CX671956

Overview
NameCX671956
Unique NameCX671956
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length863
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CX671956 vs. ExPASy Swiss-Prot
Match: PP1_ORYSJ (Serine/threonine-protein phosphatase PP1 OS=Oryza sativa subsp. japonica GN=Os03g0268000 PE=2 SV=2)

HSP 1 Score: 222.631 bits (566), Expect = 2.210e-57
Identity = 101/128 (78.91%), Postives = 115/128 (89.84%), Query Frame = -3
Query:  463 P*LAQFEPDKELPRPTDVPESGLLCDLLWSDPSNDIKGWEANDRGVSYVFGADRVTEFLQKHDLELICRAHQVVEDGYEFFANRRLITIFSAPNYCGEFDNAGAMMSVDETLMCSFQILKPADKKPKF 846
            P L   +  K LPRPTDVP++GLLCDLLWSDP  D++GW  NDRGVSY FGAD+V+EFL+KHDL+LICRAHQVVEDGYEFFA+R+L+TIFSAPNYCGEFDNAGAMMSVDETLMCSFQILKPA++K KF
Sbjct:  189 PDLTHLDEIKSLPRPTDVPDTGLLCDLLWSDPGKDVQGWGMNDRGVSYTFGADKVSEFLEKHDLDLICRAHQVVEDGYEFFADRQLVTIFSAPNYCGEFDNAGAMMSVDETLMCSFQILKPAERKGKF 316          
BLAST of CX671956 vs. ExPASy Swiss-Prot
Match: PP12_TOBAC (Serine/threonine-protein phosphatase PP1 isozyme 2 OS=Nicotiana tabacum GN=NPP2 PE=2 SV=1)

HSP 1 Score: 218.779 bits (556), Expect = 3.192e-56
Identity = 96/128 (75.00%), Postives = 112/128 (87.50%), Query Frame = -3
Query:  463 P*LAQFEPDKELPRPTDVPESGLLCDLLWSDPSNDIKGWEANDRGVSYVFGADRVTEFLQKHDLELICRAHQVVEDGYEFFANRRLITIFSAPNYCGEFDNAGAMMSVDETLMCSFQILKPADKKPKF 846
            P L   +  + LPRPTD+P+SGLLCDLLWSDPS ++KGW  NDRGVSY FG+D+V EFL +HD++L+CRAHQVVEDGYEFFA R+L+TIFSAPNYCGEFDNAGAMMSVDE LMCSFQILKP D+KP+F
Sbjct:  182 PDLTDLDEIRNLPRPTDIPDSGLLCDLLWSDPSREVKGWGMNDRGVSYTFGSDKVAEFLMQHDMDLVCRAHQVVEDGYEFFAERQLVTIFSAPNYCGEFDNAGAMMSVDENLMCSFQILKPTDRKPRF 309          
BLAST of CX671956 vs. ExPASy Swiss-Prot
Match: PP11_TOBAC (Serine/threonine-protein phosphatase PP1 isozyme 1 OS=Nicotiana tabacum GN=NPP1 PE=2 SV=1)

HSP 1 Score: 218.779 bits (556), Expect = 3.192e-56
Identity = 97/128 (75.78%), Postives = 112/128 (87.50%), Query Frame = -3
Query:  463 P*LAQFEPDKELPRPTDVPESGLLCDLLWSDPSNDIKGWEANDRGVSYVFGADRVTEFLQKHDLELICRAHQVVEDGYEFFANRRLITIFSAPNYCGEFDNAGAMMSVDETLMCSFQILKPADKKPKF 846
            P L   +  + LPRPTDVP+SGLLCDLLWSDPS ++KGW  NDRGVSY FG D+V EFL +HD++L+CRAHQVVEDGYEFFA R+L+TIFSAPNYCGEFDNAGAMMSVDE+LMCSFQILKP D+KP+F
Sbjct:  189 PVLTNLDQIRNLPRPTDVPDSGLLCDLLWSDPSREVKGWGMNDRGVSYTFGPDKVAEFLMQHDMDLVCRAHQVVEDGYEFFAERQLVTIFSAPNYCGEFDNAGAMMSVDESLMCSFQILKPTDRKPRF 316          
BLAST of CX671956 vs. ExPASy Swiss-Prot
Match: PP12_ARATH (Serine/threonine-protein phosphatase PP1 isozyme 2 OS=Arabidopsis thaliana GN=TOPP2 PE=2 SV=1)

HSP 1 Score: 218.394 bits (555), Expect = 4.169e-56
Identity = 100/128 (78.12%), Postives = 113/128 (88.28%), Query Frame = -3
Query:  463 P*LAQFEPDKELPRPTDVPESGLLCDLLWSDPSNDIKGWEANDRGVSYVFGADRVTEFLQKHDLELICRAHQVVEDGYEFFANRRLITIFSAPNYCGEFDNAGAMMSVDETLMCSFQILKPADKKPKF 846
            P L   E  K + RPTDVP+SGLLCDLLWSDPS D+KGW  NDRGVSY FG D+V EFL K+D++LICRAHQVVEDGYEFFA+R+L+TIFSAPNYCGEFDNAGAMMSVDE+LMCSFQILKPAD+KP+F
Sbjct:  184 PDLTNVEQIKNIKRPTDVPDSGLLCDLLWSDPSKDVKGWGMNDRGVSYTFGPDKVAEFLIKNDMDLICRAHQVVEDGYEFFADRQLVTIFSAPNYCGEFDNAGAMMSVDESLMCSFQILKPADRKPRF 311          
BLAST of CX671956 vs. ExPASy Swiss-Prot
Match: PP11_ACECL (Serine/threonine-protein phosphatase PP1 isozyme 1 OS=Acetabularia cliftonii PE=3 SV=1)

HSP 1 Score: 217.238 bits (552), Expect = 9.287e-56
Identity = 97/139 (69.78%), Postives = 116/139 (83.45%), Query Frame = -3
Query:  430 P*LAQFEPDKELPRPTDVPESGLLCDLLWSDPSNDIKGWEANDRGVSYVFGADRVTEFLQKHDLELICRAHQVVEDGYEFFANRRLITIFSAPNYCGEFDNAGAMMSVDETLMCSFQILKPADKKPKFSFGSTTTVKSG 846
            P L   E  + +PRPTDVP++GLLCDLLW+DP  D++GW  NDRGVSY FG D VTEFLQ+HDL+L+CRAHQVVEDGYEFFA R+L+T+FSAPNYCGEFDNAGA+MSVD+TLMCSFQILKP++KK KF  G  +   +G
Sbjct:  175 PELKTLEQIRRIPRPTDVPDTGLLCDLLWADPDKDVQGWGENDRGVSYTFGPDTVTEFLQRHDLDLVCRAHQVVEDGYEFFAKRQLVTLFSAPNYCGEFDNAGALMSVDDTLMCSFQILKPSEKKGKFMQGGNSLAGAG 313          
BLAST of CX671956 vs. ExPASy Swiss-Prot
Match: PP13_ARATH (Serine/threonine-protein phosphatase PP1 isozyme 3 OS=Arabidopsis thaliana GN=TOPP3 PE=2 SV=1)

HSP 1 Score: 215.312 bits (547), Expect = 3.529e-55
Identity = 99/144 (68.75%), Postives = 115/144 (79.86%), Query Frame = -3
Query:  415 P*LAQFEPDKELPRPTDVPESGLLCDLLWSDPSNDIKGWEANDRGVSYVFGADRVTEFLQKHDLELICRAHQVVEDGYEFFANRRLITIFSAPNYCGEFDNAGAMMSVDETLMCSFQILKPADKKPKFSFGSTTTVKSGAPPSR 846
            P L   +  + +PRP D+P+ GLLCDLLWSDP  DI+GW  NDRGVSY FGAD+V EFLQ HDL+LICRAHQVVEDGYEFFANR+L+TIFSAPNYCGEFDNAGAMMSVD++L CSFQILK ++KK  F FG     + G PP +
Sbjct:  175 PELKHLDEIRNIPRPADIPDHGLLCDLLWSDPDKDIEGWGENDRGVSYTFGADKVEEFLQTHDLDLICRAHQVVEDGYEFFANRQLVTIFSAPNYCGEFDNAGAMMSVDDSLTCSFQILKASEKKGNFGFGKNAG-RRGTPPRK 317          
BLAST of CX671956 vs. ExPASy Swiss-Prot
Match: PP12_ACECL (Serine/threonine-protein phosphatase PP1 isozyme 2 OS=Acetabularia cliftonii PE=3 SV=1)

HSP 1 Score: 214.927 bits (546), Expect = 4.609e-55
Identity = 97/132 (73.48%), Postives = 112/132 (84.85%), Query Frame = -3
Query:  451 P*LAQFEPDKELPRPTDVPESGLLCDLLWSDPSNDIKGWEANDRGVSYVFGADRVTEFLQKHDLELICRAHQVVEDGYEFFANRRLITIFSAPNYCGEFDNAGAMMSVDETLMCSFQILKPADKKPKFSFGS 846
            P L   +  + +PRPTDVP++GLLCDLLWSDP  D+ GW  NDRGVSY FG D VT FLQKHDL+LICRAHQVVEDGYEFFA R+L+T+FSAPNYCGEFDNAGA+MSVD+TLMCSFQILKP++KK K  +GS
Sbjct:  175 PELKSLDAIRHIPRPTDVPDTGLLCDLLWSDPDKDVAGWGENDRGVSYTFGPDTVTGFLQKHDLDLICRAHQVVEDGYEFFAKRQLVTLFSAPNYCGEFDNAGALMSVDDTLMCSFQILKPSEKKGKLLYGS 306          
BLAST of CX671956 vs. ExPASy Swiss-Prot
Match: PP1B_XENTR (Serine/threonine-protein phosphatase PP1-beta catalytic subunit OS=Xenopus tropicalis GN=ppp1cb PE=2 SV=1)

HSP 1 Score: 214.542 bits (545), Expect = 6.020e-55
Identity = 96/142 (67.61%), Postives = 116/142 (81.69%), Query Frame = -3
Query:  421 P*LAQFEPDKELPRPTDVPESGLLCDLLWSDPSNDIKGWEANDRGVSYVFGADRVTEFLQKHDLELICRAHQVVEDGYEFFANRRLITIFSAPNYCGEFDNAGAMMSVDETLMCSFQILKPADKKPKFSFGSTTTVKSGAPP 846
            P L   E  + + RPTDVP++GLLCDLLWSDP  D++GW  NDRGVS+ FGAD V++FL +HDL+LICRAHQVVEDGYEFFA R+L+T+FSAPNYCGEFDNAG MMSVDETLMCSFQILKP++KK K+ +G   + +   PP
Sbjct:  177 PDLQSMEQIRRIMRPTDVPDTGLLCDLLWSDPDKDVQGWGENDRGVSFTFGADVVSKFLNRHDLDLICRAHQVVEDGYEFFAKRQLVTLFSAPNYCGEFDNAGGMMSVDETLMCSFQILKPSEKKAKYQYGGLNSGRPVTPP 318          
BLAST of CX671956 vs. ExPASy Swiss-Prot
Match: PP1B_XENLA (Serine/threonine-protein phosphatase PP1-beta catalytic subunit OS=Xenopus laevis GN=ppp1cb PE=2 SV=1)

HSP 1 Score: 214.542 bits (545), Expect = 6.020e-55
Identity = 96/142 (67.61%), Postives = 116/142 (81.69%), Query Frame = -3
Query:  421 P*LAQFEPDKELPRPTDVPESGLLCDLLWSDPSNDIKGWEANDRGVSYVFGADRVTEFLQKHDLELICRAHQVVEDGYEFFANRRLITIFSAPNYCGEFDNAGAMMSVDETLMCSFQILKPADKKPKFSFGSTTTVKSGAPP 846
            P L   E  + + RPTDVP++GLLCDLLWSDP  D++GW  NDRGVS+ FGAD V++FL +HDL+LICRAHQVVEDGYEFFA R+L+T+FSAPNYCGEFDNAG MMSVDETLMCSFQILKP++KK K+ +G   + +   PP
Sbjct:  177 PDLQSMEQIRRIMRPTDVPDTGLLCDLLWSDPDKDVQGWGENDRGVSFTFGADVVSKFLNRHDLDLICRAHQVVEDGYEFFAKRQLVTLFSAPNYCGEFDNAGGMMSVDETLMCSFQILKPSEKKAKYQYGGLNSGRPVTPP 318          
BLAST of CX671956 vs. ExPASy Swiss-Prot
Match: PP1B_RAT (Serine/threonine-protein phosphatase PP1-beta catalytic subunit OS=Rattus norvegicus GN=Ppp1cb PE=1 SV=3)

HSP 1 Score: 214.542 bits (545), Expect = 6.020e-55
Identity = 96/142 (67.61%), Postives = 116/142 (81.69%), Query Frame = -3
Query:  421 P*LAQFEPDKELPRPTDVPESGLLCDLLWSDPSNDIKGWEANDRGVSYVFGADRVTEFLQKHDLELICRAHQVVEDGYEFFANRRLITIFSAPNYCGEFDNAGAMMSVDETLMCSFQILKPADKKPKFSFGSTTTVKSGAPP 846
            P L   E  + + RPTDVP++GLLCDLLWSDP  D++GW  NDRGVS+ FGAD V++FL +HDL+LICRAHQVVEDGYEFFA R+L+T+FSAPNYCGEFDNAG MMSVDETLMCSFQILKP++KK K+ +G   + +   PP
Sbjct:  177 PDLQSMEQIRRIMRPTDVPDTGLLCDLLWSDPDKDVQGWGENDRGVSFTFGADVVSKFLNRHDLDLICRAHQVVEDGYEFFAKRQLVTLFSAPNYCGEFDNAGGMMSVDETLMCSFQILKPSEKKAKYQYGGLNSGRPVTPP 318          
The following BLAST results are available for this feature:
BLAST of CX671956 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 191
Match NameE-valueIdentityDescription
PP1_ORYSJ2.210e-5778.91Serine/threonine-protein phosphatase PP1 OS=Oryza ... [more]
PP12_TOBAC3.192e-5675.00Serine/threonine-protein phosphatase PP1 isozyme 2... [more]
PP11_TOBAC3.192e-5675.78Serine/threonine-protein phosphatase PP1 isozyme 1... [more]
PP12_ARATH4.169e-5678.13Serine/threonine-protein phosphatase PP1 isozyme 2... [more]
PP11_ACECL9.287e-5669.78Serine/threonine-protein phosphatase PP1 isozyme 1... [more]
PP13_ARATH3.529e-5568.75Serine/threonine-protein phosphatase PP1 isozyme 3... [more]
PP12_ACECL4.609e-5573.48Serine/threonine-protein phosphatase PP1 isozyme 2... [more]
PP1B_XENTR6.020e-5567.61Serine/threonine-protein phosphatase PP1-beta cata... [more]
PP1B_XENLA6.020e-5567.61Serine/threonine-protein phosphatase PP1-beta cata... [more]
PP1B_RAT6.020e-5567.61Serine/threonine-protein phosphatase PP1-beta cata... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS10_14B04_g Madame Vinous Sweet Orange Multiple Pathogen-Infected cDNA Library UCRCS10 Citrus sinensis cDNA clone UCRCS10-14B04-C8-5.g, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX671956 ID=CX671956; Name=CX671956; organism=Citrus sinensis; type=EST; length=863bp
ACAACACATTCATCCCCATTATGATTACATAATACATACACCCCTGTGAA
TTTTTTCATGCTGTGATTATGATACAATACGGCTTCTAAGGAAGAAGCTG
AACAGAGAGGAGTCACGAGAGGCCACAACTTACAGCTTGTGTAGCACTCA
TAATGTACAGAGGGTGAGCAAAACAAAAAAAGATTACATCTTCCGAAAAA
ATTTTCTGGAGGAACATCCTTTATCCTCTGCTGCTCAACAAGGTTGACAA
CACCAACGGTTTGCCTCGTTGGGACATACTCTTGGAACCCAGATTTGTTA
GATTGCTATTTCTCACGATGTTCTATACATCCTTGATCTAATACAGCTAC
TTTCTTCAGAAAGCTCCATTTTAGATCAAGCTTATTAAACCTTTGCACCA
AGAAACGACTTCATTCTACTTGGAGGAGCACCTGACTTAACTGTAGTCGT
GCTCCCAAAACTGAACTTTGGCTTCTTATCTGCAGGCTTTAATATCTGAA
AAGAACACATTAGTGTCTCATCCACGCTCATCATTGCACCAGCATTGTCA
AACTCTCCACAGTAATTAGGTGCTGAAAATATAGTTATGAGCCGTCTATT
AGCAAAAAATTCATATCCATCTTCCACAACCTGGTGGGCCCGACAAATTA
ACTCGAGATCGTGCTTCTGAAGAAACTCTGTCACTCTATCAGCACCAAAG
ACATATGAAACTCCTCTATCATTTGCTTCCCAACCTTTAATGTCGTTACT
GGGATCCGACCATAGGAGATCGCAGAGCAAACCACTTTCTGGGACATCAG
TAGGTCGAGGTAACTCCTTATCTGGTTCAAATTGTGCAAGTCAGGGGAAA
GTCCACCATGCAT
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