CX671959

Overview
NameCX671959
Unique NameCX671959
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length901
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig3768 contig Csv1_Contig3768:820..1719. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of CX671959 vs. ExPASy Swiss-Prot
Match: E137_ARATH (Glucan endo-1,3-beta-glucosidase 7 OS=Arabidopsis thaliana GN=At4g34480 PE=1 SV=2)

HSP 1 Score: 300.442 bits (768), Expect = 8.976e-81
Identity = 146/215 (67.91%), Postives = 164/215 (76.28%), Query Frame = -1
Query:  257 ALNAMGFKDVEIVVAETGWPYRGDPNEVGPSVENAKAYNGNLIAHLRSMAGTPLMPGKSVDTYIFALYDEDLKPGPAFERSFGLFKPDLSAAYDVGISKSSQXXXXXXXXXXXXXXXXXXXXXXXAGWCVPKAGISDAQLQASLDYACSQGIDCSPIQPGGACFEPNTVASHAAFAMNLYYQTSAKNPWNCDFSKTATLTSQNPSYNGCVYPSGG 901
            AL +MGF+ VEIVVAETGW  RGD NEVG SV+NAKAYNGNLIAHLRSM GTPLMPGK VDTYIFALYDE+LKPGP+ ER+FGLFK DLS  YDVG++KSS                        +GWCVPK G ++ +LQASLD+AC  GIDC  IQPGGACFEPN V SHAA+AMN+Y+Q S K P +CDFSKTAT+TSQNPSYN CVYP GG
Sbjct:  249 ALKSMGFEKVEIVVAETGWASRGDANEVGASVDNAKAYNGNLIAHLRSMVGTPLMPGKPVDTYIFALYDENLKPGPSSERAFGLFKTDLSMVYDVGLAKSSS------------SSQTPSGKVTSSGWCVPKKGATNEELQASLDWACGHGIDCGAIQPGGACFEPNNVVSHAAYAMNMYFQKSPKQPTDCDFSKTATVTSQNPSYNNCVYPGGG 451          
BLAST of CX671959 vs. ExPASy Swiss-Prot
Match: E13B_WHEAT (Glucan endo-1,3-beta-glucosidase OS=Triticum aestivum GN=GLC1 PE=2 SV=1)

HSP 1 Score: 187.193 bits (474), Expect = 1.107e-46
Identity = 86/213 (40.38%), Postives = 122/213 (57.28%), Query Frame = -1
Query:  263 ALNAMGFKDVEIVVAETGWPYRGDPNEVGPSVENAKAYNGNLIAHLRSMAGTPLMPGKSVDTYIFALYDEDLKPGPAFERSFGLFKPDLSAAYDVGISKSSQXXXXXXXXXXXXXXXXXXXXXXXAGWCVPKAGISDAQLQASLDYACSQGIDCSPIQPGGACFEPNTVASHAAFAMNLYYQTSAKNPWNCDFSKTATLTSQNPSYNGCVYPS 901
            A+  +G+ DV+I V E GWP + +P ++G  V+ A+ +N  +I    S  GTPLMP ++ +TY+F+L+DE+ KPGP  ER FGLF PD +  YD+G+ +                            WCV K G +   LQ +++YAC   +DC PIQ GGACF PN++ +HA++ MN YYQ +      CDF  T  +TS +PSY GC Y S
Sbjct:  250 AMKKLGYGDVDIAVGEAGWPTQAEPGQIGVGVQEARDFNEGMIRVCSSGKGTPLMPNRTFETYLFSLFDENQKPGPIAERHFGLFNPDFTPVYDLGLLRDGASVAPTPSPNPSPNPSPKPAPSGGGKWCVAKDGANGTDLQNNINYACG-FVDCKPIQSGGACFSPNSLQAHASYVMNAYYQANGHTDLACDFKGTGIVTSSDPSYGGCKYVS 461          
BLAST of CX671959 vs. ExPASy Swiss-Prot
Match: E133_ARATH (Glucan endo-1,3-beta-glucosidase 3 OS=Arabidopsis thaliana GN=At2g01630 PE=1 SV=2)

HSP 1 Score: 161.77 bits (408), Expect = 4.982e-39
Identity = 80/219 (36.53%), Postives = 122/219 (55.71%), Query Frame = -1
Query:  248 ALNAMGFKDVEIVVAETGWPYRGDPNEVGPSVENAKAYNGNLIAHLRSMAGTPLMPGKSVDTYIFALYDEDLKPGPAFERSFGLFKPDLSAAYDVGISKSSQXXXXXXXXXXXXXXXXXXXXXXXAGWCVPKAGISDAQLQASLDYACSQG-IDCSPIQPGGACFEPNTVASHAAFAMNLYYQTSAKNPWNCDFSKTATLTSQNPSYNGCVYPSGGT*N 901
            A++ + F ++ IVV E+GWP +G P+E   +VENA  YN NLI H+ +  GTP  PG +V TYI+ LY+ED +PGP  E+++GLF  + +  Y + ++ +                           +C+ K  +    LQA+LD+AC  G +DCS +  G +C+EP+ V +H+ +A N YYQ   K   +CDF   AT+T+ +PS   CV+P     N
Sbjct:  248 AMSYLNFTNIPIVVTESGWPSKGGPSEHDATVENANTYNSNLIQHVINKTGTPKHPGTAVTTYIYELYNEDTRPGPVSEKNWGLFYTNGTPVYTLRLAGAGAILANDTTNQT---------------FCIAKEKVDRKMLQAALDWACGPGKVDCSALMQGESCYEPDDVVAHSTYAFNAYYQKMGKASGSCDFKGVATVTTTDPSRGTCVFPGSAKSN 451          
BLAST of CX671959 vs. ExPASy Swiss-Prot
Match: E1312_ARATH (Glucan endo-1,3-beta-glucosidase 12 OS=Arabidopsis thaliana GN=At4g29360 PE=1 SV=1)

HSP 1 Score: 159.073 bits (401), Expect = 3.230e-38
Identity = 82/227 (36.12%), Postives = 120/227 (52.86%), Query Frame = -1
Query:  269 ALNAMGFKDVEIVVAETGWPYRGDPNEVGPSVENAKAYNGNLIAHLRSMAGTPLMPGKSVDTYIFALYDEDLKPGPAFERSFGLFKP--------DLSAAYDVGISKSSQXXXXXXXXXXXXXXXXXXXXXXXAG-------WCVPKAGISDAQLQASLDYACSQG-IDCSPIQPGGACFEPNTVASHAAFAMNLYYQTSAKNPWNCDFSKTATLTSQNPSYNGCVY 901
            AL AM FK V+++V E+GWP +G P E   + ENA AYN NLI H+    GTP  PG+ +D Y+F+L++E+ KPG   ER++G+F          D +      +S ++                         G       WC+  +  S  +LQ +LD+AC  G +DCS +QP   CFEP+TV SHA++A N YYQ S  +  +C F+  +    ++PSY  C+Y
Sbjct:  249 ALTAMSFKTVKVMVTESGWPSKGSPKETAATPENALAYNTNLIRHVIGDPGTPAKPGEEIDVYLFSLFNENRKPGIESERNWGMFYANGTNVYALDFTGENTTPVSPTNSTTGTSPSPSSSPIINGNSTVTIGGGGGGGTKKWCIASSQASVTELQTALDWACGPGNVDCSAVQPDQPCFEPDTVLSHASYAFNTYYQQSGASSIDCSFNGASVEVDKDPSYGNCLY 475          
BLAST of CX671959 vs. ExPASy Swiss-Prot
Match: E1313_ARATH (Glucan endo-1,3-beta-glucosidase 13 OS=Arabidopsis thaliana GN=At5g56590 PE=1 SV=1)

HSP 1 Score: 158.688 bits (400), Expect = 4.218e-38
Identity = 84/256 (32.81%), Postives = 137/256 (53.52%), Query Frame = -1
Query:  164 ALNAMGFKDVEIVVAETGWPYRGDPNE-VGPSVENAKAYNGNLIAHLRSMAGTPLMPGKSVDTYIFALYDEDLKPGPAFERSFGLFKPDLSAAYDVGISKSSQXXXXXXXXXXXXXXXXXXXXXXXAGWCVPKAGISDAQLQASLDYACSQG-IDCSPIQPGGACFEPNTVASHAAFAMNLYYQTSAKNPWNCDFSKTATLTSQNPSYNGCVY-PSGGT*NGQTNSQLMLN-------NGMLSEIKVMNLMVPILY 901
            AL A+ F+ ++I+V ETGWP +G P E    S +NA+ YN N+I H+ +  GTP  PG++++ YIF+L++E+ K G   ER++GLF PD ++ Y +  +  S                          WC+  +  S+  L+ +LD+AC  G +DC+ IQP   CF+P+T+ SHA+F  N Y+Q +      C F       +++PSY+ C+Y  +GG     TN+  + +       N +L  I  + LM+ + +
Sbjct:  249 ALTALNFRTIKIMVTETGWPTKGSPKEKAAASSDNAETYNSNIIRHVVTNQGTPAKPGEAMNVYIFSLFNENRKAGLDSERNWGLFYPDQTSVYQLDFTGKSN--------GFHSNSSGTNSSGSSNSWCIASSKASERDLKGALDWACGPGNVDCTAIQPSQPCFQPDTLVSHASFVFNSYFQQNRATDVACSFGGAGVKVNKDPSYDKCIYITAGGNKTKATNATALTSSASTPRGNELLQWILKLCLMISLFF 496          
BLAST of CX671959 vs. ExPASy Swiss-Prot
Match: E132_ARATH (Glucan endo-1,3-beta-glucosidase 2 OS=Arabidopsis thaliana GN=At1g66250 PE=1 SV=2)

HSP 1 Score: 152.14 bits (383), Expect = 3.948e-36
Identity = 78/226 (34.51%), Postives = 126/226 (55.75%), Query Frame = -1
Query:  227 ALNAMGFKDVEIVVAETGWPYRGDPNEVGPSVENAKAYNGNLIAHLRSMAGTPLMPGKSVDTYIFALYDEDLKPGPAFERSFGLFKPDLSAAYDVGISKSSQXXXXXXXXXXXXXXXXXXXXXXXAGWCVPKAGISDAQLQASLDYACSQG-IDCSPIQPGGACFEPNTVASHAAFAMNLYYQTSAKNPWNCDFSKTATLTSQNPSYNGCVYPSGGT*NGQTNSQL 901
            A+  + F ++ ++V E+GWP +G+ NE   +++NA  YN NLI H+ +  GTP  PG +V TYI+ LY+ED K G + E+++GLF  +    Y + ++ S                           +C  + G     LQA+LD+AC  G IDCSPI+ G  C+EP+ V +HA +A + YY  +  NP  C+F+  A++T+ +PS+  CV+ +G   NG+  + +
Sbjct:  257 AMAFLNFTNIPVLVTESGWPSKGETNEPDATLDNANTYNSNLIRHVLNKTGTPKRPGIAVSTYIYELYNEDTKAGLS-EKNWGLFNANGEPVYVLRLTNSGSVLANDTTNQT---------------YCTAREGADTKMLQAALDWACGPGKIDCSPIKQGETCYEPDNVVAHANYAFDTYYHQTGNNPDACNFNGVASITTTDPSHGTCVF-AGSRGNGRNGTSV 465          
BLAST of CX671959 vs. ExPASy Swiss-Prot
Match: E131_ARATH (Glucan endo-1,3-beta-glucosidase 1 OS=Arabidopsis thaliana GN=At1g11820 PE=1 SV=2)

HSP 1 Score: 150.599 bits (379), Expect = 1.149e-35
Identity = 75/213 (35.21%), Postives = 114/213 (53.52%), Query Frame = -1
Query:  266 ALNAMGFKDVEIVVAETGWPYRGDPNEVGPSVENAKAYNGNLIAHLRSMAGTPLMPGKSVDTYIFALYDEDLKPGPAFERSFGLFKPDLSAAYDVGISKSSQXXXXXXXXXXXXXXXXXXXXXXXAGWCVPKAGISDAQLQASLDYACSQG-IDCSPIQPGGACFEPNTVASHAAFAMNLYYQTSAKNPWNCDFSKTATLTSQNPSYNGCVYP 901
            ++  +   DV ++V E+GWP +GD  E   +++NA  YN NLI H+    GTPL P  +   YI+ L++EDL+  P  E S+GLF  + +  Y + +S S                           +C+   G+    LQA+LD+AC  G  +CS IQPG +C++PN V  HA+FA N YYQ   +   +CDF   A +T+ +PS+  C++P
Sbjct:  160 SMKNLNVSDVAVLVTESGWPSKGDSKEPYATIDNADTYNSNLIKHVFDRTGTPLHPEMTSSVYIYELFNEDLRAPPVSEASWGLFYGNSTPVYLLHVSGSGTFLANDTTNQT---------------YCIAMDGVDAKTLQAALDWACGPGRSNCSEIQPGESCYQPNNVKGHASFAFNSYYQKEGRASGSCDFKGVAMITTTDPSHGSCIFP 357          
BLAST of CX671959 vs. ExPASy Swiss-Prot
Match: E134_ARATH (Glucan endo-1,3-beta-glucosidase 4 OS=Arabidopsis thaliana GN=At3g13560 PE=1 SV=1)

HSP 1 Score: 147.517 bits (371), Expect = 9.724e-35
Identity = 77/212 (36.32%), Postives = 113/212 (53.30%), Query Frame = -1
Query:  269 ALNAMGFKDVEIVVAETGWPYRGDPNEVGPSVENAKAYNGNLIAHLRSMAGTPLMPGKSVDTYIFALYDEDLKPGPAFERSFGLFKPDLSAAYDVGISKSSQXXXXXXXXXXXXXXXXXXXXXXXAGWCVPKAGISDAQLQASLDYACSQG-IDCSPIQPGGACFEPNTVASHAAFAMNLYYQTSAKNPWNCDFSKTATLTSQNPSYNGCVY 901
            ++ A+ F  + +VV ETGWP  G  +E   +V NA+ +N NLI  + + +G P  P   ++TYI+ LY+ED + GP  ER++G+  P+ ++ Y + +S  S                          +CV KA   D +L   L++AC QG  +C+ IQPG  C+ PN V SHA+FA N YYQ        CDF  TA  T+++PSY  C Y
Sbjct:  251 SMEALNFSKIPVVVTETGWPSSGGSDEAAATVANAETFNTNLIKRVLNNSGPPSQPDIPINTYIYELYNEDKRSGPVSERNWGILFPNGTSVYPLSLSGGSSSAALNGSSM----------------FCVAKADADDDKLVDGLNWACGQGRANCAAIQPGQPCYLPNDVKSHASFAFNDYYQKMKSAGGTCDFDGTAITTTRDPSYRTCAY 446          
BLAST of CX671959 vs. ExPASy Swiss-Prot
Match: EA6_ARATH (Probable glucan endo-1,3-beta-glucosidase A6 OS=Arabidopsis thaliana GN=A6 PE=2 SV=1)

HSP 1 Score: 127.487 bits (319), Expect = 1.041e-28
Identity = 67/216 (31.02%), Postives = 110/216 (50.93%), Query Frame = -1
Query:  263 ALNAMGFKDVEIVVAETGWPYRGDPNEVGPSVENAKAYNGNLIAHLRSMA--GTPLMPGKSVDTYIFALYDEDLKPGPAFERSFGLFKPDLSAAYDVGISKSSQXXXXXXXXXXXXXXXXXXXXXXXAGWCVPKAGISDAQLQASLDYACSQG-IDCSPIQPGGACFEPNTVASHAAFAMNLYYQTSAKNPWNCDFSKTATLTSQNPSYNGCVYPS 901
            A+  +G+  + + ++ETGWP  GD +E G ++ NA  YN NLI  + +    GTP  PG  + T++F+L++E+ K G   +R +G+  PD S  YDV  +  +                          WCVP  G ++ +L+ +L  AC+Q    C+ + PG  C+EP ++  HA++A+N Y+         C F+  A  T+ NP  + C +PS
Sbjct:  265 AMTKLGYPHMRLAISETGWPNFGDIDETGANILNAATYNRNLIKKMSASPPIGTPSRPGLPIPTFVFSLFNENQKSGSGTQRHWGILHPDGSPIYDVDFTGQTPLTGFNPLPKPTNNVPYKGQV-----WCVPVEGANETELEETLRMACAQSNTTCAALAPGRECYEPVSIYWHASYALNSYWAQFRNQSIQCFFNGLAHETTTNPGNDRCKFPS 475          
BLAST of CX671959 vs. ExPASy Swiss-Prot
Match: E1311_ARATH (Glucan endo-1,3-beta-glucosidase 11 OS=Arabidopsis thaliana GN=At1g32860 PE=1 SV=1)

HSP 1 Score: 110.538 bits (275), Expect = 1.317e-23
Identity = 52/100 (52.00%), Postives = 70/100 (70.00%), Query Frame = -1
Query:  608 ALNAMGFKDVEIVVAETGWPYRGDPNEVGPSVENAKAYNGNLIAHLRS--MAGTPLMPGKSVDTYIFALYDEDLKPGPAFERSFGLFKPDLSAAYDVGIS 901
            AL A GFK + + ++ETGWP +GD +EVG + ENAK YNGNLI  + S     TPL P   +  Y+FAL++E+LKPGP  ER++GLFKPD + AY +G +
Sbjct:  251 ALAAAGFKSLRVEISETGWPSKGDDDEVGATPENAKRYNGNLIKMMMSGKKTKTPLKPNNDLSIYVFALFNENLKPGPTSERNYGLFKPDGTQAYSLGFA 350          
The following BLAST results are available for this feature:
BLAST of CX671959 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 47
Match NameE-valueIdentityDescription
E137_ARATH8.976e-8167.91Glucan endo-1,3-beta-glucosidase 7 OS=Arabidopsis ... [more]
E13B_WHEAT1.107e-4640.38Glucan endo-1,3-beta-glucosidase OS=Triticum aesti... [more]
E133_ARATH4.982e-3936.53Glucan endo-1,3-beta-glucosidase 3 OS=Arabidopsis ... [more]
E1312_ARATH3.230e-3836.12Glucan endo-1,3-beta-glucosidase 12 OS=Arabidopsis... [more]
E1313_ARATH4.218e-3832.81Glucan endo-1,3-beta-glucosidase 13 OS=Arabidopsis... [more]
E132_ARATH3.948e-3634.51Glucan endo-1,3-beta-glucosidase 2 OS=Arabidopsis ... [more]
E131_ARATH1.149e-3535.21Glucan endo-1,3-beta-glucosidase 1 OS=Arabidopsis ... [more]
E134_ARATH9.724e-3536.32Glucan endo-1,3-beta-glucosidase 4 OS=Arabidopsis ... [more]
EA6_ARATH1.041e-2831.02Probable glucan endo-1,3-beta-glucosidase A6 OS=Ar... [more]
E1311_ARATH1.317e-2352.00Glucan endo-1,3-beta-glucosidase 11 OS=Arabidopsis... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS10_14B06_b Madame Vinous Sweet Orange Multiple Pathogen-Infected cDNA Library UCRCS10 Citrus sinensis cDNA clone UCRCS10-14B06-C12-6.b, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX671959 ID=CX671959; Name=CX671959; organism=Citrus sinensis; type=EST; length=901bp
TTTTTTTTTTTTTTTTTATATTCAAACAGTTTATTTCAACCACTAATGTT
GTTTTCAATATAGGGTTACAAATAATTTTAATAAATAAGAAAAAAGAGAA
GAAAAGAAAGAGTTTCCTTGATACATTTTAATCAAAGGAGGAAACCTTTA
CAATTAAAGCTATATATAAAATAGGAACCATTAGATTCATCACTTTTATT
TCACTTAACATTCCATTATTCAACATCAACTGGGAATTCGTCTGGCCGTT
TCAAGTACCCCCACTAGGATAGACACATCCATTGTAACTGGGATTTTGGG
ATGTGAGAGTTGCCGTTTTTGAGAAGTCGCAGTTCCATGGATTTTTTGCA
GAAGTCTGATAGTAGAGATTCATGGCAAAAGCAGCATGTGATGCTACTGT
ATTTGGTTCGAAACAGGCACCTCCTGGCTGGATAGGACTGCAATCGATGC
CTTGGCTGCAGGCATAGTCAAGACTTGCCTGCAGTTGTGCATCGGAGATG
CCGGCCTTGGGCACACACCAACCAGCTGCTGTTGGTTTTGGTGATGGAGT
CGTTGGAGTTTTTGGAGTTGATGGAGTCACTGGAGCTGATGGAGTCTGGC
TACTCTTTGAAATACCAACATCATATGCTGCTGAAAGGTCTGGCTTGAAG
AGCCCAAATGAACGTTCAAAGGCAGGGCCAGGCTTCAAGTCCTCATCATA
GAGAGCAAAAATATATGTATCCACAGATTTTCCAGGCATCAATGGAGTTC
CAGCCATTGATCTAAGGTGAGCAATCAAGTTCCCGTTATAGGCCTTGGCA
TTCTCAACACTAGGTCCAACCTCATTCGGGTCTCCGCGGTAAGGCCACCC
TGTCTCTGCAACCACAATCTCCACATCCTTGAACCCCATTGCATTCAAGG
C
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