CX671951

Overview
NameCX671951
Unique NameCX671951
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length865
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CX671951 vs. ExPASy Swiss-Prot
Match: UTP15_BOVIN (U3 small nucleolar RNA-associated protein 15 homolog OS=Bos taurus GN=UTP15 PE=2 SV=1)

HSP 1 Score: 199.134 bits (505), Expect = 2.632e-50
Identity = 97/240 (40.42%), Postives = 148/240 (61.67%), Query Frame = 2
Query:  149 TPESKYWSSFK-PHQIPGLVSSINSIVFSPTTSHLFAATHSASLTLFSSQTLEKHSAISSFKDVVTCSSFRPXXXXXXXXXXXXXIQVFDVKSRTPLRRLKSHTRPVRFVKYPFLDKLHLVSGGDDGIVKFWDVAGESVVLDLFGHKDYVRCGDCSPVNGDMFVTGSYDHTVKLWDVRVENSKSVMEVNHGKPIEDVMFLPSGGLIATAGGNSVKIWDLIGGGKMV*SMESHNKTVTSVC 865
            T ++ YW+++K P QI     +++ + FSP   + +A T S+ + ++   + E     S FKD   C++FR              +Q+FD+  R PLR+ + HT+ V  V +   DK H+VSG DD  VK WD+     +L    H DYVRCG  S +N D+FVTGSYDHTVK++D R   ++SV+ V HG+P+E V+  PSGGL+ +AGG  VK+WD++ GG+++ S+++H+KTVT +C
Sbjct:   20 TQDTLYWNNYKTPVQIKEF-GAVSKVDFSPQPPYNYAVTASSRIHIYGRYSQEPIKTFSRFKDTAYCATFRQDGRLLVAGSEDGGVQLFDISGRAPLRQFEGHTKAVHSVDFT-ADKYHVVSGADDYTVKLWDIPNSKEILTFKEHSDYVRCGCASKLNTDLFVTGSYDHTVKMFDAR--TNQSVISVEHGQPVESVLLFPSGGLLVSAGGRYVKVWDMLKGGQLLVSLKNHHKTVTCLC 255          
BLAST of CX671951 vs. ExPASy Swiss-Prot
Match: UTP15_RAT (U3 small nucleolar RNA-associated protein 15 homolog OS=Rattus norvegicus GN=Utp15 PE=2 SV=1)

HSP 1 Score: 198.364 bits (503), Expect = 4.490e-50
Identity = 97/240 (40.42%), Postives = 148/240 (61.67%), Query Frame = 2
Query:  149 TPESKYWSSFK-PHQIPGLVSSINSIVFSPTTSHLFAATHSASLTLFSSQTLEKHSAISSFKDVVTCSSFRPXXXXXXXXXXXXXIQVFDVKSRTPLRRLKSHTRPVRFVKYPFLDKLHLVSGGDDGIVKFWDVAGESVVLDLFGHKDYVRCGDCSPVNGDMFVTGSYDHTVKLWDVRVENSKSVMEVNHGKPIEDVMFLPSGGLIATAGGNSVKIWDLIGGGKMV*SMESHNKTVTSVC 865
            T ++ YW+++K P QI     +++ + FSP   + +A T S+ + ++   + E     S FKD   C++FR              +Q+FD+  R PLR+ + HT+ V  V +   DK H+VSG DD  VK WD+     +L    H DYVRCG  S +N D+FVTGSYDHTVK++D R   +K+V+ V HG+P+E V+  PSGGL+ +AGG  VK+WD++ GG+++ S+++H+KTVT +C
Sbjct:   20 TQDTLYWNNYKTPVQIKEF-GAVSKVDFSPQPPYNYAVTASSRIHIYGRYSQEPVKTFSRFKDTAYCATFRQDGQLLVAGSEDGVVQLFDISGRAPLRQFEGHTKAVHTVDFT-ADKYHVVSGADDYTVKLWDIPNSKEILTFKEHSDYVRCGCASKLNPDLFVTGSYDHTVKMFDAR--TNKNVLCVEHGQPVESVLLFPSGGLLVSAGGRYVKVWDMLKGGQLLVSLKNHHKTVTCLC 255          
BLAST of CX671951 vs. ExPASy Swiss-Prot
Match: UTP15_HUMAN (U3 small nucleolar RNA-associated protein 15 homolog OS=Homo sapiens GN=UTP15 PE=1 SV=2)

HSP 1 Score: 198.364 bits (503), Expect = 4.490e-50
Identity = 97/240 (40.42%), Postives = 147/240 (61.25%), Query Frame = 2
Query:  149 TPESKYWSSFK-PHQIPGLVSSINSIVFSPTTSHLFAATHSASLTLFSSQTLEKHSAISSFKDVVTCSSFRPXXXXXXXXXXXXXIQVFDVKSRTPLRRLKSHTRPVRFVKYPFLDKLHLVSGGDDGIVKFWDVAGESVVLDLFGHKDYVRCGDCSPVNGDMFVTGSYDHTVKLWDVRVENSKSVMEVNHGKPIEDVMFLPSGGLIATAGGNSVKIWDLIGGGKMV*SMESHNKTVTSVC 865
            T ++ YW+++K P QI     +++ + FSP   + +A T S+ + ++   + E     S FKD   C++FR              +Q+FD+  R PLR+ + HT+ V  V     DK H+VSG DD  VK WD+     +L    H DYVRCG  S +N D+F+TGSYDHTVK++D R   S+SV+ V HG+P+E V+  PSGGL+ +AGG  VK+WD++ GG+++ S+++H+KTVT +C
Sbjct:   20 TQDTLYWNNYKTPVQIKEF-GAVSKVDFSPQPPYNYAVTASSRIHIYGRYSQEPIKTFSRFKDTAYCATFRQDGRLLVAGSEDGGVQLFDISGRAPLRQFEGHTKAVHTVDST-ADKYHVVSGADDYTVKLWDIPNSKEILTFKEHSDYVRCGCASKLNPDLFITGSYDHTVKMFDAR--TSESVLSVEHGQPVESVLLFPSGGLLVSAGGRYVKVWDMLKGGQLLVSLKNHHKTVTCLC 255          
BLAST of CX671951 vs. ExPASy Swiss-Prot
Match: UTP15_MOUSE (U3 small nucleolar RNA-associated protein 15 homolog OS=Mus musculus GN=Utp15 PE=2 SV=1)

HSP 1 Score: 196.438 bits (498), Expect = 1.706e-49
Identity = 96/240 (40.00%), Postives = 147/240 (61.25%), Query Frame = 2
Query:  149 TPESKYWSSFK-PHQIPGLVSSINSIVFSPTTSHLFAATHSASLTLFSSQTLEKHSAISSFKDVVTCSSFRPXXXXXXXXXXXXXIQVFDVKSRTPLRRLKSHTRPVRFVKYPFLDKLHLVSGGDDGIVKFWDVAGESVVLDLFGHKDYVRCGDCSPVNGDMFVTGSYDHTVKLWDVRVENSKSVMEVNHGKPIEDVMFLPSGGLIATAGGNSVKIWDLIGGGKMV*SMESHNKTVTSVC 865
            T ++ YW+++K P QI     +++ + FSP   + +A T S+ + ++   + E     S FKD   C++FR              +Q+FD+  R PLR+ + HT+ V  V +   D  H+VSG DD  VK WD+     +L    H DYVRCG  S +N D+FVTGSYDHTVK++D R   +K+V+ V HG+P+E V+  PSGGL+ +AGG  VK+WD++ GG+++ S+++H+KTVT +C
Sbjct:   20 TQDTLYWNNYKTPVQIKEF-GAVSKVDFSPQLPYNYAVTASSRIHIYGRYSQEPVKTFSRFKDTAYCATFRQDGQLLVAGSEDGVVQLFDINGRAPLRQFEGHTKAVHTVDFT-ADNYHVVSGADDYTVKLWDIPNSKEILTFKEHSDYVRCGCASKLNPDLFVTGSYDHTVKIFDAR--TNKNVLCVEHGQPVESVLLFPSGGLLVSAGGRYVKVWDMLKGGQLLVSLKNHHKTVTCLC 255          
BLAST of CX671951 vs. ExPASy Swiss-Prot
Match: UTP15_PONAB (U3 small nucleolar RNA-associated protein 15 homolog OS=Pongo abelii GN=UTP15 PE=2 SV=1)

HSP 1 Score: 196.052 bits (497), Expect = 2.229e-49
Identity = 97/240 (40.42%), Postives = 147/240 (61.25%), Query Frame = 2
Query:  149 TPESKYWSSFK-PHQIPGLVSSINSIVFSPTTSHLFAATHSASLTLFSSQTLEKHSAISSFKDVVTCSSFRPXXXXXXXXXXXXXIQVFDVKSRTPLRRLKSHTRPVRFVKYPFLDKLHLVSGGDDGIVKFWDVAGESVVLDLFGHKDYVRCGDCSPVNGDMFVTGSYDHTVKLWDVRVENSKSVMEVNHGKPIEDVMFLPSGGLIATAGGNSVKIWDLIGGGKMV*SMESHNKTVTSVC 865
            T ++ YW+++K P QI     +++ + FSP   + +A T S+ + ++   + E     S FKD   C++FR              +Q+FD+  R PLR+ + HT+ V  V +   DK H+VSG DD  VK WD+     VL    H DYVRCG  S +N D+F+TGSYDHTVK++D R   S+SV+ V HG+P+E V+  PSGGL+ +AGG  VK+ D++ GG+++ S+++H+KTVT +C
Sbjct:   20 TQDTLYWNNYKTPVQIKEF-GAVSKVDFSPQPPYNYAVTASSRIHIYGRYSQESIKTFSRFKDTAYCATFRQDGRLIVAGSEDGGVQLFDISGRAPLRQFEGHTKAVHTVDFT-ADKYHVVSGADDYTVKLWDIPNSKEVLTFKEHSDYVRCGCASKLNPDLFITGSYDHTVKMFDAR--TSESVLSVEHGQPVESVLLFPSGGLLVSAGGRYVKVCDMLKGGQLLVSLKNHHKTVTCLC 255          
BLAST of CX671951 vs. ExPASy Swiss-Prot
Match: UTP15_CHICK (U3 small nucleolar RNA-associated protein 15 homolog OS=Gallus gallus GN=UTP15 PE=2 SV=1)

HSP 1 Score: 192.971 bits (489), Expect = 1.887e-48
Identity = 100/255 (39.22%), Postives = 148/255 (58.04%), Query Frame = 2
Query:  104 PVKPKLKPKPRNLSQTPESKYWSSFK-PHQIPGLVSSINSIVFSPTTSHLFAATHSASLTLFSSQTLEKHSAISSFKDVVTCSSFRPXXXXXXXXXXXXXIQVFDVKSRTPLRRLKSHTRPVRFVKYPFLDKLHLVSGGDDGIVKFWDVAGESVVLDLFGHKDYVRCGDCSPVNGDMFVTGSYDHTVKLWDVRVENSKSVMEVNHGKPIEDVMFLPSGGLIATAGGNSVKIWDLIGGGKMV*SMESHNKTVTSVC 865
            P  PKL  K      T ++ YW  +K P QI     +IN I FSP   + +A T S+ + ++   + E     S FKD   C+++R              I++FD+  R PLR+   HT+ V  V +   DK  + SGGDD     WD+   + ++    H DYVRCG  S +NGD+F+TGSYDHTVK++D R ++  SVM + HG P+E V+  PSGGL+ +AGG  VK+WD++ GG+++ S+++H+KTVT +C
Sbjct:   10 PAVPKLGEKI-----TQDTLYWRGYKTPVQIKEF-GAINKIDFSPVPPYNYAVTASSRVHIYGRYSQEPIKTFSRFKDAAYCATYRDDGKLLVAGSEEGSIRLFDISGRAPLRQFDGHTKAVHVVGF-LSDKYRIFSGGDDYSSSLWDIPSATEIVSYSEHSDYVRCGCASKLNGDVFITGSYDHTVKVFDARTKS--SVMTIEHGHPVESVLLFPSGGLLVSAGGRYVKVWDVLKGGQLLVSLKNHHKTVTCLC 255          
BLAST of CX671951 vs. ExPASy Swiss-Prot
Match: UTP15_XENTR (U3 small nucleolar RNA-associated protein 15 homolog OS=Xenopus tropicalis GN=utp15 PE=2 SV=1)

HSP 1 Score: 187.193 bits (474), Expect = 1.035e-46
Identity = 97/255 (38.04%), Postives = 143/255 (56.08%), Query Frame = 2
Query:  104 PVKPKLKPKPRNLSQTPESKYWSSFK-PHQIPGLVSSINSIVFSPTTSHLFAATHSASLTLFSSQTLEKHSAISSFKDVVTCSSFRPXXXXXXXXXXXXXIQVFDVKSRTPLRRLKSHTRPVRFVKYPFLDKLHLVSGGDDGIVKFWDVAGESVVLDLFGHKDYVRCGDCSPVNGDMFVTGSYDHTVKLWDVRVENSKSVMEVNHGKPIEDVMFLPSGGLIATAGGNSVKIWDLIGGGKMV*SMESHNKTVTSVC 865
            P  PKL  K      T ++ YW  +K P QI     ++  I FSP     +A T S  + L+   + E     S FKD   C +FR              +Q+FD+  +  LR+   H++ V FV +   DK  +VSG DD   + WD+     +     H DY+RCG  S +N D+F TGSYDHT+K++D R +  KSVM ++HG+P+E V+  PSGGL+ +AGG  VK+WD++ GG+++ S+ +H+KTVTS+C
Sbjct:   10 PTYPKLGEKI-----TQDTLYWKRYKTPVQIKEF-GAVTKIHFSPVQPCTYAVTSSTRIHLYGQYSQEPIKTFSRFKDTAYCGTFRGDGKLLAAGCEDSVVQLFDISGKAALRQFSGHSKAVHFVDFT-ADKYRIVSGSDDYTSRLWDIPNGVEITSYNEHTDYIRCGCTSALNNDLFATGSYDHTIKIFDGRTD--KSVMSMDHGQPVESVLLFPSGGLLVSAGGRYVKVWDILKGGQLLVSLRNHHKTVTSLC 255          
BLAST of CX671951 vs. ExPASy Swiss-Prot
Match: UTP15_XENLA (U3 small nucleolar RNA-associated protein 15 homolog OS=Xenopus laevis GN=utp15 PE=2 SV=1)

HSP 1 Score: 184.496 bits (467), Expect = 6.710e-46
Identity = 96/255 (37.65%), Postives = 142/255 (55.69%), Query Frame = 2
Query:  104 PVKPKLKPKPRNLSQTPESKYWSSFK-PHQIPGLVSSINSIVFSPTTSHLFAATHSASLTLFSSQTLEKHSAISSFKDVVTCSSFRPXXXXXXXXXXXXXIQVFDVKSRTPLRRLKSHTRPVRFVKYPFLDKLHLVSGGDDGIVKFWDVAGESVVLDLFGHKDYVRCGDCSPVNGDMFVTGSYDHTVKLWDVRVENSKSVMEVNHGKPIEDVMFLPSGGLIATAGGNSVKIWDLIGGGKMV*SMESHNKTVTSVC 865
            P  PKL  K      T ++ YW  +K P QI     ++  I FSP     +A T S  + L+   + E     S FKD   C ++R              +Q+FD+  +  LR+   H++ V FV +   DK  +VSG DD   K WD+     +     H DY+RCG  S +N D+F TGSYDHT+K++D R +  KSVM ++HG+P+E V+  PSGGL+ +AGG  VK+WD++ GG+++ S+ +H+KTVT +C
Sbjct:   10 PTYPKLGEKI-----TQDTLYWKRYKTPVQIKEF-GAVTKIHFSPIQPFSYAVTSSTRIHLYGQYSQEPVKTFSRFKDTAYCGTYRGDGKLLAAGCEDSVVQLFDISGKAALRQFSGHSKAVHFVDFTS-DKYRIVSGSDDYTSKLWDIPNGIEIASYKEHTDYIRCGCTSSLNNDLFATGSYDHTIKVFDGRTD--KSVMSMDHGQPVESVLLFPSGGLLVSAGGRYVKVWDILKGGQLLVSLRNHHKTVTCLC 255          
BLAST of CX671951 vs. ExPASy Swiss-Prot
Match: UTP15_DANRE (U3 small nucleolar RNA-associated protein 15 homolog OS=Danio rerio GN=utp15 PE=2 SV=1)

HSP 1 Score: 161.384 bits (407), Expect = 6.083e-39
Identity = 87/239 (36.40%), Postives = 130/239 (54.39%), Query Frame = 2
Query:  149 TPESKYWSSFKPHQIPGLVSSINSIVFSPTTSHLFAATHSASLTLFSSQTLEKHSAISSFKDVVTCSSFRPXXXXXXXXXXXXXIQVFDVKSRTPLRRLKSHTRPVRFVKYPFLDKLHLVSGGDDGIVKFWDVAGESVVLDLFGHKDYVRCGDCSPVNGDMFVTGSYDHTVKLWDVRVENSKSVMEVNHGKPIEDVMFLPSGGLIATAGGNSVKIWDLIGGGKMV*SMESHNKTVTSVC 865
            T E+ YW ++KP        +++ I FSP   H +A T S  + ++   + E     + F D     SFR              I++FD+  R  LR+ K H++ V    +   D   ++SG DD   + WDVA    +  +  H DY+R    S +N D+FVTGSYDHTVK++DVR  NS  VM + HG+P+E V+  PS  L+ + GG  VK+WDL+ GG+ + S+++H+KTVT  C
Sbjct:   20 TEETLYWKNYKPPVQIKEFGAVSKIDFSPLPPHNYAVTASTRVHIYGLHSQEPIRNFTRFHDTAYGGSFRGDGKLLVAGSEEGLIRLFDIGGRVSLRQFKGHSKAVHATSF-LSDGFRVLSGSDDLTCRVWDVASAVELSSITEHTDYIRAIAPSKLNPDVFVTGSYDHTVKMFDVRSGNS--VMTMQHGQPVECVLLYPSEALLVSTGGRYVKVWDLLKGGQQLVSLKNHHKTVTCAC 255          
BLAST of CX671951 vs. ExPASy Swiss-Prot
Match: UTP15_SCHPO (U3 small nucleolar RNA-associated protein 15 OS=Schizosaccharomyces pombe GN=utp15 PE=2 SV=1)

HSP 1 Score: 142.895 bits (359), Expect = 2.239e-33
Identity = 79/237 (33.33%), Postives = 128/237 (54.01%), Query Frame = 2
Query:  149 TPESKYWSSFKPHQIPGLVSSINSIVFSPTTSHLFAATHSASLTLFSSQTLEKHSAISSFKDVVTCSSFRPXXXXXXXXXXXXXIQVFDVKSRTPLRRLKSHTRPVRFVKYPFLDKLHLVSGGDDGIVKFWDVAGESVVLDLFGHKDYVRCGDCSPVNGDMFVTGSYDHTVKLWDVRVENSKSVMEVNHGKPIEDVMFLPSGGLIATAGGNSVKIWDLIGGGKM-V*SMESHNKTVT 856
            T E+K+W SFK   +    S+I SI FS  + + FA T  A + ++ + +      I+ FKD     + R              +Q+FD+ +R+ LR L +H  PV   ++        +SG DD  VK WD++  +V  DL GH+DYVR    S ++    V+G YD T++LWD R+ + + VM  +HG+ I+ V+ + SG  + +AGG S+K+WDL+ G +     + +H K++T
Sbjct:   21 TAENKFWRSFKVPVVAKEYSAITSIHFSAESPYDFAVTSGARVQIYGASSRSVKKTIARFKDTAYSGNIRKDGKLLLAGDATGLVQIFDLSTRSILRALDAHQFPVHVTQFCPYANTTFLSGSDDKTVKVWDLSTGAVQYDLSGHEDYVR--TASWMSATRLVSGGYDGTIRLWDTRIADPE-VMSFSHGEAIDVVLPMQSGSTVISAGGPSIKVWDLVAGRQTPTKKLSNHQKSIT 254          
The following BLAST results are available for this feature:
BLAST of CX671951 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 49
Match NameE-valueIdentityDescription
UTP15_BOVIN2.632e-5040.42U3 small nucleolar RNA-associated protein 15 homol... [more]
UTP15_RAT4.490e-5040.42U3 small nucleolar RNA-associated protein 15 homol... [more]
UTP15_HUMAN4.490e-5040.42U3 small nucleolar RNA-associated protein 15 homol... [more]
UTP15_MOUSE1.706e-4940.00U3 small nucleolar RNA-associated protein 15 homol... [more]
UTP15_PONAB2.229e-4940.42U3 small nucleolar RNA-associated protein 15 homol... [more]
UTP15_CHICK1.887e-4839.22U3 small nucleolar RNA-associated protein 15 homol... [more]
UTP15_XENTR1.035e-4638.04U3 small nucleolar RNA-associated protein 15 homol... [more]
UTP15_XENLA6.710e-4637.65U3 small nucleolar RNA-associated protein 15 homol... [more]
UTP15_DANRE6.083e-3936.40U3 small nucleolar RNA-associated protein 15 homol... [more]
UTP15_SCHPO2.239e-3333.33U3 small nucleolar RNA-associated protein 15 OS=Sc... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS10_14B02_b Madame Vinous Sweet Orange Multiple Pathogen-Infected cDNA Library UCRCS10 Citrus sinensis cDNA clone UCRCS10-14B02-C4-6.b, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX671951 ID=CX671951; Name=CX671951; organism=Citrus sinensis; type=EST; length=865bp
CTTTATCGGAAACCAAAACCCTAAACCTCACTTACCATAACCACCTTCAA
CAATGGCGATAGCAAACGACAGCCAACAACCAACAACAGTATCCAAAAAC
TTCCCAGTAAAACCCAAGCTAAAACCAAAACCCAGAAACCTTTCACAAAC
CCCAGAATCCAAGTACTGGTCCTCGTTTAAACCCCACCAAATCCCCGGTC
TCGTCTCGTCAATCAATTCAATCGTATTCTCTCCGACTACATCTCACCTC
TTCGCTGCTACCCACTCAGCCTCTCTCACTCTTTTCAGCTCACAAACTCT
CGAGAAACACTCCGCTATCTCCTCCTTCAAAGACGTCGTTACCTGCTCTT
CGTTCCGCCCCGACGGGTCCCTCCTTGCCGCCTCTGATCTCTCAGGTCTC
ATCCAAGTCTTCGACGTCAAATCGCGGACCCCACTTCGTCGTTTGAAGTC
TCACACCCGGCCGGTGCGTTTCGTTAAGTACCCATTTCTTGATAAGTTAC
ATTTAGTGTCTGGTGGTGATGATGGTATTGTTAAGTTTTGGGATGTTGCT
GGGGAGAGCGTGGTTTTGGATTTGTTTGGACACAAGGATTACGTTAGATG
TGGGGATTGCTCTCCTGTTAATGGGGATATGTTTGTTACTGGATCTTATG
ACCACACTGTGAAGTTGTGGGATGTGAGAGTTGAGAATTCAAAGTCGGTG
ATGGAAGTTAATCATGGGAAACCGATTGAGGACGTTATGTTTTTGCCATC
GGGTGGATTGATTGCAACAGCCGGTGGGAATAGTGTGAAGATTTGGGATT
TGATTGGAGGAGGGAAGATGGTGTAGTCAATGGAGAGTCATAATAAGACT
GTCACATCCGTCTGT
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