y FT  + + + VS + P+ A   + + +     GV  G G Q                     L F   LG  G+W+G+I     Q    +    RT+W
Sbjct:  286 FEIGTFLAGLVNVTELGAQA--VIYELASVAYMVPFGFGVAASVRVGNALGAGNADQARCSCTTVLLCAGVCALLVGILLAALKDVVAYIFTNDKDIISLVSQVMPIFAPFHLFDALAGTCGGVLRGTGKQKIGAVLNTIGYYGFGFPIGVSLMFAAKLGIIGLWAGLIVCVSFQAFSYLIYILRTNW 471          
BLAST of EG358314 vs. ExPASy Swiss-Prot
Match: S47A1_MOUSE (Multidrug and toxin extrusion protein 1 OS=Mus musculus GN=Slc47a1 PE=1 SV=2)

HSP 1 Score: 86.2705 bits (212), Expect = 1.181e-16
Identity = 55/189 (29.10%), Postives = 90/189 (47.62%), Query Frame = 3
Query:    3 FQILVLLAGLLPNPELALDSLSICMTISGWVFMISVGFNAAASVRVSNELGAANPKSASFSVVMVTLVSFVISVMAAIIILALRDVISYAFTGGEAVAAAVSDLCPLLALTLILNGIQPVLSGVAVGCGWQTFXXXXXXXXXXXXXXXXXSLLGFYFNLGAKGIWSGMIGGTVMQTLILIWVTFRTDWK 569
            +++   L+G+L   EL   S++  + I   V+MI  GF+ AA+VRV N LGA N   A  S  +  +V+ + +V   +++L  +D++ Y FT    + A V+ + P+ A++ +  G+     G+  G G Q                     L F   LG  G+WSG+I  T  QT   +    R +WK
Sbjct:  277 YEVGSFLSGILGMVELGAQSITYELAII--VYMIPSGFSVAANVRVGNALGAGNIDQAKKSSAISLIVTELFAVTFCVLLLGCKDLVGYIFTTDRDIVALVAQVIPIYAVSHLFEGLACTCGGILRGTGNQKVGAIVNAIGYYVIGLPIGIALMFAAKLGVIGLWSGIIICTTCQTTCFLAFIARLNWK 463          
BLAST of EG358314 vs. ExPASy Swiss-Prot
Match: S47A1_XENTR (Multidrug and toxin extrusion protein 1 OS=Xenopus tropicalis GN=slc47a1 PE=2 SV=1)

HSP 1 Score: 83.5741 bits (205), Expect = 7.656e-16
Identity = 52/189 (27.51%), Postives = 92/189 (48.68%), Query Frame = 3
Query:    3 FQILVLLAGLLPNPELALDSLSICMTISGWVFMISVGFNAAASVRVSNELGAANPKSASFSVVMVTLVSFVISVMAAIIILALRDVISYAFTGGEAVAAAVSDLCPLLALTLILNGIQPVLSGVAVGCGWQTFXXXXXXXXXXXXXXXXXSLLGFYFNLGAKGIWSGMIGGTVMQTLILIWVTFRTDWK 569
            F+I + LAG+L   +LA  ++   + I   V++I +G   A S+RV + LGA N + A  S ++V  ++ + ++++ I++  L+DV++Y FT    + A VS + P+ +  L+ +       G+  G G                       L F   LG  G W G++   + Q++ LI   F+ DWK
Sbjct:  291 FEISMFLAGVLGMVDLAAQAIIYQVAIV--VYLIPLGLCIAGSIRVGHGLGAGNTEQAKRSALVVLCMTELCALLSGILLATLKDVVAYIFTSDPNIVALVSYVLPVYSACLLFDACVAACGGILRGSGKLKVGAISHTVGYYVIGLPLGISLMFAAKLGIIGFWFGILACGIAQSIFLIIFVFKIDWK 477          
BLAST of EG358314 vs. ExPASy Swiss-Prot
Match: S47A1_RAT (Multidrug and toxin extrusion protein 1 OS=Rattus norvegicus GN=Slc47a1 PE=1 SV=1)

HSP 1 Score: 83.5741 bits (205), Expect = 7.656e-16
Identity = 55/189 (29.10%), Postives = 90/189 (47.62%), Query Frame = 3
Query:    3 FQILVLLAGLLPNPELALDSLSICMTISGWVFMISVGFNAAASVRVSNELGAANPKSASFSVVMVTLVSFVISVMAAIIILALRDVISYAFTGGEAVAAAVSDLCPLLALTLILNGIQPVLSGVAVGCGWQTFXXXXXXXXXXXXXXXXXSLLGFYFNLGAKGIWSGMIGGTVMQTLILIWVTFRTDWK 569
            +++   L+G+L   EL   S++  + I   V+MI  GF+ AA+VRV N LGA N   A  S  +  +V+ + +V   +++L  +D++ Y FT    + A V+ + P+ A++ +   +     GV  G G Q                     L F   LG  G+WSG+I  +V QT   +    R +WK
Sbjct:  276 YEVGSFLSGILGMVELGAQSITYELAII--VYMIPAGFSVAANVRVGNALGAGNIDQAKKSSAISLIVTELFAVTFCVLLLGCKDLVGYIFTTDWDIVALVAQVVPIYAVSHLFEALACTCGGVLRGTGNQKVGAIVNAIGYYVIGLPIGISLMFVAKLGVIGLWSGIIICSVCQTSCFLVFIARLNWK 462          
BLAST of EG358314 vs. ExPASy Swiss-Prot
Match: S47A1_RABIT (Multidrug and toxin extrusion protein 1 OS=Oryctolagus cuniculus GN=SLC47A1 PE=2 SV=1)

HSP 1 Score: 83.1889 bits (204), Expect = 1.000e-15
Identity = 51/188 (27.13%), Postives = 91/188 (48.40%), Query Frame = 3
Query:    3 FQILVLLAGLLPNPELALDSLSICMTISGWVFMISVGFNAAASVRVSNELGAANPKSASFSVVMVTLVSFVISVMAAIIILALRDVISYAFTGGEAVAAAVSDLCPLLALTLILNGIQPVLSGVAVGCGWQTFXXXXXXXXXXXXXXXXXSLLGFYFNLGAKGIWSGMIGGTVMQTLILIWVTFRTDW 566
            ++I   L+G+L   EL   S++  + +   V+MI +G + A +VRV N LGA N + A  S  +  LV+ +I+V+  +++L+ +D++ Y FT    + A V+ + P+ A++ +   +     G+  G G Q F                   L F   LG  G+W G++   V Q +  +    R +W
Sbjct:  276 YEIGSFLSGILGMVELGAQSVTYELAVI--VYMIPMGLSVAVNVRVGNALGAGNIEQAKKSSAVALLVTELIAVVFCVMLLSCKDLVGYIFTSDRDIIALVAQVTPIYAVSHLFESLAGTSGGILRGSGNQKFGAIVNAIGYYVVGLPIGIALMFAAKLGVIGLWLGIVVCAVSQAVCFLGFIARLNW 461          
BLAST of EG358314 vs. ExPASy Swiss-Prot
Match: YL47_SCHPO (Uncharacterized transporter C323.07c OS=Schizosaccharomyces pombe GN=SPAC323.07c PE=1 SV=1)

HSP 1 Score: 82.8037 bits (203), Expect = 1.306e-15
Identity = 57/188 (30.32%), Postives = 82/188 (43.62%), Query Frame = 3
Query:    3 FQILVLLAGLLPNPELALDSLSICMTISGWVFMISVGFNAAASVRVSNELGAANPKSASFSVVMVTLVSFVISVMAAIIILALRDVISYAFTGGEAVAAAVSDLCPLLALTLILNGIQPVLSGVAVGCGWQTFXXXXXXXXXXXXXXXXXSLLGFYFNLGAKGIWSGMIGGTVMQTLILIWVTFRTDW 566
            +++  L AG L    LA  S SI +T +  +F I   F  A+S RV + +G+     A     +   ++  IS+    +I   RDV    FT    V A V D+ P+L+L ++ +G+  V  G+  G G Q                     +  YFN G KGIW GMI  +V        V F TDW
Sbjct:  334 YEMTSLGAGYLGTAPLA--SQSILLTSTSLLFQIPFAFAVASSTRVGHLIGSGRANLARLCSRVAYSLALCISIFDGSLIFCFRDVWGSLFTSDPEVLAVVKDIFPILSLFIVTDGLNAVGGGLLRGTGKQYIGGLISIGSSYLFALPVTVFVVVYFNTGLKGIWCGMILSSVTAITCQFTVLFNTDW 519          
BLAST of EG358314 vs. ExPASy Swiss-Prot
Match: S47A1_PONAB (Multidrug and toxin extrusion protein 1 OS=Pongo abelii GN=SLC47A1 PE=2 SV=1)

HSP 1 Score: 82.0333 bits (201), Expect = 2.228e-15
Identity = 52/189 (27.51%), Postives = 90/189 (47.62%), Query Frame = 3
Query:    3 FQILVLLAGLLPNPELALDSLSICMTISGWVFMISVGFNAAASVRVSNELGAANPKSASFSVVMVTLVSFVISVMAAIIILALRDVISYAFTGGEAVAAAVSDLCPLLALTLILNGIQPVLSGVAVGCGWQTFXXXXXXXXXXXXXXXXXSLLGFYFNLGAKGIWSGMIGGTVMQTLILIWVTFRTDWK 569
            +++   L+G+L   EL   S+   + I   V+M+  GF+ AASVRV N LGA + + A  S  +  L++ + +V  ++++L+ +D + Y FT    +   V+ + P+ A++ +   +     GV  G G Q                     L F   LG  G+WSG+I  TV Q +  +    + +WK
Sbjct:  277 YEVGSFLSGILGMVELGAQSIVYELAII--VYMVPAGFSVAASVRVGNALGAGDMEQARKSSTVSLLITVLFAVAFSVLLLSCKDHVGYIFTTDRDIINLVAQVVPIYAVSHLFEALACTSGGVLRGSGNQKVGAIVNTIGYYVVGLPIGIALMFATKLGVMGLWSGIIICTVFQAVCFLGFIIQLNWK 463          
BLAST of EG358314 vs. ExPASy Swiss-Prot
Match: S47A1_HUMAN (Multidrug and toxin extrusion protein 1 OS=Homo sapiens GN=SLC47A1 PE=1 SV=1)

HSP 1 Score: 82.0333 bits (201), Expect = 2.228e-15
Identity = 52/189 (27.51%), Postives = 90/189 (47.62%), Query Frame = 3
Query:    3 FQILVLLAGLLPNPELALDSLSICMTISGWVFMISVGFNAAASVRVSNELGAANPKSASFSVVMVTLVSFVISVMAAIIILALRDVISYAFTGGEAVAAAVSDLCPLLALTLILNGIQPVLSGVAVGCGWQTFXXXXXXXXXXXXXXXXXSLLGFYFNLGAKGIWSGMIGGTVMQTLILIWVTFRTDWK 569
            +++   L+G+L   EL   S+   + I   V+M+  GF+ AASVRV N LGA + + A  S  +  L++ + +V  ++++L+ +D + Y FT    +   V+ + P+ A++ +   +     GV  G G Q                     L F   LG  G+WSG+I  TV Q +  +    + +WK
Sbjct:  277 YEVGSFLSGILGMVELGAQSIVYELAII--VYMVPAGFSVAASVRVGNALGAGDMEQARKSSTVSLLITVLFAVAFSVLLLSCKDHVGYIFTTDRDIINLVAQVVPIYAVSHLFEALACTSGGVLRGSGNQKVGAIVNTIGYYVVGLPIGIALMFATTLGVMGLWSGIIICTVFQAVCFLGFIIQLNWK 463          
The following BLAST results are available for this feature:
BLAST of EG358314 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 14
Match NameE-valueIdentityDescription
TT12_ARATH5.626e-4348.13Protein TRANSPARENT TESTA 12 OS=Arabidopsis thalia... [more]
S47A1_DANRE3.108e-1728.57Multidrug and toxin extrusion protein 1 OS=Danio r... [more]
S47A2_MOUSE9.044e-1729.79Multidrug and toxin extrusion protein 2 OS=Mus mus... [more]
S47A1_MOUSE1.181e-1629.10Multidrug and toxin extrusion protein 1 OS=Mus mus... [more]
S47A1_XENTR7.656e-1627.51Multidrug and toxin extrusion protein 1 OS=Xenopus... [more]
S47A1_RAT7.656e-1629.10Multidrug and toxin extrusion protein 1 OS=Rattus ... [more]
S47A1_RABIT1.000e-1527.13Multidrug and toxin extrusion protein 1 OS=Oryctol... [more]
YL47_SCHPO1.306e-1530.32Uncharacterized transporter C323.07c OS=Schizosacc... [more]
S47A1_PONAB2.228e-1527.51Multidrug and toxin extrusion protein 1 OS=Pongo a... [more]
S47A1_HUMAN2.228e-1527.51Multidrug and toxin extrusion protein 1 OS=Homo sa... [more]

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Properties
Property NameValue
Genbank description5b5 Citrus sinensis flesh suppression subtractive hybridization (SSH) cDNA library Moro nucellare 58-8D-I cultivar Citrus sinensis cDNA clone Cl0005b5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EG358314 ID=EG358314; Name=EG358314; organism=Citrus sinensis; type=EST; length=577bp
ACTTTCAGATTCTTGTTCTATTGGCTGGTTTGTTACCAAATCCGGAGTTG
GCTTTGGACTCTCTTTCCATTTGCATGACGATATCCGGATGGGTGTTTAT
GATATCGGTCGGGTTTAATGCAGCTGCTAGTGTTAGAGTCAGCAATGAGC
TAGGAGCGGCGAATCCAAAATCGGCGTCGTTTTCAGTGGTAATGGTGACG
TTAGTTTCCTTCGTGATCTCCGTGATGGCGGCGATAATCATTCTAGCCCT
ACGTGATGTCATCAGCTACGCCTTCACTGGAGGCGAAGCGGTTGCCGCAG
CCGTCTCCGACCTCTGTCCGCTTCTTGCTTTGACCCTGATTCTTAACGGC
ATCCAGCCTGTCTTGTCCGGTGTGGCTGTTGGGTGCGGATGGCAAACATT
TGTGGCGTATGTGAACGTGGGATGCTATTACGTCGTTGGGGTTCCAGTAG
GTTCACTTCTCGGTTTCTACTTCAATCTTGGTGCTAAGGGAATATGGTCT
GGGATGATTGGCGGCACGGTGATGCAAACTTTAATTCTGATATGGGTGAC
ATTTCGAACAGACTGGAAATAAAGANG
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