CX671938
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of CX671938 vs. ExPASy Swiss-Prot
Match: GEM_ARATH (GLABRA2 expression modulator OS=Arabidopsis thaliana GN=GEM PE=1 SV=1) HSP 1 Score: 233.802 bits (595), Expect = 1.083e-60 Identity = 115/166 (69.28%), Postives = 135/166 (81.33%), Query Frame = 3 Query: 438 HWSPDLVTESHAPNTHNYQNTMPPIDGSNPYVAHTPAPPSNSFSFKDAVGSVKDVLGRWGKKVGEATKKAEDLAGNTWQHLKTSPSFADAAMGRIAQGTKVLAEGGYEKIFRQTFETVPEEQLQNSYACYLSTSAGPVMGILYVSTAKLAFCSDNPLSYKSSGQTE 935 HWSP+LV+ S P+ ++ GSNPY+A +PA S++ S KD + +VK VLGRWGK+V EA KK E LAGNTWQHL+T+PSFADAAMGRIAQ TKV AEGGYEKIFRQTFET PEEQL NS+ACYLSTSAGPVMG+LY+S+AKLA+CSDNPLSYK+ QTE Sbjct: 71 HWSPELVSGSQEPDQKAASSSSA---GSNPYIARSPAETSDA-SLKDTMETVKGVLGRWGKRVAEAAKKTESLAGNTWQHLRTAPSFADAAMGRIAQSTKVFAEGGYEKIFRQTFETDPEEQLLNSFACYLSTSAGPVMGVLYISSAKLAYCSDNPLSYKNGDQTE 232
BLAST of CX671938 vs. ExPASy Swiss-Prot
Match: GEML3_ARATH (Putative GEM-like protein 3 OS=Arabidopsis thaliana GN=At4g40100 PE=3 SV=2) HSP 1 Score: 199.904 bits (507), Expect = 1.733e-50 Identity = 105/157 (66.88%), Postives = 120/157 (76.43%), Query Frame = 3 Query: 438 HWSPDLVTESHAPNTHNYQNTMPPIDGSNPYVAHTPAPPSNSFSFKDAVGSVKDVLGRWGKKVGEATKKAEDLAGNTWQHLKTSPSFADAAMGRIAQGTKVLAEGGYEKIFRQTFETVPEEQLQNSYACYLSTSAGPVMGILYVSTAKLAFCSDNPL 908 HW+P+LV+ES AP+ ++ SNPYVA P S++ S K+ + SVK VLGRWG++VGEA KAE LAGNTWQH AAMGRIAQ TKVLAEGGYEKIFRQTFETVPEEQLQNS+ACYLSTSAGPVMG+LYVSTAKLA+CSD L Sbjct: 29 HWNPELVSESPAPDEKALSSSSAA--RSNPYVARAPTETSDA-SLKETMESVKGVLGRWGRRVGEAAMKAESLAGNTWQHPLR------AAMGRIAQSTKVLAEGGYEKIFRQTFETVPEEQLQNSFACYLSTSAGPVMGVLYVSTAKLAYCSDTSL 176
BLAST of CX671938 vs. ExPASy Swiss-Prot
Match: GEML1_ARATH (GEM-like protein 1 OS=Arabidopsis thaliana GN=FIP1 PE=1 SV=1) HSP 1 Score: 194.512 bits (493), Expect = 7.282e-49 Identity = 95/145 (65.52%), Postives = 115/145 (79.31%), Query Frame = 3 Query: 498 TMPPIDGSNPYVAHTPAPPSNSFSFKDAVGSVKDVLGRWGKKVGEATKKAEDLAGNTWQHLKTSPSFADAAMGRIAQGTKVLAEGGYEKIFRQTFETVPEEQLQNSYACYLSTSAGPVMGILYVSTAKLAFCSDNPLSYKSSGQT 932 TMP SNPYV+ +PAP ++ + SVKD LG+WGK +ATKKAEDLAGN WQHLKT PS ADAA+ RIAQGTK+LAEGGYEK+F+QTF+ +P+E+L +YACYLSTSAGPV+G++Y+ST KLAF SDNPLSYK QT Sbjct: 59 TMPA--ESNPYVSPSPAP-------RNTMDSVKDTLGKWGKMAADATKKAEDLAGNFWQHLKTGPSVADAAVSRIAQGTKILAEGGYEKVFKQTFDCLPDEKLLKTYACYLSTSAGPVLGVMYLSTHKLAFSSDNPLSYKEGEQT 194
BLAST of CX671938 vs. ExPASy Swiss-Prot
Match: GEML2_ARATH (GEM-like protein 2 OS=Arabidopsis thaliana GN=At4g01600 PE=2 SV=1) HSP 1 Score: 128.257 bits (321), Expect = 6.409e-29 Identity = 69/155 (44.52%), Postives = 98/155 (63.23%), Query Frame = 3 Query: 459 TESHAPNTHNYQNTMPPIDGSNPYVAHTPAPPSNSFSFKDAVGSVKDVLGRWGKKVGEATKKAEDLAGNTWQHLKTSPSFADAAMGRIAQGTKVLAEGGYEKIFRQTFETVPEEQLQNSYACYLSTSAGPVMGILYVSTAKLAFCSDNPLSYKSS 923 T H N+H + NPYV H +P S S K + V +VL R GKKV +AT+KAE L G HLK SPS +DAAM R++QGTK++ EGG E++F++ F + E+L +S+ CY+ST++GPV G++Y+S ++AFCSD + SS Sbjct: 15 TAKHKTNSHGGRY-------DNPYV-HITSP--TSASDKRSKDKVLEVLNRCGKKVEDATRKAEALVGGLKDHLKFSPSISDAAMARLSQGTKMIVEGGPERVFQREFGVLAVEKLLDSFVCYISTTSGPVTGVIYISNRRIAFCSDYAIRLPSS 159
BLAST of CX671938 vs. ExPASy Swiss-Prot
Match: GEML5_ARATH (GEM-like protein 5 OS=Arabidopsis thaliana GN=At5g13200 PE=1 SV=1) HSP 1 Score: 111.309 bits (277), Expect = 8.108e-24 Identity = 70/220 (31.82%), Postives = 108/220 (49.09%), Query Frame = 3 Query: 297 IVVGSESEKVSENENQAQPQNQIKIQLXXXXXXXXXXXXXXXXXXXXHWSPDLVTESHAPNTH-NYQNTMPPIDGSN------PYVAHTPAP-PSNSFSFKDAVGSVKDVLGRWGKKVGEATKKAEDLAGNTWQHLKTSPSFADAAMGRIAQGTKVLAEGGYEKIFRQTFETVPEEQLQNSYACYLSTSAGPVMGILYVSTAKLAFCSDNPLSYKS-SGQ 929 I++ E K E E+Q +P + Q W ++ AP H + Q + G N PYV ++P P+ + + +G + W ++KAE +A N W +LKT PS ++ A G++ K + +GG+E +FRQ F T P E L+ ++ACYLST+ GPV G +Y+S A++AFCSD PL + + SGQ Sbjct: 11 IIIDQEQPKTLETEHQPEPSSSSPDQ--------------------KKWGTHVMGAPAAPVAHPDNQQAAAWVAGDNQQTQYQPYVIYSPVEHPTTNNPLEPVIG----MFHTW-------SRKAETVARNLWHNLKTGPSMSETAWGKVNLTAKAITKGGFESLFRQIFGTEPNETLKKTFACYLSTTTGPVAGTVYLSNARVAFCSDRPLYFTAPSGQ 199
BLAST of CX671938 vs. ExPASy Swiss-Prot
Match: GEML8_ARATH (Putative GEM-like protein 8 OS=Arabidopsis thaliana GN=At5g23370 PE=3 SV=1) HSP 1 Score: 78.9518 bits (193), Expect = 4.459e-14 Identity = 41/124 (33.06%), Postives = 66/124 (53.23%), Query Frame = 3 Query: 549 PPSNSFSFKDAVGSVKDVLGRWGKKVGEATKKAEDLAGNTWQHLKTSPSFADAAMGRIAQGTKVLAEGGYEKIFRQTFETVPEEQLQNSYACYLSTSAGPVMGILYVSTAKLAFCSDNPLSYKS 920 P S+ FSF G K +L + KK + K P + +++ G ++L GG EKI+++ F+ EE+L +Y CYLST+AGP+ G+L++S+ K+AFCS+ + S Sbjct: 36 PTSSKFSF--LTGKGKSMLRK---------KKNDSFTNGVRDQDKLGPKLTETVKRKLSLGARILQMGGLEKIYKRLFKVSDEEKLFKAYQCYLSTTAGPIAGLLFISSKKIAFCSERSIKVAS 148
BLAST of CX671938 vs. ExPASy Swiss-Prot
Match: GEML6_ARATH (GEM-like protein 6 OS=Arabidopsis thaliana GN=At5g23350 PE=2 SV=2) HSP 1 Score: 77.7962 bits (190), Expect = 9.934e-14 Identity = 33/94 (35.11%), Postives = 55/94 (58.51%), Query Frame = 3 Query: 639 KKAEDLAGNTWQHLKTSPSFADAAMGRIAQGTKVLAEGGYEKIFRQTFETVPEEQLQNSYACYLSTSAGPVMGILYVSTAKLAFCSDNPLSYKS 920 KK + K P + +++ G K+L GG EKI+++ F+ +E+L +Y CYLST+AGP+ G+L++S+ K+AFCS+ + S Sbjct: 55 KKTDSFTNGARDQDKLGPKLTETVKRKLSLGAKILQMGGLEKIYKRLFKVCDQEKLFKAYQCYLSTTAGPIAGLLFISSKKIAFCSERSIKVAS 148
BLAST of CX671938 vs. ExPASy Swiss-Prot
Match: GEML4_ARATH (GEM-like protein 4 OS=Arabidopsis thaliana GN=At5g08350 PE=2 SV=1) HSP 1 Score: 77.411 bits (189), Expect = 1.297e-13 Identity = 45/136 (33.09%), Postives = 67/136 (49.26%), Query Frame = 3 Query: 531 VAHTPAPPS-NSF-----SFKDAVGSVKDVLGRWGKKVGEATKKAEDLAGNTWQHLKTSPSFADAAMGRIAQGTKVLAEGGYEKIFRQTFETVPEEQLQNSYACYLSTSAGPVMGILYVSTAKLAFCSDNPLSYKS 920 V + P P S N F S K +VK +L R KK + K P + +++ G ++L GG EKIF++ F E+L Y CYLST+AGP+ G+L++S+ K+AFCS+ + S Sbjct: 21 VGYLPDPASFNKFRVPASSKKSEQSNVKSILKR---------KKTDGFTNGVRDQSKIRPKLTETVKRKLSLGARILQVGGLEKIFKRLFRVSEGEKLFKMYQCYLSTTAGPIAGLLFISSKKMAFCSERSIKVDS 147
BLAST of CX671938 vs. ExPASy Swiss-Prot
Match: GEML7_ARATH (GEM-like protein 7 OS=Arabidopsis thaliana GN=At5g23360 PE=2 SV=1) HSP 1 Score: 72.4034 bits (176), Expect = 4.174e-12 Identity = 31/94 (32.98%), Postives = 53/94 (56.38%), Query Frame = 3 Query: 639 KKAEDLAGNTWQHLKTSPSFADAAMGRIAQGTKVLAEGGYEKIFRQTFETVPEEQLQNSYACYLSTSAGPVMGILYVSTAKLAFCSDNPLSYKS 920 KK + K P + +++ G K+L GG EKI+++ F+ +E+L +Y CYLST+ G + G+L++S+ K+AFCS+ + S Sbjct: 47 KKTDSFTNGARDQDKLGPKLTETVKRKLSLGAKILQMGGLEKIYKRLFKVCDKEKLFKAYQCYLSTTEGSIAGLLFISSKKIAFCSERSIKVTS 140 The following BLAST results are available for this feature:
BLAST of CX671938 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 9
Properties
Sequences
The
following sequences are available for this feature:
EST sequence >CX671938 ID=CX671938; Name=CX671938; organism=Citrus sinensis; type=EST; length=935bpback to top |