CX671943

Overview
NameCX671943
Unique NameCX671943
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length751
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
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BLAST of CX671943 vs. ExPASy Swiss-Prot
Match: BUB1_DICDI (Probable inactive serine/threonine-protein kinase bub1 OS=Dictyostelium discoideum GN=bub1 PE=3 SV=1)

HSP 1 Score: 78.5666 bits (192), Expect = 4.135e-14
Identity = 52/210 (24.76%), Postives = 90/210 (42.86%), Query Frame = 1 
Query:   88 IKSYSGTDPLLPWLQGIKKMXXXXXXXXXXXXXXRFLQKCAQTFESDRRYRNDMRYLRIWLHLMDFVDDPRVMLRTMEVNHIGTKRSLFYQANALXXXXXXXXXXXXXXXHLGVQNLAEPADELQKSYEQFLHRMERHNKKRIQQQERKTSRKPLSARSIPFHYNENEQKSEDIGRVDHKNAEIKKISRESSQNVKQLMQANHVKLSATT 717
            I  Y G DP+  WL+ IK +                L++C + F S  +Y+ND RYLRIW+   D   DP  +   +EV  IG   SL Y+A A+                 G++  A+P + LQ+ +  F  R+    K + Q Q+ +  ++  + +         +Q+ ++ G      + +  IS  S  + ++  Q   + L  +T
Sbjct:   51 INEYQGEDPIDNWLKYIKWVQQSYPGGNMKEQLIVLLERCTRLFLSTEKYKNDPRYLRIWITYADMCRDPIEVFSFLEVQRIGFYLSLLYEARAIVYENKGNYEQADKSFKQGIERKAQPIERLQQKHLDFERRLIARLKHQQQHQQLQQQQQQQNDQL-------EQQQLDENGNTKLTRSALGTISSSSVHSERKSQQTKGLPLGNST 253
The following BLAST results are available for this feature:
BLAST of CX671943 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 1
Match NameE-valueIdentityDescription
BUB1_DICDI4.135e-1424.76Probable inactive serine/threonine-protein kinase ... [more]
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Properties
Property NameValue
Genbank descriptionUCRCS10_14A09_g Madame Vinous Sweet Orange Multiple Pathogen-Infected cDNA Library UCRCS10 Citrus sinensis cDNA clone UCRCS10-14A09-A18-5.g, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX671943 ID=CX671943; Name=CX671943; organism=Citrus sinensis; type=EST; length=751bp
CGCCATCTTCGAACAGCGTCTCTCTCCAAAGCCATGGCCAAATCCGACGC
CGTTTATGATACTTTCTTCTCTTCATTGATACAAGACATCAAATCTTACT
CCGGCACCGACCCTCTTCTCCCTTGGCTCCAAGGGATAAAAAAGATGAAG
GACTCATTGCCTTCTAAGCTGTTAAAGGAGAAGCTGCCTCGCTTTCTGCA
AAAATGCGCTCAGACATTTGAATCCGATCGCCGTTATCGAAACGACATGC
GTTATCTTCGCATTTGGTTACATTTGATGGACTTCGTGGATGATCCAAGA
GTGATGTTGAGAACAATGGAGGTGAATCACATTGGTACAAAGCGGTCTTT
GTTCTATCAAGCGAATGCTTTATATTATGAGAAGATGAAGAAATTTGAGG
AGGCTGAGAAAATGTACCATCTGGGTGTGCAAAACCTTGCAGAGCCTGCC
GATGAGTTGCAGAAATCTTATGAGCAATTCCTTCATCGCATGGAGAGACA
CAATAAGAAGAGAATCCAGCAGCAGGAACGGAAAACCTCTAGAAAGCCTC
TGTCTGCAAGGAGCATCCCTTTCCATTACAATGAGAATGAACAAAAGAGT
GAAGACATAGGCAGAGTTGACCATAAAAATGCTGAAATCAAGAAGATATC
GAGGGAAAGCTCCCAGAATGTGAAGCAACTAATGCAAGCTAACCATGTTA
AGCTTTCGGCGACGACGTCTAATATTGGATCAGGTGATATGAAAGAGGAA
C
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