CX671949

Overview
NameCX671949
Unique NameCX671949
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length904
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig1234 contig Csv1_Contig1234:861..1764. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
[Close]
BLAST of CX671949 vs. ExPASy Swiss-Prot
Match: METK_MEDTR (S-adenosylmethionine synthetase OS=Medicago truncatula GN=METK PE=3 SV=1)

HSP 1 Score: 346.28 bits (887), Expect = 1.426e-94
Identity = 170/188 (90.43%), Postives = 175/188 (93.09%), Query Frame = -3 
Query:  339 IAADLKEHVIKPVIPEKYLDEKTIFHLNPSGRFVIGGPHGDAGLTGRKIIIDTYXXXXXXXXXXXXGKDPTKVDRSGAYIVRQAAKSIVANGLARRCIVQVSYAIGVPEPLSVFVDSYGTGKIPDKEILKIVKESFDFRPGMMTINLDLKRGGNGRFLKTAAYGHFGRDDPDFTWEVVKPLKWEKPQA 902
            IAADLKEHVIKPVIPEKYLDEKTIFHLNPSGRFVIGGPHGDAGLTGRKIIIDTY            GKDPTKVDRSGAY+VRQAAKSIVANGLARRCIVQVSYAIGVPEPLSVFVDSYGTGKIPD+EIL+IVKE+FDFRPGM+TINLDLKRGGN RFLKTAAYGHFGRDDPDFTWEVVKPLKWEKPQA
Sbjct:  207 IAADLKEHVIKPVIPEKYLDEKTIFHLNPSGRFVIGGPHGDAGLTGRKIIIDTYGGWGAHGGGAFSGKDPTKVDRSGAYVVRQAAKSIVANGLARRCIVQVSYAIGVPEPLSVFVDSYGTGKIPDREILQIVKENFDFRPGMITINLDLKRGGNSRFLKTAAYGHFGRDDPDFTWEVVKPLKWEKPQA 394
[Close]
BLAST of CX671949 vs. ExPASy Swiss-Prot
Match: METK2_ELAUM (S-adenosylmethionine synthetase 2 OS=Elaeagnus umbellata GN=SAMS2 PE=2 SV=1)

HSP 1 Score: 345.895 bits (886), Expect = 1.863e-94
Identity = 169/188 (89.89%), Postives = 175/188 (93.09%), Query Frame = -3 
Query:  339 IAADLKEHVIKPVIPEKYLDEKTIFHLNPSGRFVIGGPHGDAGLTGRKIIIDTYXXXXXXXXXXXXGKDPTKVDRSGAYIVRQAAKSIVANGLARRCIVQVSYAIGVPEPLSVFVDSYGTGKIPDKEILKIVKESFDFRPGMMTINLDLKRGGNGRFLKTAAYGHFGRDDPDFTWEVVKPLKWEKPQA 902
            IAADLKEHVIKPV+PEKYLDEKTIFHLNPSGRFVIGGPHGDAGLTGRKIIIDTY            GKDPTKVDRSGAYIVRQAAKSIVANGLARRCIVQVSYAIGVP+PLSVFVDSYGTGKIPDKEILKIVKE+FDFRPGM+TINLDLKRGGN RFLKTAAYGHFGRDDPDFTWE+VKPLKWEKPQ+
Sbjct:  206 IAADLKEHVIKPVVPEKYLDEKTIFHLNPSGRFVIGGPHGDAGLTGRKIIIDTYGGWGAHGGGAFSGKDPTKVDRSGAYIVRQAAKSIVANGLARRCIVQVSYAIGVPDPLSVFVDSYGTGKIPDKEILKIVKENFDFRPGMITINLDLKRGGNDRFLKTAAYGHFGRDDPDFTWEIVKPLKWEKPQS 393
[Close]
BLAST of CX671949 vs. ExPASy Swiss-Prot
Match: METK1_SOLTU (S-adenosylmethionine synthetase 1 OS=Solanum tuberosum GN=METK1 PE=2 SV=1)

HSP 1 Score: 345.125 bits (884), Expect = 3.178e-94
Identity = 170/187 (90.91%), Postives = 174/187 (93.05%), Query Frame = -3 
Query:  342 IAADLKEHVIKPVIPEKYLDEKTIFHLNPSGRFVIGGPHGDAGLTGRKIIIDTYXXXXXXXXXXXXGKDPTKVDRSGAYIVRQAAKSIVANGLARRCIVQVSYAIGVPEPLSVFVDSYGTGKIPDKEILKIVKESFDFRPGMMTINLDLKRGGNGRFLKTAAYGHFGRDDPDFTWEVVKPLKWEKPQ 902
            IA DLKEHVIKPVIPEKYLDEKTIFHLNPSGRFVIGGPHGDAGLTGRKIIIDTY            GKDPTKVDRSGAYIVRQAAKSIVA+GLARRCIVQVSYAIGVPEPLSVFVD+YGTGKIPDKEILKIVKE+FDFRPGMM+INLDLKRGGNGRFLKTAAYGHFGRDDPDFTWEVVKPLKWEKPQ
Sbjct:  206 IARDLKEHVIKPVIPEKYLDEKTIFHLNPSGRFVIGGPHGDAGLTGRKIIIDTYGGWGAHGGGAFSGKDPTKVDRSGAYIVRQAAKSIVASGLARRCIVQVSYAIGVPEPLSVFVDTYGTGKIPDKEILKIVKENFDFRPGMMSINLDLKRGGNGRFLKTAAYGHFGRDDPDFTWEVVKPLKWEKPQ 392
[Close]
BLAST of CX671949 vs. ExPASy Swiss-Prot
Match: METK1_POPTR (S-adenosylmethionine synthetase 1 OS=Populus trichocarpa GN=METK1 PE=2 SV=1)

HSP 1 Score: 345.125 bits (884), Expect = 3.178e-94
Identity = 173/188 (92.02%), Postives = 175/188 (93.09%), Query Frame = -3 
Query:  339 IAADLKEHVIKPVIPEKYLDEKTIFHLNPSGRFVIGGPHGDAGLTGRKIIIDTYXXXXXXXXXXXXGKDPTKVDRSGAYIVRQAAKSIVANGLARRCIVQVSYAIGVPEPLSVFVDSYGTGKIPDKEILKIVKESFDFRPGMMTINLDLKRGGNGRFLKTAAYGHFGRDDPDFTWEVVKPLKWEKPQA 902
            IAADLKEHVIKPVIPEKYLDEKTIFHLNPSGRFVIGGPHGDAGLTGRKIIIDTY            GKDPTKVDRSGAYIVRQAAKSIVANGLARRCIVQVSYAIGVPEPLSVFVD+YGTGKIPDKEILKIVKE+FDFRPGMMTINLDLKRGGN RFLKTAAYGHFGRDDPDFTWEVVKPLKWEKPQA
Sbjct:  206 IAADLKEHVIKPVIPEKYLDEKTIFHLNPSGRFVIGGPHGDAGLTGRKIIIDTYGGWGAHGGGAFSGKDPTKVDRSGAYIVRQAAKSIVANGLARRCIVQVSYAIGVPEPLSVFVDTYGTGKIPDKEILKIVKENFDFRPGMMTINLDLKRGGN-RFLKTAAYGHFGRDDPDFTWEVVKPLKWEKPQA 392
[Close]
BLAST of CX671949 vs. ExPASy Swiss-Prot
Match: METK2_VITVI (S-adenosylmethionine synthetase 2 OS=Vitis vinifera GN=METK2 PE=3 SV=1)

HSP 1 Score: 344.739 bits (883), Expect = 4.150e-94
Identity = 170/188 (90.43%), Postives = 175/188 (93.09%), Query Frame = -3 
Query:  339 IAADLKEHVIKPVIPEKYLDEKTIFHLNPSGRFVIGGPHGDAGLTGRKIIIDTYXXXXXXXXXXXXGKDPTKVDRSGAYIVRQAAKSIVANGLARRCIVQVSYAIGVPEPLSVFVDSYGTGKIPDKEILKIVKESFDFRPGMMTINLDLKRGGNGRFLKTAAYGHFGRDDPDFTWEVVKPLKWEKPQA 902
            IAADLKEHVIKPVIPEKYLDEKTIFHLNPSGRFVIGGPHGDAGLTGRKIIIDTY            GKDPTKVDRSGAYIVRQAAKSIVANGLARRCIVQVSYAIGVPEPLSVFVD+YGTGKIPD+EILKIVKE+FDFRPGM++INLDLKRGGNGRFLKTAAYGHFGRDDPDFTWEVVKPLKWEK QA
Sbjct:  206 IAADLKEHVIKPVIPEKYLDEKTIFHLNPSGRFVIGGPHGDAGLTGRKIIIDTYGGWGAHGGGAFSGKDPTKVDRSGAYIVRQAAKSIVANGLARRCIVQVSYAIGVPEPLSVFVDTYGTGKIPDREILKIVKENFDFRPGMISINLDLKRGGNGRFLKTAAYGHFGRDDPDFTWEVVKPLKWEKTQA 393
[Close]
BLAST of CX671949 vs. ExPASy Swiss-Prot
Match: METK1_ELAUM (S-adenosylmethionine synthetase 1 OS=Elaeagnus umbellata GN=SAMS1 PE=2 SV=1)

HSP 1 Score: 344.354 bits (882), Expect = 5.420e-94
Identity = 168/188 (89.36%), Postives = 174/188 (92.55%), Query Frame = -3 
Query:  339 IAADLKEHVIKPVIPEKYLDEKTIFHLNPSGRFVIGGPHGDAGLTGRKIIIDTYXXXXXXXXXXXXGKDPTKVDRSGAYIVRQAAKSIVANGLARRCIVQVSYAIGVPEPLSVFVDSYGTGKIPDKEILKIVKESFDFRPGMMTINLDLKRGGNGRFLKTAAYGHFGRDDPDFTWEVVKPLKWEKPQA 902
            IAADLKEHVIKPVIPEKYLDEKTIFHLNPSGRFVIGGPHGDAGLTGRKIIIDTY            GKDPTKVDRSGAYIVRQAAKSIVANGLARRC+VQVSYAIGVPEPLSVFVDSYGTG+IPDKEIL IVKE+FDFRPGM+TINLDLKRGGNGRFLKTA YGHFGRDDPDFTWE+VKPLKWEKPQ+
Sbjct:  206 IAADLKEHVIKPVIPEKYLDEKTIFHLNPSGRFVIGGPHGDAGLTGRKIIIDTYGGWGAHGGGAFSGKDPTKVDRSGAYIVRQAAKSIVANGLARRCLVQVSYAIGVPEPLSVFVDSYGTGQIPDKEILNIVKENFDFRPGMITINLDLKRGGNGRFLKTAGYGHFGRDDPDFTWEIVKPLKWEKPQS 393
[Close]
BLAST of CX671949 vs. ExPASy Swiss-Prot
Match: METK5_VITVI (S-adenosylmethionine synthetase 5 OS=Vitis vinifera GN=METK5 PE=3 SV=1)

HSP 1 Score: 343.584 bits (880), Expect = 9.245e-94
Identity = 170/185 (91.89%), Postives = 172/185 (92.97%), Query Frame = -3 
Query:  348 IAADLKEHVIKPVIPEKYLDEKTIFHLNPSGRFVIGGPHGDAGLTGRKIIIDTYXXXXXXXXXXXXGKDPTKVDRSGAYIVRQAAKSIVANGLARRCIVQVSYAIGVPEPLSVFVDSYGTGKIPDKEILKIVKESFDFRPGMMTINLDLKRGGNGRFLKTAAYGHFGRDDPDFTWEVVKPLKWEK 902
            IAADLKEHVIKPVIPEKYLDEKTIFHLNPSGRFVIGGPHGDAGLTGRKIIIDTY            GKDPTKVDRSGAYIVRQAAKSIVANGLARRCIVQVSYAIGVPEPLSVFVDSYGTGKIPDKEILKIVKE+FDFRPGM+ INLDLKRGGNGRFLKTAAYGHFGRDDPDFTWEVVKPLKWEK
Sbjct:  206 IAADLKEHVIKPVIPEKYLDEKTIFHLNPSGRFVIGGPHGDAGLTGRKIIIDTYGGWGAHGGGAFSGKDPTKVDRSGAYIVRQAAKSIVANGLARRCIVQVSYAIGVPEPLSVFVDSYGTGKIPDKEILKIVKENFDFRPGMIAINLDLKRGGNGRFLKTAAYGHFGRDDPDFTWEVVKPLKWEK 390
[Close]
BLAST of CX671949 vs. ExPASy Swiss-Prot
Match: METK_BRARP (S-adenosylmethionine synthetase OS=Brassica rapa subsp. pekinensis GN=SAMS PE=2 SV=1)

HSP 1 Score: 340.502 bits (872), Expect = 7.827e-93
Identity = 166/188 (88.30%), Postives = 173/188 (92.02%), Query Frame = -3 
Query:  339 IAADLKEHVIKPVIPEKYLDEKTIFHLNPSGRFVIGGPHGDAGLTGRKIIIDTYXXXXXXXXXXXXGKDPTKVDRSGAYIVRQAAKSIVANGLARRCIVQVSYAIGVPEPLSVFVDSYGTGKIPDKEILKIVKESFDFRPGMMTINLDLKRGGNGRFLKTAAYGHFGRDDPDFTWEVVKPLKWEKPQA 902
            IA DLKEHVIKP+IPEKYLD+KTIFHLNPSGRFVIGGPHGDAGLTGRKIIIDTY            GKDPTKVDRSGAYIVRQAAKS+VANG+ARR +VQVSYAIGVPEPLSVFVD+YGTG IPDKEILKIVKESFDFRPGMMTINLDLKRGGNGRFLKTAAYGHFGRDDPDFTWEVVKPLKW+KPQA
Sbjct:  206 IARDLKEHVIKPIIPEKYLDDKTIFHLNPSGRFVIGGPHGDAGLTGRKIIIDTYGGWGAHGGGAFSGKDPTKVDRSGAYIVRQAAKSVVANGMARRALVQVSYAIGVPEPLSVFVDTYGTGLIPDKEILKIVKESFDFRPGMMTINLDLKRGGNGRFLKTAAYGHFGRDDPDFTWEVVKPLKWDKPQA 393
[Close]
BLAST of CX671949 vs. ExPASy Swiss-Prot
Match: METK5_BRAJU (S-adenosylmethionine synthetase 5 OS=Brassica juncea GN=MSAMS5 PE=2 SV=1)

HSP 1 Score: 340.502 bits (872), Expect = 7.827e-93
Identity = 166/188 (88.30%), Postives = 173/188 (92.02%), Query Frame = -3 
Query:  339 IAADLKEHVIKPVIPEKYLDEKTIFHLNPSGRFVIGGPHGDAGLTGRKIIIDTYXXXXXXXXXXXXGKDPTKVDRSGAYIVRQAAKSIVANGLARRCIVQVSYAIGVPEPLSVFVDSYGTGKIPDKEILKIVKESFDFRPGMMTINLDLKRGGNGRFLKTAAYGHFGRDDPDFTWEVVKPLKWEKPQA 902
            IA DLKEHVIKP+IPEKYLD+KTIFHLNPSGRFVIGGPHGDAGLTGRKIIIDTY            GKDPTKVDRSGAYIVRQAAKS+VANG+ARR +VQVSYAIGVPEPLSVFVD+YGTG IPDKEILKIVKESFDFRPGMMTINLDLKRGGNGRFLKTAAYGHFGRDDPDFTWEVVKPLKW+KPQA
Sbjct:  206 IARDLKEHVIKPIIPEKYLDDKTIFHLNPSGRFVIGGPHGDAGLTGRKIIIDTYGGWGAHGGGAFSGKDPTKVDRSGAYIVRQAAKSVVANGMARRALVQVSYAIGVPEPLSVFVDTYGTGLIPDKEILKIVKESFDFRPGMMTINLDLKRGGNGRFLKTAAYGHFGRDDPDFTWEVVKPLKWDKPQA 393
[Close]
BLAST of CX671949 vs. ExPASy Swiss-Prot
Match: METK3_BRAJU (S-adenosylmethionine synthetase 3 OS=Brassica juncea GN=MSAMS3 PE=2 SV=1)

HSP 1 Score: 340.502 bits (872), Expect = 7.827e-93
Identity = 166/188 (88.30%), Postives = 173/188 (92.02%), Query Frame = -3 
Query:  339 IAADLKEHVIKPVIPEKYLDEKTIFHLNPSGRFVIGGPHGDAGLTGRKIIIDTYXXXXXXXXXXXXGKDPTKVDRSGAYIVRQAAKSIVANGLARRCIVQVSYAIGVPEPLSVFVDSYGTGKIPDKEILKIVKESFDFRPGMMTINLDLKRGGNGRFLKTAAYGHFGRDDPDFTWEVVKPLKWEKPQA 902
            IA DLKEHVIKP+IPEKYLD+KTIFHLNPSGRFVIGGPHGDAGLTGRKIIIDTY            GKDPTKVDRSGAYIVRQAAKS+VANG+ARR +VQVSYAIGVPEPLSVFVD+YGTG IPDKEILKIVKESFDFRPGMMTINLDLKRGGNGRFLKTAAYGHFGRDDPDFTWEVVKPLKW+KPQA
Sbjct:  206 IARDLKEHVIKPIIPEKYLDDKTIFHLNPSGRFVIGGPHGDAGLTGRKIIIDTYGGWGAHGGGAFSGKDPTKVDRSGAYIVRQAAKSVVANGMARRALVQVSYAIGVPEPLSVFVDTYGTGLIPDKEILKIVKESFDFRPGMMTINLDLKRGGNGRFLKTAAYGHFGRDDPDFTWEVVKPLKWDKPQA 393
The following BLAST results are available for this feature:
BLAST of CX671949 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 500
Match NameE-valueIdentityDescription
METK_MEDTR1.426e-9490.43S-adenosylmethionine synthetase OS=Medicago trunca... [more]
METK2_ELAUM1.863e-9489.89S-adenosylmethionine synthetase 2 OS=Elaeagnus umb... [more]
METK1_SOLTU3.178e-9490.91S-adenosylmethionine synthetase 1 OS=Solanum tuber... [more]
METK1_POPTR3.178e-9492.02S-adenosylmethionine synthetase 1 OS=Populus trich... [more]
METK2_VITVI4.150e-9490.43S-adenosylmethionine synthetase 2 OS=Vitis vinifer... [more]
METK1_ELAUM5.420e-9489.36S-adenosylmethionine synthetase 1 OS=Elaeagnus umb... [more]
METK5_VITVI9.245e-9491.89S-adenosylmethionine synthetase 5 OS=Vitis vinifer... [more]
METK_BRARP7.827e-9388.30S-adenosylmethionine synthetase OS=Brassica rapa s... [more]
METK5_BRAJU7.827e-9388.30S-adenosylmethionine synthetase 5 OS=Brassica junc... [more]
METK3_BRAJU7.827e-9388.30S-adenosylmethionine synthetase 3 OS=Brassica junc... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS10_14B01_b Madame Vinous Sweet Orange Multiple Pathogen-Infected cDNA Library UCRCS10 Citrus sinensis cDNA clone UCRCS10-14B01-C2-6.b, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX671949 ID=CX671949; Name=CX671949; organism=Citrus sinensis; type=EST; length=904bp
TTTTTAATACAACTCTGCTGCTGCCTTCATTCTACATTCCAAAAATAGTC
GTAAGCAAAAGGAAGAATTTTACTAATTCCAGGCACCAGTTGAGCAAAAT
TCTCAATCGATATCACTACACAACAGTGGTGACATGGTACATTAAACCAA
AACCAAAAAAGAAGTGGGGAAAGAAGAAAAAGAAAGGAATTGAATGGGGA
ACATGTATGAGTTCTGAACACAGGAGATTTGCTTAGTATTACAAAGCAGC
AGCAAGATAATATTCAAATTATTCATCCACTACCAATAGAAGCAAACTTG
AACAGCAGGGATAGTTTTCACTTTTCAACTCAAATTTAAGCTTGAGGCTT
TTCCCACTTGAGGGGCTTCACAACTTCCCAAGTGAAGTCTGGGTCATCCC
TGCCAAAGTGTCCATAGGCAGCAGTCTTCAAGAACCTGCCATTACCGCCC
CTTTTGAGATCCAAATTGATGGTCATCATTCCTGGCCTGAAATCAAAGCT
TTCCTTCACAATTTTGAGGATCTCCTTGTCAGGAATCTTGCCGGTTCCAT
ATGAGTCCACAAAAACAGACAATGGCTCAGGCACACCAATGGCATAGGAG
ACTTGGACAATGCACCTGCGAGCAAGCCCGTTTGCAACAATGCTCTTAGC
AGCCTGCCTAACAATGTATGCACCACTCCTATCCACCTTAGTAGGGTCTT
TTCCAGAGAAAGCACCGCCACCATGGGCTCCCCAGCCACCATAAGTGTCG
ATGATGATCTTACGTCCAGTGAGACCAGCATCACCATGAGGCCCACCAAT
GACAAAACGACCTGATGGATTAAGGTGGAAGATGGTCTTCTCATCAAGGT
ACTTCTCGGGGATGACAGGCTTAATGACGTGCTCCTTAAGGTCAGCAGCA
ATTT
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