CX671948
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CX671948 vs. ExPASy Swiss-Prot
Match: SODC_IPOBA (Superoxide dismutase [Cu-Zn] OS=Ipomoea batatas GN=SODCC PE=2 SV=2) HSP 1 Score: 104.375 bits (259), Expect = 5.478e-22 Identity = 65/150 (43.33%), Postives = 82/150 (54.67%), Query Frame = 2 Query: 47 MVNASADITGTNGRKGTVSFSVEGSGPTTVKGSLSGLPPGDHALIIHTYGNISNDWISTGPPFKPAGAD-----------GFLENITVTSEGIATFEIY-KTIPLSGTNSVIARGLVVHSSP-------------SPDPGDGVAWGTIGL 421 MV A A ++ + G GT+ FS EG GPTTV G++SGL PG H +H G+ +N +STGP F PAG + G L NITV +G A+F I K IPL+G NSVI R +VVH P + + G VA G IGL Sbjct: 1 MVKAVAVLSSSEGVSGTIFFSQEGDGPTTVTGNVSGLKPGLHGFHVHALGDTTNGCMSTGPHFNPAGKEHGAPGDDNRHAGDLGNITVGEDGTASFTITDKQIPLTGANSVIGRAVVVHGDPDDLGKGGHELSKSTGNAGGRVACGIIGL 150
BLAST of CX671948 vs. ExPASy Swiss-Prot
Match: SODC1_MESCR (Superoxide dismutase [Cu-Zn] 1 OS=Mesembryanthemum crystallinum GN=SODCC.1 PE=2 SV=1) HSP 1 Score: 103.99 bits (258), Expect = 7.155e-22 Identity = 63/150 (42.00%), Postives = 83/150 (55.33%), Query Frame = 2 Query: 47 MVNASADITGTNGRKGTVSFSVEGSGPTTVKGSLSGLPPGDHALIIHTYGNISNDWISTGPPFKPAGAD-----------GFLENITVTSEGIATFEIYKT-IPLSGTNSVIARGLVVHSSP-------------SPDPGDGVAWGTIGL 421 MV A ++ + G GTV F+ EGSGPTTV G++SGL PG H +H G+ +N +STGP F PAG + G L NITV +G ATF I + IPL+G NS++ R +VVH+ P + + G VA G IGL Sbjct: 1 MVKAVVVLSSSEGVSGTVQFTQEGSGPTTVTGNVSGLRPGLHGFHVHALGDTTNGCMSTGPHFNPAGKEHGAPEDETRHAGDLGNITVGDDGTATFTIIDSQIPLTGPNSIVGRAVVVHADPDDLGRGGHELSKATGNAGGRVACGVIGL 150
BLAST of CX671948 vs. ExPASy Swiss-Prot
Match: SODC_ZANAE (Superoxide dismutase [Cu-Zn] OS=Zantedeschia aethiopica GN=SODCC PE=2 SV=1) HSP 1 Score: 103.219 bits (256), Expect = 1.220e-21 Identity = 59/129 (45.74%), Postives = 77/129 (59.69%), Query Frame = 2 Query: 47 MVNASADITGTNGRKGTVSFSVEGSGPTTVKGSLSGLPPGDHALIIHTYGNISNDWISTGPPFKPAGAD-----------GFLENITVTSEGIATFEIYKT-IPLSGTNSVIARGLVVHSSPSPDPGDG 397 MV A A +TG+ G +GTV F+ EG GPTT+ GSLSGL PG H +H G+ +N +STGP F PAG + G L N+TV +G F + + IPL+G NSV+ R +VVH+ S D G G Sbjct: 1 MVKAVAVLTGSEGVQGTVFFAQEGEGPTTITGSLSGLKPGLHGFHVHALGDTTNGCMSTGPHFNPAGKEHGAPEDGNRHAGDLGNVTVGEDGTVNFTVTDSQIPLTGLNSVVGRAVVVHAD-SDDLGKG 128
BLAST of CX671948 vs. ExPASy Swiss-Prot
Match: SODC_PEA (Superoxide dismutase [Cu-Zn] OS=Pisum sativum GN=SODCC PE=2 SV=2) HSP 1 Score: 100.908 bits (250), Expect = 6.057e-21 Identity = 63/150 (42.00%), Postives = 82/150 (54.67%), Query Frame = 2 Query: 47 MVNASADITGTNGRKGTVSFSVEGSGPTTVKGSLSGLPPGDHALIIHTYGNISNDWISTGPPFKPAGAD-----------GFLENITVTSEGIATFEIYKT-IPLSGTNSVIARGLVVHSSP-------------SPDPGDGVAWGTIGL 421 MV A A ++ +N GT++FS EG+GPTTV G+L+GL PG H IH G+ +N ISTGP F P G + G L NI V +G +F I IPL+GTNS+I R +VVH+ P + + G VA G IGL Sbjct: 1 MVKAVAVLSNSNEVSGTINFSQEGNGPTTVTGTLAGLKPGLHGFHIHALGDTTNGCISTGPHFNPNGKEHGAPEDETRHAGDLGNINVGDDGTVSFTITDNHIPLTGTNSIIGRAVVVHADPDDLGKGGHELSKTTGNAGGRVACGIIGL 150
BLAST of CX671948 vs. ExPASy Swiss-Prot
Match: SODC_ANACO (Superoxide dismutase [Cu-Zn] OS=Ananas comosus GN=SOD1 PE=2 SV=1) HSP 1 Score: 100.908 bits (250), Expect = 6.057e-21 Identity = 62/150 (41.33%), Postives = 81/150 (54.00%), Query Frame = 2 Query: 47 MVNASADITGTNGRKGTVSFSVEGSGPTTVKGSLSGLPPGDHALIIHTYGNISNDWISTGPPFKPAGAD-----------GFLENITVTSEGIATFEIYKT-IPLSGTNSVIARGLVVHSSP-------------SPDPGDGVAWGTIGL 421 MV A A + + G KGT+ F+ EG GPTTV GS+SGL PG H +H G+ +N +STGP F PAG + G L N+TV +G I + IPLSG+NS+I R +VVH+ P + + G VA G IGL Sbjct: 1 MVKAVAVLGSSEGVKGTIYFTQEGDGPTTVTGSISGLKPGLHGFHVHALGDTTNGCMSTGPHFNPAGNEHGAPEDETRHAGDLGNVTVGEDGTVNVNIVDSQIPLSGSNSIIGRAVVVHADPDDLGKGGHELSKTTGNAGGRVACGIIGL 150
BLAST of CX671948 vs. ExPASy Swiss-Prot
Match: SODC_PAUKA (Superoxide dismutase [Cu-Zn] OS=Paulownia kawakamii GN=SODCC PE=2 SV=1) HSP 1 Score: 100.138 bits (248), Expect = 1.033e-20 Identity = 56/129 (43.41%), Postives = 75/129 (58.14%), Query Frame = 2 Query: 47 MVNASADITGTNGRKGTVSFSVEGSGPTTVKGSLSGLPPGDHALIIHTYGNISNDWISTGPPFKPAGAD-----------GFLENITVTSEGIATFEIY-KTIPLSGTNSVIARGLVVHSSPSPDPGDG 397 MV A ++ + G GT+ F+ EG GPTTV G++SGL PG H +H G+ +N +STGP F PAG + G L N+TV +G A F I K IPL+G +S+I R +VVH+ P D G G Sbjct: 1 MVKGVAVLSSSEGVSGTIYFTQEGDGPTTVTGNVSGLKPGPHGFHVHALGDTTNGCLSTGPHFNPAGKEHGAPDDEVRHAGDLGNVTVGEDGTAAFTIVDKQIPLTGPHSIIGRAVVVHADPD-DLGKG 128
BLAST of CX671948 vs. ExPASy Swiss-Prot
Match: SODC2_ORYSJ (Superoxide dismutase [Cu-Zn] 2 OS=Oryza sativa subsp. japonica GN=SODCC2 PE=1 SV=2) HSP 1 Score: 97.8265 bits (242), Expect = 5.128e-20 Identity = 59/150 (39.33%), Postives = 81/150 (54.00%), Query Frame = 2 Query: 47 MVNASADITGTNGRKGTVSFSVEGSGPTTVKGSLSGLPPGDHALIIHTYGNISNDWISTGPPFKPAGAD-----------GFLENITVTSEGIATFEIYKT-IPLSGTNSVIARGLVVHSSP-------------SPDPGDGVAWGTIGL 421 MV A A + + G KGT+ FS EG GPT+V GS+SGL PG H +H G+ +N +STGP F P G + G L NIT ++G+A + + IPL+G +S+I R +VVH+ P + + G VA G IGL Sbjct: 1 MVKAVAVLASSEGVKGTIFFSQEGDGPTSVTGSVSGLKPGLHGFHVHALGDTTNGCMSTGPHFNPTGKEHGAPQDENRHAGDLGNITAGADGVANVNVSDSQIPLTGAHSIIGRAVVVHADPDDLGKGGHELSKTTGNAGGRVACGIIGL 150
BLAST of CX671948 vs. ExPASy Swiss-Prot
Match: SODC4_MAIZE (Superoxide dismutase [Cu-Zn] 4A OS=Zea mays GN=SODCC.3 PE=2 SV=2) HSP 1 Score: 97.0561 bits (240), Expect = 8.746e-20 Identity = 58/150 (38.67%), Postives = 81/150 (54.00%), Query Frame = 2 Query: 47 MVNASADITGTNGRKGTVSFSVEGSGPTTVKGSLSGLPPGDHALIIHTYGNISNDWISTGPPFKPAGAD-----------GFLENITVTSEGIATFEIYKT-IPLSGTNSVIARGLVVHSSP-------------SPDPGDGVAWGTIGL 421 MV A A + + G KGT+ F+ EG GPTTV GS+SGL PG H +H G+ +N +STGP + PA + G L N+T ++G+A + + IPL+G NS+I R +VVH+ P + + G VA G IGL Sbjct: 1 MVKAVAVLGSSEGVKGTIFFTQEGDGPTTVTGSVSGLKPGLHGFHVHALGDTTNGCMSTGPHYNPASKEHGAPEDENRHAGDLGNVTAGADGVANINVTDSQIPLTGPNSIIGRAVVVHADPDDLGKGGHELSKSTGNAGGRVACGIIGL 150
BLAST of CX671948 vs. ExPASy Swiss-Prot
Match: SODC_SPIOL (Superoxide dismutase [Cu-Zn] OS=Spinacia oleracea GN=SODCC PE=2 SV=1) HSP 1 Score: 96.6709 bits (239), Expect = 1.142e-19 Identity = 60/150 (40.00%), Postives = 80/150 (53.33%), Query Frame = 2 Query: 47 MVNASADITGTNGRKGTVSFSVEGSGPTTVKGSLSGLPPGDHALIIHTYGNISNDWISTGPPFKPAGAD-----------GFLENITVTSEGIATFEIYKT-IPLSGTNSVIARGLVVHSSP-------------SPDPGDGVAWGTIGL 421 M A ++ + G GTV F+ EG GPTTV G++SGL PG H +H G+ +N +STGP + P G + G L NITV +G ATF I + IPLSG NS++ R +VVH+ P + + G VA G IGL Sbjct: 1 MGKAVVVLSSSEGVSGTVYFAQEGDGPTTVTGNVSGLKPGLHGFHVHALGDTTNGCMSTGPHYNPNGKEHGAPEDDVRHAGDLGNITVGDDGTATFTIIDSQIPLSGPNSIVGRAVVVHAEPDDLGRGGHELSKTTGNAGGRVACGIIGL 150
BLAST of CX671948 vs. ExPASy Swiss-Prot
Match: SODC2_SOLLC (Superoxide dismutase [Cu-Zn] 2 OS=Solanum lycopersicum GN=SODCC.5 PE=3 SV=3) HSP 1 Score: 96.2857 bits (238), Expect = 1.492e-19 Identity = 55/129 (42.64%), Postives = 75/129 (58.14%), Query Frame = 2 Query: 47 MVNASADITGTNGRKGTVSFSVEGSGPTTVKGSLSGLPPGDHALIIHTYGNISNDWISTGPPFKPAGAD-----------GFLENITVTSEGIATFEIY-KTIPLSGTNSVIARGLVVHSSPSPDPGDG 397 MV A A + + G GT+ F+ +G+ PTTV G++SGL PG H +H G+ +N +STGP + PAG + G L NITV +G A+F I K IPL+G S+I R +VVH+ P D G G Sbjct: 1 MVKAVAVLNSSEGVSGTILFTQDGAAPTTVNGNISGLKPGLHGFHVHALGDTTNGCMSTGPHYNPAGKEHGAPEDEVRHAGDLGNITVGEDGTASFTITDKQIPLTGPQSIIGRAVVVHADPD-DLGKG 128 The following BLAST results are available for this feature:
BLAST of CX671948 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 46
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Sequences
The
following sequences are available for this feature:
EST sequence >CX671948 ID=CX671948; Name=CX671948; organism=Citrus sinensis; type=EST; length=654bpback to top |