CX671941

Overview
NameCX671941
Unique NameCX671941
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length785
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CX671941 vs. ExPASy Swiss-Prot
Match: S29A3_BOVIN (Equilibrative nucleoside transporter 3 OS=Bos taurus GN=SLC29A3 PE=2 SV=1)

HSP 1 Score: 73.1738 bits (178), Expect = 1.857e-12
Identity = 53/221 (23.98%), Postives = 90/221 (40.72%), Query Frame = 3
Query:  162 PPDTFHLAYIIYFTLGLGFLLPWNAFITAVDYFSYLYPEAS----------------VDRIFAVAYMLVGLFCLVIIVFYAHKSDAWVRINXXXXXXXXXXXXXXXXXXXYIKGRVGLYDGFTVTVGAVALSGLADALVQGGLIGAAGELPDRYMQALVAGTAGSGVLVSVLRILTKAVYTQDAIGLRKSANLYFAVGIVVMVICIVFYNVAHRLPVIKYH 776
            P D F+  YII+F+LG+G LLPWN F+TA +Y+ +     S                 +   AVA  +  + CL +     ++    +R+                     +      +  FT+T+  +A+      +    + G  G  P R  QAL++G A  G L +V  ++  AV    A  +  S   +F    + + +CI  Y +  RL   +Y+
Sbjct:   46 PEDRFNGTYIIFFSLGIGGLLPWNFFVTAQEYWIFKLSNCSSPAAGEEPKDSDILNYFESYLAVASTVPSVLCLALNFLLVNRVP--IRVRVLASLTVMLAIFIVMTVLVKVDTSSWTHSFFTITITCMAILSGTSTIFNSSVFGMTGSFPMRNSQALISGGAMGGTLSAVASLVDLAV----ASDVTDSTLAFFLTADIFLALCIGLYLLLPRLDYARYY 260          
BLAST of CX671941 vs. ExPASy Swiss-Prot
Match: S29A3_HUMAN (Equilibrative nucleoside transporter 3 OS=Homo sapiens GN=SLC29A3 PE=1 SV=2)

HSP 1 Score: 72.0182 bits (175), Expect = 4.137e-12
Identity = 57/221 (25.79%), Postives = 91/221 (41.18%), Query Frame = 3
Query:  162 PPDTFHLAYIIYFTLGLGFLLPWNAFITAVDYFSYLY-----------PEAS-----VDRIFAVAYMLVGLFCLVIIVFYAHKSDAWVRINXXXXXXXXXXXXXXXXXXXYIKGRVGLYDGFTVTVGAVALSGLADALVQGGLIGAAGELPDRYMQALVAGTAGSGVLVSVLRILTKAVYTQDAIGLRKSANLYFAVGIVVMVICIVFYNVAHRLPVIKYH 776
            P D F   YII+F+LG+G LLPWN FITA +Y+ +             PE S      +   AVA  +  + CLV      ++    +R+                     +         F VT+  + +   A  +    + G  G  P R  QAL++G A  G + +V  ++  A  +     +R SA  +F    V +V+C+  Y +  RL   +Y+
Sbjct:   46 PEDRFCGTYIIFFSLGIGSLLPWNFFITAKEYWMFKLRNSSSPATGEDPEGSDILNYFESYLAVASTVPSMLCLVANFLLVNRVAVHIRV--LASLTVILAIFMVITALVKVDTSSWTRGFFAVTIVCMVILSGASTVFSSSIYGMTGSFPMRNSQALISGGAMGGTVSAVASLVDLAASSD----VRNSALAFFLTATVFLVLCMGLYLLLSRLEYARYY 260          
The following BLAST results are available for this feature:
BLAST of CX671941 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 2
Match NameE-valueIdentityDescription
S29A3_BOVIN1.857e-1223.98Equilibrative nucleoside transporter 3 OS=Bos taur... [more]
S29A3_HUMAN4.137e-1225.79Equilibrative nucleoside transporter 3 OS=Homo sap... [more]
back to top
Properties
Property NameValue
Genbank descriptionUCRCS10_14A08_g Madame Vinous Sweet Orange Multiple Pathogen-Infected cDNA Library UCRCS10 Citrus sinensis cDNA clone UCRCS10-14A08-A16-5.g, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX671941 ID=CX671941; Name=CX671941; organism=Citrus sinensis; type=EST; length=785bp
CCAAAATACAGAATATCTCACAGCTTAGTATCACGTGAATCCCACCCACT
TCTGACTTCCCCCACCCCTTGCCGATGGGTCTGTCCGTAAAACCCGAACC
CGGATCGGAGTCCGAGTCCTCTCTTCTCCTCGGAAACTCAATAACTGTTC
ATCAGAAGCCGCCACCAGACACATTCCACCTGGCCTACATTATCTACTTC
ACCCTAGGCCTAGGCTTTTTACTTCCATGGAACGCCTTCATCACAGCCGT
CGATTACTTCTCCTACCTCTATCCAGAAGCATCCGTTGACCGCATCTTCG
CAGTCGCTTACATGCTCGTTGGCCTCTTCTGCCTCGTGATAATTGTGTTC
TACGCGCACAAATCGGATGCTTGGGTCAGAATCAACGTGGGCTTGGGCCT
GTTCGTGGTGGCTTTGCTTGTGGTGCCCGTTATGGACGCGGTTTATATCA
AGGGTCGGGTCGGGTTGTATGACGGGTTTACAGTAACGGTGGGGGCTGTT
GCGCTTTCAGGTTTGGCTGATGCGTTGGTCCAAGGTGGGTTGATTGGGGC
CGCTGGTGAGTTGCCTGACAGATACATGCAAGCTCTCGTTGCTGGCACTG
CTGGTTCTGGTGTGCTTGTTTCAGTTCTTCGAATCTTAACCAAAGCTGTA
TATACACAAGATGCAATTGGTCTGAGAAAAAGTGCAAACCTCTACTTTGC
AGTTGGGATTGTGGTTATGGTCATATGCATTGTCTTTTACAATGTGGCAC
ATAGACTTCCAGTCATTAAATACCATGAAGATCTG
back to top